CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P241T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B241P241TP3504TnonsynCctAct61590.96721310775-10777
ORF1ab/nsp5A-B241P241TP3504TnonsynCcTAcC6120.032786910775-10777

Details of the mutation P241T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B241P241TCctAct5961All0.000011
ORF1ab/nsp5A-B241P241TCcTAcC261All0
ORF1ab/nsp5A-B241P241TCctAct1010AY.40.000016
ORF1ab/nsp5A-B241P241TCctAct77AY.46.40.001152
ORF1ab/nsp5A-B241P241TCctAct34AY.440.000018
ORF1ab/nsp5A-B241P241TCcTAcC14AY.440.000006
ORF1ab/nsp5A-B241P241TCctAct44B.1.1.70.000004
ORF1ab/nsp5A-B241P241TCctAct44B.390.009324
ORF1ab/nsp5A-B241P241TCctAct44P.10.000063
ORF1ab/nsp5A-B241P241TCctAct33AY.200.000117
ORF1ab/nsp5A-B241P241TCctAct33C.370.000348
ORF1ab/nsp5A-B241P241TCctAct33P.1.40.00293
ORF1ab/nsp5A-B241P241TCctAct22AY.1190.000071
ORF1ab/nsp5A-B241P241TCctAct22AY.250.000012
ORF1ab/nsp5A-B241P241TCcTAcC12B.10.000009
ORF1ab/nsp5A-B241P241TCctAct12B.10.000009
ORF1ab/nsp5A-B241P241TCctAct22B.1.10.000036
ORF1ab/nsp5A-B241P241TCctAct22P.1.70.000639
ORF1ab/nsp5A-B241P241TCctAct11AY.1180.000063
ORF1ab/nsp5A-B241P241TCctAct11AY.470.000031
ORF1ab/nsp5A-B241P241TCctAct11AY.90.000068
ORF1ab/nsp5A-B241P241TCctAct11B.1.177.570.000281
ORF1ab/nsp5A-B241P241TCctAct11B.1.3380.008621
ORF1ab/nsp5A-B241P241TCctAct11B.1.4270.00005
ORF1ab/nsp5A-B241P241TCctAct11B.1.4740.001901
ORF1ab/nsp5A-B241P241TCctAct11B.1.617.20.000004
ORF1ab/nsp5A-B241P241TCctAct11L.10.001905