CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = P108P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B108P108PP3371PsynccAccG1641090.66463410376-10378
ORF1ab/nsp5A-B108P108PP3371PsynccAccT164400.24390210376-10378
ORF1ab/nsp5A-B108P108PP3371PsynccAccC164150.091463410376-10378

Details of the mutation P108P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B108P108PccAccG109164All0.000021
ORF1ab/nsp5A-B108P108PccAccT40164All0.000008
ORF1ab/nsp5A-B108P108PccAccC15164All0.000003
ORF1ab/nsp5A-B108P108PccAccG2331B.1.1.70.000021
ORF1ab/nsp5A-B108P108PccAccC431B.1.1.70.000004
ORF1ab/nsp5A-B108P108PccAccT431B.1.1.70.000004
ORF1ab/nsp5A-B108P108PccAccT2128B.1.617.20.000079
ORF1ab/nsp5A-B108P108PccAccG728B.1.617.20.000026
ORF1ab/nsp5A-B108P108PccAccG1820AY.40.000028
ORF1ab/nsp5A-B108P108PccAccC120AY.40.000002
ORF1ab/nsp5A-B108P108PccAccT120AY.40.000002
ORF1ab/nsp5A-B108P108PccAccG710AY.1030.000043
ORF1ab/nsp5A-B108P108PccAccC310AY.1030.000019
ORF1ab/nsp5A-B108P108PccAccG77B.1.1.4340.00244
ORF1ab/nsp5A-B108P108PccAccG46AY.430.000018
ORF1ab/nsp5A-B108P108PccAccT26AY.430.000009
ORF1ab/nsp5A-B108P108PccAccG55AY.290.000079
ORF1ab/nsp5A-B108P108PccAccT44AY.400.003857
ORF1ab/nsp5A-B108P108PccAccG24P.10.000032
ORF1ab/nsp5A-B108P108PccAccT24P.10.000032
ORF1ab/nsp5A-B108P108PccAccC230.111111
ORF1ab/nsp5A-B108P108PccAccG130.055556
ORF1ab/nsp5A-B108P108PccAccG33AY.30.00003
ORF1ab/nsp5A-B108P108PccAccG33B.1.10.000054
ORF1ab/nsp5A-B108P108PccAccT23B.1.1770.000026
ORF1ab/nsp5A-B108P108PccAccG13B.1.1770.000013
ORF1ab/nsp5A-B108P108PccAccG22AY.250.000012
ORF1ab/nsp5A-B108P108PccAccG22AY.46.40.000329
ORF1ab/nsp5A-B108P108PccAccG22AY.470.000062
ORF1ab/nsp5A-B108P108PccAccG22B.1.20.000018
ORF1ab/nsp5A-B108P108PccAccG22B.1.2210.000142
ORF1ab/nsp5A-B108P108PccAccT22B.1.3510.000059
ORF1ab/nsp5A-B108P108PccAccG22B.1.4290.000047
ORF1ab/nsp5A-B108P108PccAccG22R.10.00018
ORF1ab/nsp5A-B108P108PccAccG11AY.1180.000063
ORF1ab/nsp5A-B108P108PccAccG11AY.1190.000035
ORF1ab/nsp5A-B108P108PccAccC11AY.1200.000037
ORF1ab/nsp5A-B108P108PccAccG11AY.420.00004
ORF1ab/nsp5A-B108P108PccAccG11AY.440.000006
ORF1ab/nsp5A-B108P108PccAccG11AY.50.000021
ORF1ab/nsp5A-B108P108PccAccG11AY.5.30.000337
ORF1ab/nsp5A-B108P108PccAccC11B.1.1.1010.01
ORF1ab/nsp5A-B108P108PccAccG11B.1.1.2140.000055
ORF1ab/nsp5A-B108P108PccAccG11B.1.1.5190.00004
ORF1ab/nsp5A-B108P108PccAccT11B.1.1470.000756
ORF1ab/nsp5A-B108P108PccAccC11B.1.1600.000031
ORF1ab/nsp5A-B108P108PccAccC11B.1.177.750.001041
ORF1ab/nsp5A-B108P108PccAccG11B.1.2580.000067
ORF1ab/nsp5A-B108P108PccAccC11B.1.2600.003344
ORF1ab/nsp5A-B108P108PccAccT11B.1.3260.007576
ORF1ab/nsp5A-B108P108PccAccG11B.1.4040.001302
ORF1ab/nsp5A-B108P108PccAccG11B.1.4970.000315
ORF1ab/nsp5A-B108P108PccAccG11B.1.6280.000352
ORF1ab/nsp5A-B108P108PccAccG11C.370.000116
ORF1ab/nsp5A-B108P108PccAccG11Z.10.00289