CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P108S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B108P108SP3371SnonsynCcaTca20257202430.99930910376-10378
ORF1ab/nsp5A-B108P108SP3371SnonsynCcATcG20257140.00069111910376-10378

Details of the mutation P108S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B108P108SCcaTca2024320257All0.003872
ORF1ab/nsp5A-B108P108SCcATcG1420257All0.000003
ORF1ab/nsp5A-B108P108SCcaTca93109311B.1.1.2840.999893
ORF1ab/nsp5A-B108P108SCcATcG19311B.1.1.2840.000107
ORF1ab/nsp5A-B108P108SCcaTca35533553B.1.1.70.003181
ORF1ab/nsp5A-B108P108SCcaTca831831AY.770.936866
ORF1ab/nsp5A-B108P108SCcaTca690690AY.40.001074
ORF1ab/nsp5A-B108P108SCcaTca616616AY.260.017439
ORF1ab/nsp5A-B108P108SCcaTca367367B.1.5260.008626
ORF1ab/nsp5A-B108P108SCcaTca287287AY.540.027365
ORF1ab/nsp5A-B108P108SCcaTca283283B.1.20.002492
ORF1ab/nsp5A-B108P108SCcaTca262262B.1.617.20.000987
ORF1ab/nsp5A-B108P108SCcaTca235235AY.700.048999
ORF1ab/nsp5A-B108P108SCcaTca228228B.1.10.004136
ORF1ab/nsp5A-B108P108SCcaTca212212B.1.1.1350.995305
ORF1ab/nsp5A-B108P108SCcaTca168168B.1.177.810.031806
ORF1ab/nsp5A-B108P108SCcaTca155155AY.1030.000962
ORF1ab/nsp5A-B108P108SCcaTca146146P.1.10.046379
ORF1ab/nsp5A-B108P108SCcaTca141141B.1.1770.001857
ORF1ab/nsp5A-B108P108SCcaTca128128B.1.1600.003992
ORF1ab/nsp5A-B108P108SCcaTca119119B.1.440.991667
ORF1ab/nsp5A-B108P108SCcaTca117117AY.250.000704
ORF1ab/nsp5A-B108P108SCcaTca111111AY.440.000676
ORF1ab/nsp5A-B108P108SCcaTca104104B.10.000953
ORF1ab/nsp5A-B108P108SCcaTca100100P.10.001575
ORF1ab/nsp5A-B108P108SCcaTca9393B.1.3510.002765
ORF1ab/nsp5A-B108P108SCcaTca7979B.1.1.5190.003137
ORF1ab/nsp5A-B108P108SCcaTca6779B.1.2580.004459
ORF1ab/nsp5A-B108P108SCcATcG1279B.1.2580.000799
ORF1ab/nsp5A-B108P108SCcaTca7979B.1.4290.001859
ORF1ab/nsp5A-B108P108SCcaTca7272B.1.2400.015521
ORF1ab/nsp5A-B108P108SCcaTca6666B.1.6370.004823
ORF1ab/nsp5A-B108P108SCcaTca6363AY.30.000627
ORF1ab/nsp5A-B108P108SCcaTca6262AY.50.00128
ORF1ab/nsp5A-B108P108SCcaTca5858AY.430.000257
ORF1ab/nsp5A-B108P108SCcaTca5555B.1.2210.003907
ORF1ab/nsp5A-B108P108SCcaTca5151B.1.1.3200.927273
ORF1ab/nsp5A-B108P108SCcaTca4949B.1.258.150.924528
ORF1ab/nsp5A-B108P108SCcaTca4343B.1.564.10.067823
ORF1ab/nsp5A-B108P108SCcaTca4242B.1.1.1601
ORF1ab/nsp5A-B108P108SCcaTca4141B.1.1.370.007907
ORF1ab/nsp5A-B108P108SCcaTca3939AY.4.20.000846
ORF1ab/nsp5A-B108P108SCcaTca3636AY.290.000568
ORF1ab/nsp5A-B108P108SCcaTca3535AY.200.00136
ORF1ab/nsp5A-B108P108SCcaTca3333AY.29.10.007277
ORF1ab/nsp5A-B108P108SCcaTca3030N.100.882353
ORF1ab/nsp5A-B108P108SCcaTca2828AY.390.000692
ORF1ab/nsp5A-B108P108SCcaTca2727Q.40.012278
ORF1ab/nsp5A-B108P108SCcaTca2626B.1.3181
ORF1ab/nsp5A-B108P108SCcaTca2424B.1.1.2410.049689
ORF1ab/nsp5A-B108P108SCcaTca2323B.1.258.170.002391
ORF1ab/nsp5A-B108P108SCcaTca2222AY.470.000684
