CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P132S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B132P132SP3395SnonsynCccTcc564556310.9975210448-10450
ORF1ab/nsp5A-B132P132SP3395SnonsynCcCTcT5645130.0023029210448-10450
ORF1ab/nsp5A-B132P132SP3395SnonsynCcCTcA564510.00017714810448-10450

Details of the mutation P132S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B132P132SCccTcc56315645All0.001077
ORF1ab/nsp5A-B132P132SCcCTcT135645All0.000002
ORF1ab/nsp5A-B132P132SCcCTcA15645All0
ORF1ab/nsp5A-B132P132SCccTcc670671AY.40.001043
ORF1ab/nsp5A-B132P132SCcCTcT1671AY.40.000002
ORF1ab/nsp5A-B132P132SCccTcc642642B.1.2430.044673
ORF1ab/nsp5A-B132P132SCccTcc623623B.1.1.70.000558
ORF1ab/nsp5A-B132P132SCccTcc592593B.1.1770.007795
ORF1ab/nsp5A-B132P132SCcCTcT1593B.1.1770.000013
ORF1ab/nsp5A-B132P132SCccTcc417419B.1.617.20.00157
ORF1ab/nsp5A-B132P132SCcCTcT1419B.1.617.20.000004
ORF1ab/nsp5A-B132P132SCcCTcA1419B.1.617.20.000004
ORF1ab/nsp5A-B132P132SCccTcc275275AY.430.001218
ORF1ab/nsp5A-B132P132SCccTcc203204B.1.10.003683
ORF1ab/nsp5A-B132P132SCcCTcT1204B.1.10.000018
ORF1ab/nsp5A-B132P132SCccTcc187187B.1.177.810.035403
ORF1ab/nsp5A-B132P132SCccTcc141141AY.290.002224
ORF1ab/nsp5A-B132P132SCccTcc104104B.1.20.000916
ORF1ab/nsp5A-B132P132SCccTcc9898AY.1020.002598
ORF1ab/nsp5A-B132P132SCccTcc9797AS.10.92381
ORF1ab/nsp5A-B132P132SCccTcc9393B.10.000852
ORF1ab/nsp5A-B132P132SCccTcc8989AY.1030.000553
ORF1ab/nsp5A-B132P132SCccTcc8282AY.440.000499
ORF1ab/nsp5A-B132P132SCccTcc7777AY.250.000463
ORF1ab/nsp5A-B132P132SCccTcc6969AY.470.002146
ORF1ab/nsp5A-B132P132SCccTcc6767B.1.466.10.482014
ORF1ab/nsp5A-B132P132SCccTcc6161B.1.1.390.031091
ORF1ab/nsp5A-B132P132SCccTcc6060B.1.6100.212766
ORF1ab/nsp5A-B132P132SCccTcc5555AY.390.001359
ORF1ab/nsp5A-B132P132SCccTcc5353B.1.4290.001247
ORF1ab/nsp5A-B132P132SCccTcc2929AY.1180.001817
ORF1ab/nsp5A-B132P132SCccTcc2829AY.230.001953
ORF1ab/nsp5A-B132P132SCcCTcT129AY.230.00007
ORF1ab/nsp5A-B132P132SCccTcc2929N.100.852941
ORF1ab/nsp5A-B132P132SCccTcc2525B.1.1.3160.023127
ORF1ab/nsp5A-B132P132SCccTcc2424C.30.10.161074
ORF1ab/nsp5A-B132P132SCccTcc2323AY.980.001817
ORF1ab/nsp5A-B132P132SCccTcc2222AY.1000.001012
ORF1ab/nsp5A-B132P132SCccTcc2222AY.1210.002977
ORF1ab/nsp5A-B132P132SCccTcc1919AY.200.000738
ORF1ab/nsp5A-B132P132SCccTcc1919AY.50.000392
ORF1ab/nsp5A-B132P132SCccTcc1919B.1.36.290.009829
ORF1ab/nsp5A-B132P132SCccTcc1818AY.30.000179
ORF1ab/nsp5A-B132P132SCccTcc1818B.1.177.170.014778
ORF1ab/nsp5A-B132P132SCccTcc1818P.10.000284
ORF1ab/nsp5A-B132P132SCccTcc1717B.1.1.3170.006999
ORF1ab/nsp5A-B132P132SCccTcc1616B.1.5960.001394
ORF1ab/nsp5A-B132P132SCccTcc1414AY.1170.001183
ORF1ab/nsp5A-B132P132SCccTcc1414B.1.1.2840.001504
ORF1ab/nsp5A-B132P132SCccTcc1414B.1.360.002043
ORF1ab/nsp5A-B132P132SCccTcc1314B.1.5260.000306
ORF1ab/nsp5A-B132P132SCcCTcT114B.1.5260.000024
ORF1ab/nsp5A-B132P132SCccTcc1414P.1.150.003253
ORF1ab/nsp5A-B132P132SCccTcc1313AY.260.000368
ORF1ab/nsp5A-B132P132SCccTcc1313AY.450.001582
ORF1ab/nsp5A-B132P132SCccTcc1313B.1.177.210.000994
ORF1ab/nsp5A-B132P132SCccTcc99AY.98.10.000436
