CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = N65del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B65N65del1N3328del1delaaTaa-630.510247-10249
ORF1ab/nsp5A-B65N65del1N3328del1delAat-at620.33333310247-10249
ORF1ab/nsp5A-B65N65del1N3328del1delAaT-aC610.16666710247-10249

Details of the mutation N65del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B65N65del1aaTaa-36All0.000001
ORF1ab/nsp5A-B65N65del1Aat-at26All0
ORF1ab/nsp5A-B65N65del1AaT-aC16All0
ORF1ab/nsp5A-B65N65del1Aat-at11AY.1190.000035
ORF1ab/nsp5A-B65N65del1aaTaa-11AY.40.000002
ORF1ab/nsp5A-B65N65del1AaT-aC11AY.440.000006
ORF1ab/nsp5A-B65N65del1aaTaa-11B.10.000009
ORF1ab/nsp5A-B65N65del1aaTaa-11B.1.10.000018
ORF1ab/nsp5A-B65N65del1Aat-at11B.1.20.000009