ORF1ab/nsp5A-B108P108SCcaTca2121B.1.258.110.008323
ORF1ab/nsp5A-B108P108SCcaTca2020AY.9.10.001674
ORF1ab/nsp5A-B108P108SCcaTca1919AY.90.001284
ORF1ab/nsp5A-B108P108SCcaTca1717AY.1060.005693
ORF1ab/nsp5A-B108P108SCcaTca1717AY.620.007407
ORF1ab/nsp5A-B108P108SCcaTca1717B.1.360.00248
ORF1ab/nsp5A-B108P108SCcaTca1717C.370.001973
ORF1ab/nsp5A-B108P108SCcaTca1616AY.1190.000565
ORF1ab/nsp5A-B108P108SCcaTca1616AY.420.000644
ORF1ab/nsp5A-B108P108SCcaTca1616AY.99.20.001475
ORF1ab/nsp5A-B108P108SCcaTca1616B.1.3200.019925
ORF1ab/nsp5A-B108P108SCcaTca1515B.1.1.3180.004526
ORF1ab/nsp5A-B108P108SCcaTca1414AY.330.000935
ORF1ab/nsp5A-B108P108SCcaTca1414AY.980.001106
ORF1ab/nsp5A-B108P108SCcaTca1414B.1.1.330.005892
ORF1ab/nsp5A-B108P108SCcaTca1414B.1.1.3920.736842
ORF1ab/nsp5A-B108P108SCcaTca1414B.1.2430.000974
ORF1ab/nsp5A-B108P108SCcaTca1313AY.39.10.000515
ORF1ab/nsp5A-B108P108SCcaTca1313AY.750.000728
ORF1ab/nsp5A-B108P108SCcaTca1313B.1.177.210.000994
ORF1ab/nsp5A-B108P108SCcaTca1212AY.1170.001014
ORF1ab/nsp5A-B108P108SCcaTca1212AY.360.001779
ORF1ab/nsp5A-B108P108SCcaTca1111C.350.008514
ORF1ab/nsp5A-B108P108SCcaTca1010AY.60.000411
ORF1ab/nsp5A-B108P108SCcaTca1010B.1.1.500.006789
ORF1ab/nsp5A-B108P108SCcaTca1010B.1.5950.00261
ORF1ab/nsp5A-B108P108SCcaTca1010B.1.6210.000885
ORF1ab/nsp5A-B108P108SCcaTca99AY.1180.000564
ORF1ab/nsp5A-B108P108SCcaTca99AY.1200.000335
ORF1ab/nsp5A-B108P108SCcaTca99B.1.177.730.005096
ORF1ab/nsp5A-B108P108SCcaTca88B.1.2340.001056
ORF1ab/nsp5A-B108P108SCcaTca88P.1.150.001859
ORF1ab/nsp5A-B108P108SCcaTca77Q.80.001154
ORF1ab/nsp5A-B108P108SCcaTca66AY.450.00073
ORF1ab/nsp5A-B108P108SCcaTca66B.1.1.10.00196
ORF1ab/nsp5A-B108P108SCcaTca66B.1.1.100.006689
ORF1ab/nsp5A-B108P108SCcaTca66B.1.3110.001647
ORF1ab/nsp5A-B108P108SCcaTca66B.1.5640.002555
ORF1ab/nsp5A-B108P108SCcaTca66B.1.6090.002876
ORF1ab/nsp5A-B108P108SCcaTca66P.20.00112
ORF1ab/nsp5A-B108P108SCcaTca55AP.10.007508
ORF1ab/nsp5A-B108P108SCcaTca55AY.1000.00023
ORF1ab/nsp5A-B108P108SCcaTca55AY.1130.000712
ORF1ab/nsp5A-B108P108SCcaTca55AY.460.00052
ORF1ab/nsp5A-B108P108SCcaTca55AY.7.10.000564
ORF1ab/nsp5A-B108P108SCcaTca55AY.75.10.000902
ORF1ab/nsp5A-B108P108SCcaTca55AY.98.10.000242
ORF1ab/nsp5A-B108P108SCcaTca55B.1.1.2140.000277
ORF1ab/nsp5A-B108P108SCcaTca55B.1.177.40.001055
ORF1ab/nsp5A-B108P108SCcaTca55B.1.5250.000566
ORF1ab/nsp5A-B108P108SCcaTca55B.1.5960.000436
ORF1ab/nsp5A-B108P108SCcaTca55D.20.000375
ORF1ab/nsp5A-B108P108SCcaTca44AY.46.50.000794
ORF1ab/nsp5A-B108P108SCcaTca44AY.590.002119
ORF1ab/nsp5A-B108P108SCcaTca44AY.99.10.006211
ORF1ab/nsp5A-B108P108SCcaTca44B.1.1.2220.000816
ORF1ab/nsp5A-B108P108SCcaTca44B.1.1.390.002039
ORF1ab/nsp5A-B108P108SCcaTca44B.1.1.4340.001394
ORF1ab/nsp5A-B108P108SCcaTca44B.1.4270.000202
ORF1ab/nsp5A-B108P108SCcaTca44B.1.5170.001708