ORF1ab/nsp5A-B132P132SCccTcc77AY.270.000453
ORF1ab/nsp5A-B132P132SCccTcc77AY.610.000733
ORF1ab/nsp5A-B132P132SCccTcc77B.1.1.2250.05036
ORF1ab/nsp5A-B132P132SCccTcc77B.1.177.320.009447
ORF1ab/nsp5A-B132P132SCccTcc77B.1.177.600.001529
ORF1ab/nsp5A-B132P132SCccTcc77B.1.930.006536
ORF1ab/nsp5A-B132P132SCccTcc66A.210.01662
ORF1ab/nsp5A-B132P132SCccTcc66AG.10.4
ORF1ab/nsp5A-B132P132SCccTcc66AY.1100.000676
ORF1ab/nsp5A-B132P132SCccTcc66AY.1190.000212
ORF1ab/nsp5A-B132P132SCccTcc66AY.9.10.000502
ORF1ab/nsp5A-B132P132SCccTcc66B.1.1.250.003411
ORF1ab/nsp5A-B132P132SCccTcc66B.1.3510.000178
ORF1ab/nsp5A-B132P132SCccTcc66Q.30.00087
ORF1ab/nsp5A-B132P132SCccTcc55AY.420.000201
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.330.002104
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.3680.015432
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1.5190.000199
ORF1ab/nsp5A-B132P132SCccTcc55B.1.1110.005875
ORF1ab/nsp5A-B132P132SCccTcc55B.1.177.630.013514
ORF1ab/nsp5A-B132P132SCccTcc55B.1.258.170.00052
ORF1ab/nsp5A-B132P132SCccTcc55B.1.3110.001373
ORF1ab/nsp5A-B132P132SCcCTcT55B.1.4990.005252
ORF1ab/nsp5A-B132P132SCccTcc55B.1.5750.001517
ORF1ab/nsp5A-B132P132SCccTcc55Q.80.000825
ORF1ab/nsp5A-B132P132SCccTcc44AY.1060.00134
ORF1ab/nsp5A-B132P132SCccTcc44AY.1110.000733
ORF1ab/nsp5A-B132P132SCccTcc44AY.1200.000149
ORF1ab/nsp5A-B132P132SCccTcc44AY.3.10.000341
ORF1ab/nsp5A-B132P132SCccTcc44AY.330.000267
ORF1ab/nsp5A-B132P132SCccTcc44AY.350.000932
ORF1ab/nsp5A-B132P132SCccTcc44AY.5.40.001107
ORF1ab/nsp5A-B132P132SCccTcc44AY.540.000381
ORF1ab/nsp5A-B132P132SCccTcc44B.1.1.2140.000222
ORF1ab/nsp5A-B132P132SCccTcc44B.1.2340.000528
ORF1ab/nsp5A-B132P132SCccTcc44B.1.3960.002823
ORF1ab/nsp5A-B132P132SCccTcc44B.1.4270.000202
ORF1ab/nsp5A-B132P132SCccTcc44B.1.617.10.000516
ORF1ab/nsp5A-B132P132SCccTcc33A.23.10.002113
ORF1ab/nsp5A-B132P132SCccTcc33AY.1130.000427
ORF1ab/nsp5A-B132P132SCccTcc33AY.190.003421
ORF1ab/nsp5A-B132P132SCccTcc33AY.340.000291
ORF1ab/nsp5A-B132P132SCccTcc33AY.460.000312
ORF1ab/nsp5A-B132P132SCccTcc33AY.70.000588
ORF1ab/nsp5A-B132P132SCccTcc33AY.700.000626
ORF1ab/nsp5A-B132P132SCccTcc33AY.99.20.000276
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1.2400.014085
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1.280.000934
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1280.001906
ORF1ab/nsp5A-B132P132SCccTcc33B.1.1600.000094
ORF1ab/nsp5A-B132P132SCccTcc33B.1.177.70.000495
ORF1ab/nsp5A-B132P132SCccTcc33B.1.2210.000213
ORF1ab/nsp5A-B132P132SCccTcc33B.1.351.20.000908
ORF1ab/nsp5A-B132P132SCccTcc33B.1.3560.005181
ORF1ab/nsp5A-B132P132SCccTcc33B.1.3780.020548
ORF1ab/nsp5A-B132P132SCccTcc33B.1.438.10.000322
ORF1ab/nsp5A-B132P132SCccTcc33B.1.466.20.001174
ORF1ab/nsp5A-B132P132SCccTcc33B.1.5510.003871
ORF1ab/nsp5A-B132P132SCccTcc33B.1.5600.013889
ORF1ab/nsp5A-B132P132SCccTcc33B.1.6200.002838
ORF1ab/nsp5A-B132P132SCccTcc33B.1.6210.000266
ORF1ab/nsp5A-B132P132SCccTcc33P.20.00056
ORF1ab/nsp5A-B132P132SCccTcc33P.60.009434
ORF1ab/nsp5A-B132P132SCccTcc22AY.1160.000574
ORF1ab/nsp5A-B132P132SCccTcc22AY.140.000176
ORF1ab/nsp5A-B132P132SCccTcc22AY.16.10.00094
