CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P241L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B241P241LP3504LnonsyncCtcTt357535730.99944110775-10777
ORF1ab/nsp5A-B241P241LP3504LnonsyncCTcTC357520.00055944110775-10777

Details of the mutation P241L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B241P241LcCtcTt35733575All0.000683
ORF1ab/nsp5A-B241P241LcCTcTC23575All0
ORF1ab/nsp5A-B241P241LcCtcTt17491749B.1.1.70.001566
ORF1ab/nsp5A-B241P241LcCtcTt333333P.1.70.106322
ORF1ab/nsp5A-B241P241LcCtcTt298298P.10.004695
ORF1ab/nsp5A-B241P241LcCtcTt121121AY.590.064089
ORF1ab/nsp5A-B241P241LcCtcTt115115B.1.3510.003419
ORF1ab/nsp5A-B241P241LcCtcTt6666AY.1030.00041
ORF1ab/nsp5A-B241P241LcCtcTt5353B.1.20.000467
ORF1ab/nsp5A-B241P241LcCtcTt5252B.1.258.170.005407
ORF1ab/nsp5A-B241P241LcCtcTt4848B.10.00044
ORF1ab/nsp5A-B241P241LcCtcTt4040AY.200.001555
ORF1ab/nsp5A-B241P241LcCtcTt3737B.1.617.20.000139
ORF1ab/nsp5A-B241P241LcCtcTt3636AY.99.20.003318
ORF1ab/nsp5A-B241P241LcCtcTt3535AY.40.000054
ORF1ab/nsp5A-B241P241LcCtcTt3031AY.440.000183
ORF1ab/nsp5A-B241P241LcCTcTC131AY.440.000006
ORF1ab/nsp5A-B241P241LcCtcTt2828B.1.4270.001414
ORF1ab/nsp5A-B241P241LcCtcTt2828B.1.5260.000658
ORF1ab/nsp5A-B241P241LcCtcTt2727C.370.003134
ORF1ab/nsp5A-B241P241LcCtcTt2323B.1.596.10.214953
ORF1ab/nsp5A-B241P241LcCtcTt2222B.1.10.000399
ORF1ab/nsp5A-B241P241LcCtcTt2121B.1.5250.002376
ORF1ab/nsp5A-B241P241LcCtcTt1616P.1.140.000765
ORF1ab/nsp5A-B241P241LcCtcTt1515AY.420.000603
ORF1ab/nsp5A-B241P241LcCtcTt1414AY.430.000062
ORF1ab/nsp5A-B241P241LcCtcTt1212AY.130.001932
ORF1ab/nsp5A-B241P241LcCtcTt1212AY.260.00034
ORF1ab/nsp5A-B241P241LcCtcTt1111B.1.5510.014194
ORF1ab/nsp5A-B241P241LcCtcTt1111P.1.150.002556
ORF1ab/nsp5A-B241P241LcCtcTt1010AY.250.00006
ORF1ab/nsp5A-B241P241LcCtcTt1010B.1.2580.000665
ORF1ab/nsp5A-B241P241LcCtcTt99AY.240.003879
ORF1ab/nsp5A-B241P241LcCtcTt99AY.450.001095
ORF1ab/nsp5A-B241P241LcCtcTt99B.1.258.240.096774
ORF1ab/nsp5A-B241P241LcCtcTt99B.1.4290.000212
ORF1ab/nsp5A-B241P241LcCtcTt99P.1.120.004356
ORF1ab/nsp5A-B241P241LcCtcTt88AY.470.000249
ORF1ab/nsp5A-B241P241LcCtcTt88B.1.1770.000105
ORF1ab/nsp5A-B241P241LcCtcTt88B.1.6370.000585
ORF1ab/nsp5A-B241P241LcCtcTt77B.1.3690.001997
ORF1ab/nsp5A-B241P241LcCtcTt77P.1.170.001132
ORF1ab/nsp5A-B241P241LcCtcTt77Q.30.001015
ORF1ab/nsp5A-B241P241LcCtcTt77Q.80.001154
ORF1ab/nsp5A-B241P241LcCtcTt66AY.1020.000159
ORF1ab/nsp5A-B241P241LcCtcTt66P.1.160.002245
ORF1ab/nsp5A-B241P241LcCtcTt66Q.40.002729
ORF1ab/nsp5A-B241P241LcCtcTt55A.10.001409
ORF1ab/nsp5A-B241P241LcCtcTt55AY.1110.000916
ORF1ab/nsp5A-B241P241LcCtcTt55AY.30.00005
ORF1ab/nsp5A-B241P241LcCtcTt55AY.390.000124
ORF1ab/nsp5A-B241P241LcCtcTt55AY.9.20.000184
ORF1ab/nsp5A-B241P241LcCtcTt55B.1.177.70.000824
ORF1ab/nsp5A-B241P241LcCtcTt55B.1.5960.000436
ORF1ab/nsp5A-B241P241LcCtcTt44AY.1000.000184
ORF1ab/nsp5A-B241P241LcCtcTt44AY.50.000083
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.1.5190.000159
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.243.10.088889
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.36.380.006568
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.619.10.002566
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.6270.008081
ORF1ab/nsp5A-B241P241LcCtcTt33A.270.004967
ORF1ab/nsp5A-B241P241LcCtcTt33AY.1190.000106
ORF1ab/nsp5A-B241P241LcCtcTt33AY.1200.000112
ORF1ab/nsp5A-B241P241LcCtcTt33AY.290.000047
ORF1ab/nsp5A-B241P241LcCtcTt33AY.330.0002
ORF1ab/nsp5A-B241P241LcCtcTt33AY.610.000314
ORF1ab/nsp5A-B241P241LcCtcTt33AY.740.000347
ORF1ab/nsp5A-B241P241LcCtcTt33AY.950.002283
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.1.280.000934
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.36.290.001552
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.36.310.005254
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.617.10.000387
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.6210.000266
