CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = T21N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B21T21NT3284NnonsynaCtaAt5050110115-10117

Details of the mutation T21N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B21T21NaCtaAt5050All0.00001
ORF1ab/nsp5A-B21T21NaCtaAt2020B.1.177.350.013822
ORF1ab/nsp5A-B21T21NaCtaAt33AY.30.00003
ORF1ab/nsp5A-B21T21NaCtaAt33AY.40.000005
ORF1ab/nsp5A-B21T21NaCtaAt33B.1.4040.003906
ORF1ab/nsp5A-B21T21NaCtaAt33B.1.617.20.000011
ORF1ab/nsp5A-B21T21NaCtaAt22B.1.1.70.000002
ORF1ab/nsp5A-B21T21NaCtaAt22B.1.4590.008163
ORF1ab/nsp5A-B21T21NaCtaAt22B.1.621.10.001012
ORF1ab/nsp5A-B21T21NaCtaAt11AY.290.000016
ORF1ab/nsp5A-B21T21NaCtaAt11AY.440.000006
ORF1ab/nsp5A-B21T21NaCtaAt11AY.470.000031
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.10.000018
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.1.3150.008475
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.1.670.004566
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.20.000009
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.4290.000024
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.5100.026316
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.5960.000087
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.6250.002353
ORF1ab/nsp5A-B21T21NaCtaAt11B.1.6280.000352