ORF1ab/nsp5A-B132P132SCccTcc22AY.34.10.00102
ORF1ab/nsp5A-B132P132SCccTcc22AY.4.50.000215
ORF1ab/nsp5A-B132P132SCccTcc22AY.740.000231
ORF1ab/nsp5A-B132P132SCccTcc22AY.75.10.000361
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.2220.000408
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.2980.001724
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.3060.000877
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.3740.004751
ORF1ab/nsp5A-B132P132SCccTcc22B.1.1.740.008621
ORF1ab/nsp5A-B132P132SCccTcc22B.1.2400.000431
ORF1ab/nsp5A-B132P132SCccTcc22B.1.2790.001027
ORF1ab/nsp5A-B132P132SCccTcc22B.1.4600.035714
ORF1ab/nsp5A-B132P132SCccTcc22B.1.6040.034483
ORF1ab/nsp5A-B132P132SCccTcc22B.1.6370.000146
ORF1ab/nsp5A-B132P132SCccTcc22B.120.012821
ORF1ab/nsp5A-B132P132SCccTcc22C.320.046512
ORF1ab/nsp5A-B132P132SCccTcc22C.370.000232
ORF1ab/nsp5A-B132P132SCccTcc22D.20.00015
ORF1ab/nsp5A-B132P132SCccTcc22N.40.008511
ORF1ab/nsp5A-B132P132SCcCTcT12N.50.001767
ORF1ab/nsp5A-B132P132SCccTcc12N.50.001767
ORF1ab/nsp5A-B132P132SCccTcc22P.1.120.000968
ORF1ab/nsp5A-B132P132SCccTcc22P.1.20.002312
ORF1ab/nsp5A-B132P132SCccTcc11A0.000387
ORF1ab/nsp5A-B132P132SCccTcc11A.10.000282
ORF1ab/nsp5A-B132P132SCccTcc11AE.80.000489
ORF1ab/nsp5A-B132P132SCccTcc11AY.1010.00049
ORF1ab/nsp5A-B132P132SCccTcc11AY.1070.000466
ORF1ab/nsp5A-B132P132SCccTcc11AY.1090.00074
ORF1ab/nsp5A-B132P132SCccTcc11AY.1140.000231
ORF1ab/nsp5A-B132P132SCccTcc11AY.120.000316
ORF1ab/nsp5A-B132P132SCccTcc11AY.120.2.10.000498
ORF1ab/nsp5A-B132P132SCccTcc11AY.29.10.000221
ORF1ab/nsp5A-B132P132SCccTcc11AY.360.000148
ORF1ab/nsp5A-B132P132SCccTcc11AY.370.000316
ORF1ab/nsp5A-B132P132SCccTcc11AY.380.000499
ORF1ab/nsp5A-B132P132SCccTcc11AY.39.10.00004
ORF1ab/nsp5A-B132P132SCccTcc11AY.39.1.10.000725
ORF1ab/nsp5A-B132P132SCccTcc11AY.4.20.000022
ORF1ab/nsp5A-B132P132SCccTcc11AY.4.2.10.000149
ORF1ab/nsp5A-B132P132SCccTcc11AY.410.000294
ORF1ab/nsp5A-B132P132SCccTcc11AY.46.40.000165
ORF1ab/nsp5A-B132P132SCccTcc11AY.46.60.000072
ORF1ab/nsp5A-B132P132SCccTcc11AY.480.000465
ORF1ab/nsp5A-B132P132SCccTcc11AY.5.30.000337
ORF1ab/nsp5A-B132P132SCccTcc11AY.530.000288
ORF1ab/nsp5A-B132P132SCccTcc11AY.550.000917
ORF1ab/nsp5A-B132P132SCccTcc11AY.60.000041
ORF1ab/nsp5A-B132P132SCccTcc11AY.640.000595
ORF1ab/nsp5A-B132P132SCccTcc11AY.660.00107
ORF1ab/nsp5A-B132P132SCccTcc11AY.680.000274
ORF1ab/nsp5A-B132P132SCccTcc11AY.7.10.000113
ORF1ab/nsp5A-B132P132SCccTcc11AY.760.004831
ORF1ab/nsp5A-B132P132SCccTcc11AY.780.001541
ORF1ab/nsp5A-B132P132SCccTcc11AY.850.000427
ORF1ab/nsp5A-B132P132SCccTcc11AY.9.20.000037
ORF1ab/nsp5A-B132P132SCccTcc11AY.920.000287
ORF1ab/nsp5A-B132P132SCccTcc11AY.950.000761
ORF1ab/nsp5A-B132P132SCccTcc11AZ.50.003509
ORF1ab/nsp5A-B132P132SCccTcc11B0.000128
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1410.002012
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1710.003676
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.1760.000439
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2160.00089
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2630.001558
