CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P241S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B241P241SP3504SnonsynCctTct435043480.9995410775-10777
ORF1ab/nsp5A-B241P241SP3504SnonsynCcTTcC435010.00022988510775-10777
ORF1ab/nsp5A-B241P241SP3504SnonsynCcTTcA435010.00022988510775-10777

Details of the mutation P241S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B241P241SCctTct43484350All0.000832
ORF1ab/nsp5A-B241P241SCcTTcC14350All0
ORF1ab/nsp5A-B241P241SCcTTcA14350All0
ORF1ab/nsp5A-B241P241SCctTct32673267B.1.5260.076789
ORF1ab/nsp5A-B241P241SCctTct424424B.1.6250.997647
ORF1ab/nsp5A-B241P241SCctTct225225B.1.1.70.000201
ORF1ab/nsp5A-B241P241SCctTct5555AY.40.000086
ORF1ab/nsp5A-B241P241SCctTct3838B.1.10.000689
ORF1ab/nsp5A-B241P241SCctTct3535B.1.617.20.000132
ORF1ab/nsp5A-B241P241SCctTct2627B.10.000238
ORF1ab/nsp5A-B241P241SCcTTcC127B.10.000009
ORF1ab/nsp5A-B241P241SCctTct2525B.1.4970.007869
ORF1ab/nsp5A-B241P241SCctTct2122AY.430.000093
ORF1ab/nsp5A-B241P241SCcTTcA122AY.430.000004
ORF1ab/nsp5A-B241P241SCctTct1717AY.1030.000106
ORF1ab/nsp5A-B241P241SCctTct1313B.1.20.000114
ORF1ab/nsp5A-B241P241SCctTct1212AY.250.000072
ORF1ab/nsp5A-B241P241SCctTct1212P.10.000189
ORF1ab/nsp5A-B241P241SCctTct1111AY.440.000067
ORF1ab/nsp5A-B241P241SCctTct99B.1.2580.000599
ORF1ab/nsp5A-B241P241SCctTct66AY.30.00006
ORF1ab/nsp5A-B241P241SCctTct66B.1.1280.003812
ORF1ab/nsp5A-B241P241SCctTct66B.1.2140.021978
ORF1ab/nsp5A-B241P241SCctTct66B.1.3510.000178
ORF1ab/nsp5A-B241P241SCctTct66B.1.360.000875
ORF1ab/nsp5A-B241P241SCctTct66B.1.4270.000303
ORF1ab/nsp5A-B241P241SCctTct55AY.230.000349
ORF1ab/nsp5A-B241P241SCctTct55AY.4.20.000108
ORF1ab/nsp5A-B241P241SCctTct55B.1.4290.000118
ORF1ab/nsp5A-B241P241SCctTct55D.20.000375
ORF1ab/nsp5A-B241P241SCctTct44AY.390.000099
ORF1ab/nsp5A-B241P241SCctTct44AY.7.10.000451
ORF1ab/nsp5A-B241P241SCctTct44P.1.140.000191
ORF1ab/nsp5A-B241P241SCctTct33B.1.351.20.000908
ORF1ab/nsp5A-B241P241SCctTct33N.40.012766
ORF1ab/nsp5A-B241P241SCctTct33P.1.130.002695
ORF1ab/nsp5A-B241P241SCctTct33Q.80.000495
ORF1ab/nsp5A-B241P241SCctTct22AY.1000.000092
ORF1ab/nsp5A-B241P241SCctTct22AY.1190.000071
ORF1ab/nsp5A-B241P241SCctTct22AY.140.000176
ORF1ab/nsp5A-B241P241SCctTct22AY.200.000078
ORF1ab/nsp5A-B241P241SCctTct22AY.260.000057
ORF1ab/nsp5A-B241P241SCctTct22AY.270.000129
ORF1ab/nsp5A-B241P241SCctTct22AY.450.000243
