CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = M49T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B49M49TM3312TnonsynaTgaCg6969110199-10201

Details of the mutation M49T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B49M49TaTgaCg6969All0.000013
ORF1ab/nsp5A-B49M49TaTgaCg5656B.1.36.200.949153
ORF1ab/nsp5A-B49M49TaTgaCg44AY.40.000006
ORF1ab/nsp5A-B49M49TaTgaCg33B.10.000027
ORF1ab/nsp5A-B49M49TaTgaCg11AE.80.000489
ORF1ab/nsp5A-B49M49TaTgaCg11AY.1030.000006
ORF1ab/nsp5A-B49M49TaTgaCg11AY.440.000006
ORF1ab/nsp5A-B49M49TaTgaCg11B.1.20.000009
ORF1ab/nsp5A-B49M49TaTgaCg11B.1.2430.00007
ORF1ab/nsp5A-B49M49TaTgaCg11D.20.000075