CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = V18L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B18V18LV3281LnonsynGtaTta1431330.9300710106-10108
ORF1ab/nsp5A-B18V18LV3281LnonsynGtaCta143100.069930110106-10108

Details of the mutation V18L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B18V18LGtaTta133143All0.000025
ORF1ab/nsp5A-B18V18LGtaCta10143All0.000002
ORF1ab/nsp5A-B18V18LGtaTta2929AY.40.000045
ORF1ab/nsp5A-B18V18LGtaTta1415B.1.1.70.000013
ORF1ab/nsp5A-B18V18LGtaCta115B.1.1.70.000001
ORF1ab/nsp5A-B18V18LGtaTta1213D.20.0009
ORF1ab/nsp5A-B18V18LGtaCta113D.20.000075
ORF1ab/nsp5A-B18V18LGtaTta1212B0.001534
ORF1ab/nsp5A-B18V18LGtaTta99B.1.617.20.000034
ORF1ab/nsp5A-B18V18LGtaTta77AY.30.00007
ORF1ab/nsp5A-B18V18LGtaTta55AY.440.00003
ORF1ab/nsp5A-B18V18LGtaTta55B.1.1.5190.000199
ORF1ab/nsp5A-B18V18LGtaTta44AY.330.000267
ORF1ab/nsp5A-B18V18LGtaTta44AY.430.000018
ORF1ab/nsp5A-B18V18LGtaTta44AY.470.000124
ORF1ab/nsp5A-B18V18LGtaTta33B.10.000027
ORF1ab/nsp5A-B18V18LGtaTta22AY.50.000041
ORF1ab/nsp5A-B18V18LGtaCta22B.1.5820.000981
ORF1ab/nsp5A-B18V18LGtaTta12P.1.140.000048
ORF1ab/nsp5A-B18V18LGtaCta12P.1.140.000048
ORF1ab/nsp5A-B18V18LGtaCta11A0.000387
ORF1ab/nsp5A-B18V18LGtaTta11A.10.000282
ORF1ab/nsp5A-B18V18LGtaTta11AY.1020.000027
ORF1ab/nsp5A-B18V18LGtaTta11AY.1030.000006
ORF1ab/nsp5A-B18V18LGtaCta11AY.1080.001103
ORF1ab/nsp5A-B18V18LGtaTta11AY.320.000532
ORF1ab/nsp5A-B18V18LGtaTta11AY.360.000148
ORF1ab/nsp5A-B18V18LGtaTta11AY.370.000316
ORF1ab/nsp5A-B18V18LGtaTta11AY.4.50.000107
ORF1ab/nsp5A-B18V18LGtaTta11AY.46.40.000165
ORF1ab/nsp5A-B18V18LGtaTta11AY.750.000056
ORF1ab/nsp5A-B18V18LGtaTta11AY.99.20.000092
ORF1ab/nsp5A-B18V18LGtaTta11B.1.10.000018
ORF1ab/nsp5A-B18V18LGtaTta11B.1.1.3110.000358
ORF1ab/nsp5A-B18V18LGtaTta11B.1.1.3370.003597
ORF1ab/nsp5A-B18V18LGtaCta11B.1.160.140.002119
ORF1ab/nsp5A-B18V18LGtaTta11B.1.177.230.003236
ORF1ab/nsp5A-B18V18LGtaTta11B.1.177.350.000691
ORF1ab/nsp5A-B18V18LGtaTta11B.1.177.70.000165
ORF1ab/nsp5A-B18V18LGtaCta11B.1.20.000009
ORF1ab/nsp5A-B18V18LGtaTta11B.1.3690.000285
ORF1ab/nsp5A-B18V18LGtaTta11B.1.4290.000024
ORF1ab/nsp5A-B18V18LGtaTta11B.1.4970.000315
ORF1ab/nsp5A-B18V18LGtaTta11B.1.5960.000087
ORF1ab/nsp5A-B18V18LGtaCta11B.1.617.10.000129
ORF1ab/nsp5A-B18V18LGtaTta11C.350.000774
ORF1ab/nsp5A-B18V18LGtaTta11P.20.000187