CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 21 | T21I | T3284I | nonsyn | aCt | aTt | 11765 | 11765 | 1 | 10115-10117 |
Details of the mutation T21I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 11765 | 11765 | All | 0.00225 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3237 | 3237 | B.1.1.318 | 0.976765 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1218 | 1218 | AZ.2 | 1 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1153 | 1153 | AZ.1 | 1 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1030 | 1030 | B.1.1.7 | 0.000922 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 817 | 817 | P.1 | 0.012871 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 658 | 658 | AZ.3 | 1 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 313 | 313 | AY.4 | 0.000487 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 302 | 302 | AY.103 | 0.001875 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 279 | 279 | AY.44 | 0.001698 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 271 | 271 | B.1.617.2 | 0.00102 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 253 | 253 | AY.25 | 0.001522 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 151 | 151 | AY.95 | 0.114916 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 134 | 134 | B.1.2 | 0.00118 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 122 | 122 | AZ.2.1 | 0.99187 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 119 | 119 | AZ.6 | 1 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 116 | 116 | AY.20 | 0.004508 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 94 | 94 | B.1 | 0.000861 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 80 | 80 | AY.3 | 0.000796 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 65 | 65 | AY.43 | 0.000288 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 65 | 65 | B.1.351 | 0.001932 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 59 | 59 | B.1.526 | 0.001387 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 56 | 56 | AY.99.2 | 0.005161 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 51 | 51 | B.1.1 | 0.000925 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 46 | 46 | B.1.525 | 0.005205 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 45 | 45 | AY.118 | 0.002819 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 35 | 35 | B.1.429 | 0.000824 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 32 | 32 | AY.39 | 0.000791 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 27 | 27 | AY.26 | 0.000764 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 26 | 26 | AY.46.6 | 0.001877 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 25 | 25 | B.1.243 | 0.00174 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 25 | 25 | B.1.265 | 0.031766 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 24 | 24 | AY.4.2 | 0.000521 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 24 | 24 | B.1.617.1 | 0.003095 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 23 | 23 | C.37 | 0.002669 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 21 | 21 | AY.119 | 0.000741 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 21 | 21 | AY.75 | 0.001176 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 18 | 18 | B.1.221 | 0.001279 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 18 | 18 | P.1.14 | 0.00086 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 17 | 17 | AY.46 | 0.001769 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 17 | 17 | AY.47 | 0.000529 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 17 | 17 | R.1 | 0.00153 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 16 | 16 | B.1.561 | 0.006352 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 15 | 15 | B.1.1.519 | 0.000596 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 15 | 15 | B.1.311 | 0.004119 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 14 | 14 | AY.101 | 0.006866 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 14 | 14 | AY.34 | 0.001358 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 14 | 14 | P.2 | 0.002613 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 13 | 13 | AY.116.1 | 0.004049 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 12 | 12 | AY.113 | 0.001709 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 12 | 12 | AY.114 | 0.002773 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 12 | 12 | AY.29 | 0.000189 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 11 | 11 | B.1.427 | 0.000555 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 11 | 11 | B.1.639 | 0.23913 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 11 | 11 | P.1.12 | 0.005324 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 11 | 11 | P.1.15 | 0.002556 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | AY.100 | 0.00046 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | AY.42 | 0.000402 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | B.1.177 | 0.000132 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | B.1.177.21 | 0.000765 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | B.1.232 | 0.005373 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | B.1.510 | 0.263158 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 10 | 10 | B.1.637 | 0.000731 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 9 | 9 | AY.27 | 0.000582 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 9 | 9 | B.1.177.81 | 0.001704 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 9 | 9 | B.1.258.17 | 0.000936 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 9 | 9 | P.1.7 | 0.002874 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | AY.33 | 0.000534 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | AY.45 | 0.000973 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | B.1.1.28 | 0.00249 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | B.1.1.374 | 0.019002 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 8 | 8 | B.1.177.4 | 0.001688 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 7 | 7 | B.1.258 | 0.000466 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 7 | 7 | Q.1 | 0.000884 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | AT.1 | 0.030769 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | AY.120 | 0.000223 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | AY.39.1 | 0.000238 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | AY.9.1 | 0.000502 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | B.1.36.31 | 0.010508 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 6 | 6 | P.1.1 | 0.001906 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | B.1.1.222 | 0.00102 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | B.1.276 | 0.084746 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | B.1.470 | 0.007022 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | B.1.626 | 0.028571 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 5 | 5 | Q.8 | 0.000825 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.110 | 0.000451 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.3.1 | 0.000341 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.48 | 0.00186 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.5 | 0.000083 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.6 | 0.000165 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.77 | 0.00451 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.1.412 | 0.030534 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.1.515 | 0.08 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.241 | 0.003247 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.396 | 0.002823 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.623 | 0.002146 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | B.1.631 | 0.013468 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 4 | 4 | Q.3 | 0.00058 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | A.2.5 | 0.001497 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | A.23.1 | 0.002113 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | AY.9.2 | 0.00011 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | B.1.258.10 | 0.034091 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | B.1.36.18 | 0.001261 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | B.1.576 | 0.00272 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.107 | 0.000932 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.13 | 0.000322 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.38 | 0.000999 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.55 | 0.001835 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.81 | 0.003984 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.128 | 0.014184 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.142 | 0.035088 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.319 | 0.035088 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.434 | 0.000697 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.528 | 0.009615 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.1.95 | 0.039216 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.214.2 | 0.001199 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.240 | 0.000431 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | B.1.621.1 | 0.001012 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | C.38 | 0.016129 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | L.1 | 0.00381 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | N.5 | 0.003534 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AK.1 | 0.012658 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | AZ.5 | 0.003509 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B | 0.000128 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.187 | 0.00885 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.228 | 0.003049 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.255 | 0.00303 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.258 | 0.003257 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.361 | 0.045455 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.1.429 | 0.004608 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.146 | 0.004237 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.177.80 | 0.001912 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.214.3 | 0.007143 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.319 | 0.003049 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.36.7 | 0.004 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.456 | 0.003268 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.70 | 0.02439 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | P.1.4 | 0.000977 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | P.6 | 0.003145 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | Q.7 | 0.001111 |
ORF1ab/nsp5A-B | 21 | T21I | aCt | aTt | 1 | 1 | Z.1 | 0.00289 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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