ORF1ab/nsp5A-B241P241SCctTct22AY.470.000062
ORF1ab/nsp5A-B241P241SCctTct22AY.510.001818
ORF1ab/nsp5A-B241P241SCctTct22AY.9.20.000073
ORF1ab/nsp5A-B241P241SCctTct22B.1.1.2140.000111
ORF1ab/nsp5A-B241P241SCctTct22B.1.1.3490.020619
ORF1ab/nsp5A-B241P241SCctTct22B.1.110.30.001437
ORF1ab/nsp5A-B241P241SCctTct22B.1.1770.000026
ORF1ab/nsp5A-B241P241SCctTct22B.1.177.730.001133
ORF1ab/nsp5A-B241P241SCctTct22B.1.214.20.001199
ORF1ab/nsp5A-B241P241SCctTct22B.1.5600.009259
ORF1ab/nsp5A-B241P241SCctTct22B.1.5960.000174
ORF1ab/nsp5A-B241P241SCctTct22B.1.6210.000177
ORF1ab/nsp5A-B241P241SCctTct11A0.000387
ORF1ab/nsp5A-B241P241SCctTct11A.230.010526
ORF1ab/nsp5A-B241P241SCctTct11A.23.10.000704
ORF1ab/nsp5A-B241P241SCctTct11AY.1020.000027
ORF1ab/nsp5A-B241P241SCctTct11AY.1140.000231
ORF1ab/nsp5A-B241P241SCctTct11AY.1200.000037
ORF1ab/nsp5A-B241P241SCctTct11AY.130.000161
ORF1ab/nsp5A-B241P241SCctTct11AY.290.000016
ORF1ab/nsp5A-B241P241SCctTct11AY.39.10.00004
ORF1ab/nsp5A-B241P241SCctTct11AY.4.2.10.000149
ORF1ab/nsp5A-B241P241SCctTct11AY.420.00004
ORF1ab/nsp5A-B241P241SCctTct11AY.46.20.000635
ORF1ab/nsp5A-B241P241SCctTct11AY.46.60.000072
ORF1ab/nsp5A-B241P241SCctTct11AY.5.40.000277
ORF1ab/nsp5A-B241P241SCctTct11AY.540.000095
ORF1ab/nsp5A-B241P241SCctTct11AY.590.00053
ORF1ab/nsp5A-B241P241SCctTct11AY.610.000105
ORF1ab/nsp5A-B241P241SCctTct11AY.680.000274
ORF1ab/nsp5A-B241P241SCctTct11AY.700.000209
ORF1ab/nsp5A-B241P241SCctTct11AY.750.000056
ORF1ab/nsp5A-B241P241SCctTct11AY.850.000427
ORF1ab/nsp5A-B241P241SCctTct11B.1.1.3720.000689
ORF1ab/nsp5A-B241P241SCctTct11B.1.1.4320.001266
ORF1ab/nsp5A-B241P241SCctTct11B.1.1600.000031
ORF1ab/nsp5A-B241P241SCctTct11B.1.160.140.002119
ORF1ab/nsp5A-B241P241SCctTct11B.1.177.570.000281
ORF1ab/nsp5A-B241P241SCctTct11B.1.177.650.000665
ORF1ab/nsp5A-B241P241SCctTct11B.1.3360.002439
ORF1ab/nsp5A-B241P241SCctTct11B.1.36.160.001425
ORF1ab/nsp5A-B241P241SCctTct11B.1.3960.000706
ORF1ab/nsp5A-B241P241SCctTct11B.1.5770.000687
ORF1ab/nsp5A-B241P241SCctTct11B.1.5800.004065
ORF1ab/nsp5A-B241P241SCctTct11B.1.5900.004545
ORF1ab/nsp5A-B241P241SCctTct11B.1.6090.000479
ORF1ab/nsp5A-B241P241SCctTct11B.1.6190.000871
ORF1ab/nsp5A-B241P241SCctTct11B.40.002208
ORF1ab/nsp5A-B241P241SCctTct11C.180.002591
ORF1ab/nsp5A-B241P241SCctTct11P.1.150.000232
ORF1ab/nsp5A-B241P241SCctTct11P.1.70.000319
ORF1ab/nsp5A-B241P241SCctTct11P.60.003145