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2910.000742
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.2970.002237
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3110.000358
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3540.004386
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.3770.001381
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4090.002833
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4160.000905
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4330.001425
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.4860.001577
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.5260.003546
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1.630.000386
ORF1ab/nsp5A-B132P132SCccTcc11B.1.130.002375
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1420.002899
ORF1ab/nsp5A-B132P132SCccTcc11B.1.160.240.004425
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1670.007812
ORF1ab/nsp5A-B132P132SCccTcc11B.1.177.180.00116
ORF1ab/nsp5A-B132P132SCccTcc11B.1.177.790.002342
ORF1ab/nsp5A-B132P132SCccTcc11B.1.1800.05
ORF1ab/nsp5A-B132P132SCccTcc11B.1.2100.002132
ORF1ab/nsp5A-B132P132SCccTcc11B.1.220.001318
ORF1ab/nsp5A-B132P132SCccTcc11B.1.2230.002778
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3010.005917
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3440.008197
ORF1ab/nsp5A-B132P132SCccTcc11B.1.351.30.000876
ORF1ab/nsp5A-B132P132SCccTcc11B.1.351.50.0006
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3570.009524
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.180.00042
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.70.004
ORF1ab/nsp5A-B132P132SCccTcc11B.1.36.80.001
ORF1ab/nsp5A-B132P132SCccTcc11B.1.3690.000285
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4000.000429
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4050.012346
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4130.004255
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4160.001269
ORF1ab/nsp5A-B132P132SCccTcc11B.1.4660.023256
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5160.001957
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5270.003704
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5610.000397
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5640.000426
ORF1ab/nsp5A-B132P132SCcCTcT11B.1.5680.001111
ORF1ab/nsp5A-B132P132SCccTcc11B.1.575.10.002439
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5760.000907
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5870.001898
ORF1ab/nsp5A-B132P132SCccTcc11B.1.595.10.005848
ORF1ab/nsp5A-B132P132SCccTcc11B.1.5970.00463
ORF1ab/nsp5A-B132P132SCccTcc11B.1.80.001972
ORF1ab/nsp5A-B132P132SCccTcc11B.30.000831
ORF1ab/nsp5A-B132P132SCccTcc11B.310.003731
ORF1ab/nsp5A-B132P132SCccTcc11B.550.00295
ORF1ab/nsp5A-B132P132SCccTcc11C.36.30.000567
ORF1ab/nsp5A-B132P132SCccTcc11P.1.140.000048
ORF1ab/nsp5A-B132P132SCccTcc11P.1.170.000162
ORF1ab/nsp5A-B132P132SCccTcc11P.1.60.001946
ORF1ab/nsp5A-B132P132SCccTcc11P.30.001595
ORF1ab/nsp5A-B132P132SCccTcc11Q.20.000613
ORF1ab/nsp5A-B132P132SCccTcc11R.10.00009