CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P96P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B96P96PP3359PsynccTccC1571330.84713410340-10342
ORF1ab/nsp5A-B96P96PP3359PsynccTccA157230.14649710340-10342
ORF1ab/nsp5A-B96P96PP3359PsynccTccG15710.0063694310340-10342

Details of the mutation P96P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B96P96PccTccC133157All0.000025
ORF1ab/nsp5A-B96P96PccTccA23157All0.000004
ORF1ab/nsp5A-B96P96PccTccG1157All0
ORF1ab/nsp5A-B96P96PccTccC3636B.1.617.20.000136
ORF1ab/nsp5A-B96P96PccTccC2123AY.430.000093
ORF1ab/nsp5A-B96P96PccTccA223AY.430.000009
ORF1ab/nsp5A-B96P96PccTccA1921B.1.1.70.000017
ORF1ab/nsp5A-B96P96PccTccG121B.1.1.70.000001
ORF1ab/nsp5A-B96P96PccTccC121B.1.1.70.000001
ORF1ab/nsp5A-B96P96PccTccC1616AY.1030.000099
ORF1ab/nsp5A-B96P96PccTccC1212AY.1020.000318
ORF1ab/nsp5A-B96P96PccTccC78AY.40.000011
ORF1ab/nsp5A-B96P96PccTccA18AY.40.000002
ORF1ab/nsp5A-B96P96PccTccC77AY.1180.000439
ORF1ab/nsp5A-B96P96PccTccC44AY.1130.00057
ORF1ab/nsp5A-B96P96PccTccC44AY.140.000352
ORF1ab/nsp5A-B96P96PccTccC44D.20.0003
ORF1ab/nsp5A-B96P96PccTccC33AY.390.000074
ORF1ab/nsp5A-B96P96PccTccC33B.1.20.000026
ORF1ab/nsp5A-B96P96PccTccC22AY.230.000139
ORF1ab/nsp5A-B96P96PccTccC22AY.370.000632
ORF1ab/nsp5A-B96P96PccTccC22B.1.3670.001585
ORF1ab/nsp5A-B96P96PccTccC110.055556
ORF1ab/nsp5A-B96P96PccTccC11AY.1000.000046
ORF1ab/nsp5A-B96P96PccTccC11AY.1170.000085
ORF1ab/nsp5A-B96P96PccTccC11AY.340.000097
ORF1ab/nsp5A-B96P96PccTccC11AY.39.10.00004
ORF1ab/nsp5A-B96P96PccTccC11AY.9.10.000084
ORF1ab/nsp5A-B96P96PccTccC11AY.950.000761
ORF1ab/nsp5A-B96P96PccTccC11AY.980.000079
ORF1ab/nsp5A-B96P96PccTccC11B.1.1.2220.000204
ORF1ab/nsp5A-B96P96PccTccA11B.1.1770.000013