ORF1ab/nsp5A-B108P108SCcaTca44P.1.70.001277
ORF1ab/nsp5A-B108P108SCcaTca44Q.10.000505
ORF1ab/nsp5A-B108P108SCcaTca33A.2.50.001497
ORF1ab/nsp5A-B108P108SCcaTca33AY.116.10.000934
ORF1ab/nsp5A-B108P108SCcaTca33AY.270.000194
ORF1ab/nsp5A-B108P108SCcaTca33AY.320.001597
ORF1ab/nsp5A-B108P108SCcaTca33AY.7.20.001678
ORF1ab/nsp5A-B108P108SCcaTca33AY.820.004071
ORF1ab/nsp5A-B108P108SCcaTca33AY.930.000819
ORF1ab/nsp5A-B108P108SCcaTca33B.1.1.1700.003741
ORF1ab/nsp5A-B108P108SCcaTca33B.1.1.2530.007519
ORF1ab/nsp5A-B108P108SCcaTca33B.1.1.2650.009464
ORF1ab/nsp5A-B108P108SCcaTca33B.1.1.3260.005282
ORF1ab/nsp5A-B108P108SCcaTca33B.1.1240.023438
ORF1ab/nsp5A-B108P108SCcaTca33B.1.243.10.066667
ORF1ab/nsp5A-B108P108SCcaTca33B.1.36.290.001552
ORF1ab/nsp5A-B108P108SCcaTca33B.1.3750.002459
ORF1ab/nsp5A-B108P108SCcaTca33B.1.3890.003006
ORF1ab/nsp5A-B108P108SCcaTca33B.1.438.10.000322
ORF1ab/nsp5A-B108P108SCcaTca33B.1.4590.012245
ORF1ab/nsp5A-B108P108SCcaTca33B.1.5510.003871
ORF1ab/nsp5A-B108P108SCcaTca33C.160.003181
ORF1ab/nsp5A-B108P108SCcaTca33P.1.140.000143
ORF1ab/nsp5A-B108P108SCcaTca33P.1.20.003468
ORF1ab/nsp5A-B108P108SCcaTca33P.70.0131
ORF1ab/nsp5A-B108P108SCcATcG120.055556
ORF1ab/nsp5A-B108P108SCcaTca120.055556
ORF1ab/nsp5A-B108P108SCcaTca22AY.1020.000053
ORF1ab/nsp5A-B108P108SCcaTca22AY.1100.000225
ORF1ab/nsp5A-B108P108SCcaTca22AY.1140.000462
ORF1ab/nsp5A-B108P108SCcaTca22AY.130.000322
ORF1ab/nsp5A-B108P108SCcaTca22AY.140.000176
ORF1ab/nsp5A-B108P108SCcaTca22AY.230.000139
ORF1ab/nsp5A-B108P108SCcaTca22AY.4.2.10.000298
ORF1ab/nsp5A-B108P108SCcaTca22AY.4.40.000818
ORF1ab/nsp5A-B108P108SCcaTca22AY.4.50.000215
ORF1ab/nsp5A-B108P108SCcaTca22AY.46.40.000329
ORF1ab/nsp5A-B108P108SCcaTca22AY.46.60.000144
ORF1ab/nsp5A-B108P108SCcaTca22AY.550.001835
ORF1ab/nsp5A-B108P108SCcaTca22AY.70.000392
ORF1ab/nsp5A-B108P108SCcaTca22AY.730.001331
ORF1ab/nsp5A-B108P108SCcaTca22AY.740.000231
ORF1ab/nsp5A-B108P108SCcaTca22AY.9.20.000073
ORF1ab/nsp5A-B108P108SCcaTca22AZ.20.001642
ORF1ab/nsp5A-B108P108SCcaTca22B0.000256
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1.2160.001781
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1.280.000622
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1.4160.00181
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1.4480.004065
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1.560.035714
ORF1ab/nsp5A-B108P108SCcaTca22B.1.110.30.001437
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1110.00235
ORF1ab/nsp5A-B108P108SCcaTca22B.1.1260.002551
ORF1ab/nsp5A-B108P108SCcaTca22B.1.177.160.001329
ORF1ab/nsp5A-B108P108SCcaTca22B.1.177.70.00033
ORF1ab/nsp5A-B108P108SCcaTca22B.1.177.840.013333
ORF1ab/nsp5A-B108P108SCcaTca22B.1.2230.005556
ORF1ab/nsp5A-B108P108SCcaTca22B.1.2410.001623
ORF1ab/nsp5A-B108P108SCcaTca22B.1.2980.004228
ORF1ab/nsp5A-B108P108SCcaTca22B.1.36.180.00084
