CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = L89P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B89L89PL3352PnonsyncTtcCt870.87510319-10321
ORF1ab/nsp5A-B89L89PL3352PnonsyncTTcCC810.12510319-10321

Details of the mutation L89P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B89L89PcTtcCt78All0.000001
ORF1ab/nsp5A-B89L89PcTTcCC18All0
ORF1ab/nsp5A-B89L89PcTtcCt120.055556
ORF1ab/nsp5A-B89L89PcTTcCC120.055556
ORF1ab/nsp5A-B89L89PcTtcCt22D.20.00015
ORF1ab/nsp5A-B89L89PcTtcCt11AY.460.000104
ORF1ab/nsp5A-B89L89PcTtcCt11B0.000128
ORF1ab/nsp5A-B89L89PcTtcCt11B.1.1.70.000001
ORF1ab/nsp5A-B89L89PcTtcCt11B.1.20.000009