ORF1ab/nsp5A-B241P241LcCtcTt33Q.70.003333
ORF1ab/nsp5A-B241P241LcCtcTt22A.2.50.000998
ORF1ab/nsp5A-B241P241LcCtcTt22AY.1010.000981
ORF1ab/nsp5A-B241P241LcCtcTt22AY.230.000139
ORF1ab/nsp5A-B241P241LcCtcTt22AY.5.40.000553
ORF1ab/nsp5A-B241P241LcCtcTt22AY.980.000158
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.1.2650.006309
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.177.210.000153
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.2210.000142
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.4990.002101
ORF1ab/nsp5A-B241P241LcCtcTt22C.350.001548
ORF1ab/nsp5A-B241P241LcCTcTC12D.20.000075
ORF1ab/nsp5A-B241P241LcCtcTt12D.20.000075
ORF1ab/nsp5A-B241P241LcCtcTt22P.1.20.002312
ORF1ab/nsp5A-B241P241LcCtcTt22P.1.60.003891
ORF1ab/nsp5A-B241P241LcCtcTt22R.10.00018
ORF1ab/nsp5A-B241P241LcCtcTt11A0.000387
ORF1ab/nsp5A-B241P241LcCtcTt11AV.10.005051
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1050.000643
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1170.000085
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1180.000063
ORF1ab/nsp5A-B241P241LcCtcTt11AY.160.00038
ORF1ab/nsp5A-B241P241LcCtcTt11AY.340.000097
ORF1ab/nsp5A-B241P241LcCtcTt11AY.380.000499
ORF1ab/nsp5A-B241P241LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp5A-B241P241LcCtcTt11AY.4.50.000107
ORF1ab/nsp5A-B241P241LcCtcTt11AY.46.40.000165
ORF1ab/nsp5A-B241P241LcCtcTt11AY.530.000288
ORF1ab/nsp5A-B241P241LcCtcTt11AY.540.000095
ORF1ab/nsp5A-B241P241LcCtcTt11AY.550.000917
ORF1ab/nsp5A-B241P241LcCtcTt11AY.60.000041
ORF1ab/nsp5A-B241P241LcCtcTt11AY.960.002075
ORF1ab/nsp5A-B241P241LcCtcTt11AY.98.10.000048
ORF1ab/nsp5A-B241P241LcCtcTt11B0.000128
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.1910.004762
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2140.000055
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2670.010101
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.270.00565
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2800.003086
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.3740.002375
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.3980.003226
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.4090.002833
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.520.012195
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.5250.005464
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.5280.004808
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.80.003584
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1570.002985
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1600.000031
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.100.000878
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.170.000821
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.810.000189
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.870.000728
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.214.20.0006
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.2400.000216
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.2430.00007
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.258.140.00098
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.3110.000275
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.3490.000715
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.36.70.004
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.36.90.003215
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.4670.04
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.4700.001404
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.6230.000536
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.6280.000352
ORF1ab/nsp5A-B241P241LcCtcTt11B.6.10.026316
ORF1ab/nsp5A-B241P241LcCtcTt11C.36.30.000567
ORF1ab/nsp5A-B241P241LcCtcTt11C.36.3.10.002717
ORF1ab/nsp5A-B241P241LcCtcTt11P.1.10.000318
ORF1ab/nsp5A-B241P241LcCtcTt11Q.20.000613