CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = L89I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B89L89IL3352InonsynCttAtt12110.91666710319-10321
ORF1ab/nsp5A-B89L89IL3352InonsynCtTAtA1210.083333310319-10321

Details of the mutation L89I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B89L89ICttAtt1112All0.000002
ORF1ab/nsp5A-B89L89ICtTAtA112All0
ORF1ab/nsp5A-B89L89ICttAtt44B.1.4290.000094
ORF1ab/nsp5A-B89L89ICttAtt11AY.1030.000006
ORF1ab/nsp5A-B89L89ICttAtt11AY.250.000006
ORF1ab/nsp5A-B89L89ICttAtt11AY.260.000028
ORF1ab/nsp5A-B89L89ICttAtt11AY.610.000105
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1.3120.001912
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1.70.000001
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1770.000013
ORF1ab/nsp5A-B89L89ICtTAtA11C.350.000774