ORF1ab/nsp5A-B108P108SCcaTca22B.1.3610.002577
ORF1ab/nsp5A-B108P108SCcaTca22B.1.3900.021277
ORF1ab/nsp5A-B108P108SCcaTca22B.1.3960.001411
ORF1ab/nsp5A-B108P108SCcaTca22B.1.5680.002222
ORF1ab/nsp5A-B108P108SCcaTca22B.1.5750.000607
ORF1ab/nsp5A-B108P108SCcaTca22B.1.617.10.000258
ORF1ab/nsp5A-B108P108SCcaTca22C.130.051282
ORF1ab/nsp5A-B108P108SCcaTca22C.36.30.001134
ORF1ab/nsp5A-B108P108SCcaTca22Q.30.00029
ORF1ab/nsp5A-B108P108SCcaTca11A.20.000662
ORF1ab/nsp5A-B108P108SCcaTca11A.2.5.10.004808
ORF1ab/nsp5A-B108P108SCcaTca11A.2.5.30.010309
ORF1ab/nsp5A-B108P108SCcaTca11A.23.10.000704
ORF1ab/nsp5A-B108P108SCcaTca11A.270.001656
ORF1ab/nsp5A-B108P108SCcaTca11AD.20.000219
ORF1ab/nsp5A-B108P108SCcaTca11AU.30.00211
ORF1ab/nsp5A-B108P108SCcaTca11AY.1050.000643
ORF1ab/nsp5A-B108P108SCcaTca11AY.1070.000466
ORF1ab/nsp5A-B108P108SCcaTca11AY.1090.00074
ORF1ab/nsp5A-B108P108SCcaTca11AY.1110.000183
ORF1ab/nsp5A-B108P108SCcaTca11AY.160.00038
ORF1ab/nsp5A-B108P108SCcaTca11AY.240.000431
ORF1ab/nsp5A-B108P108SCcaTca11AY.340.000097
ORF1ab/nsp5A-B108P108SCcaTca11AY.400.000964
ORF1ab/nsp5A-B108P108SCcaTca11AY.410.000294
ORF1ab/nsp5A-B108P108SCcaTca11AY.46.20.000635
ORF1ab/nsp5A-B108P108SCcaTca11AY.480.000465
ORF1ab/nsp5A-B108P108SCcaTca11AY.5.40.000277
ORF1ab/nsp5A-B108P108SCcaTca11AY.510.000909
ORF1ab/nsp5A-B108P108SCcaTca11AY.600.000938
ORF1ab/nsp5A-B108P108SCcaTca11AY.640.000595
ORF1ab/nsp5A-B108P108SCcaTca11AY.680.000274
ORF1ab/nsp5A-B108P108SCcaTca11AY.710.000475
ORF1ab/nsp5A-B108P108SCcaTca11AY.780.001541
ORF1ab/nsp5A-B108P108SCcaTca11AY.80.000606
ORF1ab/nsp5A-B108P108SCcaTca11AY.850.000427
ORF1ab/nsp5A-B108P108SCcaTca11AY.920.000287
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.140.017241
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2320.001815
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2360.006897
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2430.004082
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2440.015385
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2670.010101
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2890.002083
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.2910.000742
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3020.002075
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3060.000438
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3090.005848
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3110.000358
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3750.011905
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.3980.003226
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.4250.045455
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.4320.001266
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.450.014085
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.50.008333
