CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = T196del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B196T196del1T3459del1delacGac-530.610640-10642
ORF1ab/nsp5A-B196T196del1T3459del1delaCga-g510.210640-10642
ORF1ab/nsp5A-B196T196del1T3459del1delAcg-cg510.210640-10642

Details of the mutation T196del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B196T196del1acGac-35All0.000001
ORF1ab/nsp5A-B196T196del1aCga-g15All0
ORF1ab/nsp5A-B196T196del1Acg-cg15All0
ORF1ab/nsp5A-B196T196del1Acg-cg11AY.1200.000037
ORF1ab/nsp5A-B196T196del1acGac-11B0.000128
ORF1ab/nsp5A-B196T196del1acGac-11B.1.177.40.000211
ORF1ab/nsp5A-B196T196del1acGac-11B.1.2210.000071
ORF1ab/nsp5A-B196T196del1aCga-g11B.1.617.30.002985