CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P96T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B96P96TP3359TnonsynCctAct1161150.99137910340-10342
ORF1ab/nsp5A-B96P96TP3359TnonsynCcTAcA11610.0086206910340-10342

Details of the mutation P96T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B96P96TCctAct115116All0.000022
ORF1ab/nsp5A-B96P96TCcTAcA1116All0
ORF1ab/nsp5A-B96P96TCctAct8181P.1.170.013103
ORF1ab/nsp5A-B96P96TCctAct77AY.30.00007
ORF1ab/nsp5A-B96P96TCctAct55AY.440.00003
ORF1ab/nsp5A-B96P96TCctAct33AY.250.000018
ORF1ab/nsp5A-B96P96TCctAct23AY.430.000009
ORF1ab/nsp5A-B96P96TCcTAcA13AY.430.000004
ORF1ab/nsp5A-B96P96TCctAct33P.10.000047
ORF1ab/nsp5A-B96P96TCctAct22B.1.1.460.008734
ORF1ab/nsp5A-B96P96TCctAct22B.1.1.70.000002
ORF1ab/nsp5A-B96P96TCctAct22B.1.617.20.000008
ORF1ab/nsp5A-B96P96TCctAct11AY.1140.000231
ORF1ab/nsp5A-B96P96TCctAct11AY.1200.000037
ORF1ab/nsp5A-B96P96TCctAct11AY.20.000356
ORF1ab/nsp5A-B96P96TCctAct11B.10.000009
ORF1ab/nsp5A-B96P96TCctAct11B.1.4270.00005
ORF1ab/nsp5A-B96P96TCctAct11B.1.617.10.000129
ORF1ab/nsp5A-B96P96TCctAct11B.600.015873
ORF1ab/nsp5A-B96P96TCctAct11P.1.17.10.000875