CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = R105H

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B105R105HR3368HnonsyncGccAc3973960.99748110367-10369
ORF1ab/nsp5A-B105R105HR3368HnonsyncGCcAT39710.0025188910367-10369

Details of the mutation R105H within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B105R105HcGccAc396397All0.000076
ORF1ab/nsp5A-B105R105HcGCcAT1397All0
ORF1ab/nsp5A-B105R105HcGccAc6565B.1.177.820.031026
ORF1ab/nsp5A-B105R105HcGccAc4444AY.40.000068
ORF1ab/nsp5A-B105R105HcGccAc4343AY.250.000259
ORF1ab/nsp5A-B105R105HcGccAc3333B.1.617.20.000124
ORF1ab/nsp5A-B105R105HcGccAc2323B.1.20.000203
ORF1ab/nsp5A-B105R105HcGccAc1717B.10.000156
ORF1ab/nsp5A-B105R105HcGccAc1616B.1.1.70.000014
ORF1ab/nsp5A-B105R105HcGccAc1414B.1.177.350.009675
ORF1ab/nsp5A-B105R105HcGccAc1212B.1.1770.000158
ORF1ab/nsp5A-B105R105HcGccAc1010AY.1030.000062
ORF1ab/nsp5A-B105R105HcGccAc88B.1.1.5190.000318
ORF1ab/nsp5A-B105R105HcGccAc77AY.4.20.000152
ORF1ab/nsp5A-B105R105HcGccAc77AY.430.000031
ORF1ab/nsp5A-B105R105HcGccAc66AY.30.00006
ORF1ab/nsp5A-B105R105HcGccAc66B.1.177.420.005367
ORF1ab/nsp5A-B105R105HcGccAc44AY.390.000099
ORF1ab/nsp5A-B105R105HcGccAc44B.1.6370.000292
ORF1ab/nsp5A-B105R105HcGccAc33AY.1020.00008
ORF1ab/nsp5A-B105R105HcGccAc33AY.440.000018
ORF1ab/nsp5A-B105R105HcGccAc33B.1.110.30.002155
ORF1ab/nsp5A-B105R105HcGccAc33B.1.2210.000213
ORF1ab/nsp5A-B105R105HcGccAc33B.1.258.170.000312
ORF1ab/nsp5A-B105R105HcGccAc33B.1.360.000438
ORF1ab/nsp5A-B105R105HcGccAc33B.1.4290.000071
ORF1ab/nsp5A-B105R105HcGccAc22AY.330.000134
ORF1ab/nsp5A-B105R105HcGccAc22AY.460.000208
ORF1ab/nsp5A-B105R105HcGccAc22AY.890.009804
ORF1ab/nsp5A-B105R105HcGccAc22AY.9.10.000167
ORF1ab/nsp5A-B105R105HcGccAc22AY.99.20.000184
ORF1ab/nsp5A-B105R105HcGccAc22B.1.177.120.000303
ORF1ab/nsp5A-B105R105HcGccAc22B.1.30.005236
ORF1ab/nsp5A-B105R105HcGccAc22B.1.36.10.002281
ORF1ab/nsp5A-B105R105HcGccAc22B.1.4590.008163
ORF1ab/nsp5A-B105R105HcGccAc22B.1.466.20.000782
ORF1ab/nsp5A-B105R105HcGccAc22B.1.617.10.000258
ORF1ab/nsp5A-B105R105HcGccAc11A.50.001923
ORF1ab/nsp5A-B105R105HcGccAc11AY.1000.000046
ORF1ab/nsp5A-B105R105HcGccAc11AY.1190.000035
ORF1ab/nsp5A-B105R105HcGccAc11AY.1210.000135
ORF1ab/nsp5A-B105R105HcGccAc11AY.260.000028
ORF1ab/nsp5A-B105R105HcGccAc11AY.290.000016
ORF1ab/nsp5A-B105R105HcGccAc11AY.3.10.000085
ORF1ab/nsp5A-B105R105HcGccAc11AY.420.00004
ORF1ab/nsp5A-B105R105HcGccAc11AY.450.000122
ORF1ab/nsp5A-B105R105HcGccAc11AY.470.000031
ORF1ab/nsp5A-B105R105HcGccAc11AY.50.000021
ORF1ab/nsp5A-B105R105HcGccAc11AY.70.000196
ORF1ab/nsp5A-B105R105HcGccAc11AY.750.000056
ORF1ab/nsp5A-B105R105HcGccAc11AY.9.20.000037
ORF1ab/nsp5A-B105R105HcGccAc11AY.980.000079
ORF1ab/nsp5A-B105R105HcGccAc11B.1.10.000018
ORF1ab/nsp5A-B105R105HcGccAc11B.1.1.2160.00089
ORF1ab/nsp5A-B105R105HcGccAc11B.1.1.2290.005747
ORF1ab/nsp5A-B105R105HcGccAc11B.1.1.3870.058824
ORF1ab/nsp5A-B105R105HcGccAc11B.1.1.390.00051
ORF1ab/nsp5A-B105R105HcGccAc11B.1.1600.000031
ORF1ab/nsp5A-B105R105HcGCcAT11B.1.160.80.001289
ORF1ab/nsp5A-B105R105HcGccAc11B.1.177.40.000211
ORF1ab/nsp5A-B105R105HcGccAc11B.1.2340.000132
ORF1ab/nsp5A-B105R105HcGccAc11B.1.2470.014925
ORF1ab/nsp5A-B105R105HcGccAc11B.1.4650.003802
ORF1ab/nsp5A-B105R105HcGccAc11B.1.5050.004386
ORF1ab/nsp5A-B105R105HcGccAc11B.1.5820.000491
ORF1ab/nsp5A-B105R105HcGccAc11B.1.5970.00463
ORF1ab/nsp5A-B105R105HcGccAc11B.1.6280.000352
ORF1ab/nsp5A-B105R105HcGccAc11C.90.030303
ORF1ab/nsp5A-B105R105HcGccAc11D.20.000075
ORF1ab/nsp5A-B105R105HcGccAc11N.30.005814
ORF1ab/nsp5A-B105R105HcGccAc11P.10.000016
ORF1ab/nsp5A-B105R105HcGccAc11R.10.00009