CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = L58I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B58L58IL3321InonsynCtcAtc11100.90909110226-10228
ORF1ab/nsp5A-B58L58IL3321InonsynCtCAtT1110.090909110226-10228

Details of the mutation L58I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B58L58ICtcAtc1011All0.000002
ORF1ab/nsp5A-B58L58ICtCAtT111All0
ORF1ab/nsp5A-B58L58ICtcAtc230.111111
ORF1ab/nsp5A-B58L58ICtCAtT130.055556
ORF1ab/nsp5A-B58L58ICtcAtc22B.1.1.3120.003824
ORF1ab/nsp5A-B58L58ICtcAtc11AY.1030.000006
ORF1ab/nsp5A-B58L58ICtcAtc11AY.390.000025
ORF1ab/nsp5A-B58L58ICtcAtc11AY.40.000002
ORF1ab/nsp5A-B58L58ICtcAtc11AY.440.000006
ORF1ab/nsp5A-B58L58ICtcAtc11B.1.2210.000071
ORF1ab/nsp5A-B58L58ICtcAtc11B.1.4290.000024