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1.5060.037037
ORF1ab/nsp5A-B108P108SCcaTca11B.1.110.10.1
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1280.000635
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1470.000756
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.100.000878
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.120.000152
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.170.000821
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.230.003236
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.320.00135
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.430.001477
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.440.000519
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.500.004695
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.560.000668
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.570.000281
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.600.000218
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.620.001192
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.650.000665
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.750.001041
ORF1ab/nsp5A-B108P108SCcaTca11B.1.177.830.001481
ORF1ab/nsp5A-B108P108SCcaTca11B.1.1990.004132
ORF1ab/nsp5A-B108P108SCcaTca11B.1.2100.002132
ORF1ab/nsp5A-B108P108SCcaTca11B.1.214.10.02
ORF1ab/nsp5A-B108P108SCcaTca11B.1.214.20.0006
ORF1ab/nsp5A-B108P108SCcaTca11B.1.221.20.004016
ORF1ab/nsp5A-B108P108SCcaTca11B.1.2320.000537
ORF1ab/nsp5A-B108P108SCcaTca11B.1.2350.002519
ORF1ab/nsp5A-B108P108SCcaTca11B.1.351.20.000303
ORF1ab/nsp5A-B108P108SCcaTca11B.1.3550.011111
ORF1ab/nsp5A-B108P108SCcaTca11B.1.36.160.001425
ORF1ab/nsp5A-B108P108SCcaTca11B.1.36.360.000602
ORF1ab/nsp5A-B108P108SCcaTca11B.1.3830.009009
ORF1ab/nsp5A-B108P108SCcaTca11B.1.4160.001269
ORF1ab/nsp5A-B108P108SCcaTca11B.1.4280.00102
ORF1ab/nsp5A-B108P108SCcaTca11B.1.4560.003268
ORF1ab/nsp5A-B108P108SCcaTca11B.1.466.20.000391
ORF1ab/nsp5A-B108P108SCcaTca11B.1.4800.002488
ORF1ab/nsp5A-B108P108SCcaTca11B.1.4990.00105
ORF1ab/nsp5A-B108P108SCcaTca11B.1.5240.001406
ORF1ab/nsp5A-B108P108SCcaTca11B.1.5330.009615
ORF1ab/nsp5A-B108P108SCcaTca11B.1.5880.00091
ORF1ab/nsp5A-B108P108SCcaTca11B.1.6180.004032
ORF1ab/nsp5A-B108P108SCcaTca11B.1.621.10.000506
ORF1ab/nsp5A-B108P108SCcaTca11B.530.011765
ORF1ab/nsp5A-B108P108SCcaTca11B.570.015152
ORF1ab/nsp5A-B108P108SCcaTca11C.140.004329
ORF1ab/nsp5A-B108P108SCcaTca11C.260.007353
ORF1ab/nsp5A-B108P108SCcaTca11C.360.000911
ORF1ab/nsp5A-B108P108SCcaTca11C.36.20.034483
ORF1ab/nsp5A-B108P108SCcaTca11P.1.100.000269
ORF1ab/nsp5A-B108P108SCcaTca11P.1.120.000484
ORF1ab/nsp5A-B108P108SCcaTca11P.1.170.000162
ORF1ab/nsp5A-B108P108SCcaTca11P.1.90.004808
ORF1ab/nsp5A-B108P108SCcaTca11Q.70.001111
ORF1ab/nsp5A-B108P108SCcaTca11W.10.008696