CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = L32L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B32L32LL3295LsynctTctC5425130.94649410148-10150
ORF1ab/nsp5A-B32L32LL3295LsynctTctA542190.035055410148-10150
ORF1ab/nsp5A-B32L32LL3295LsynctTctG54290.016605210148-10150
ORF1ab/nsp5A-B32L32LL3295LsynCtTTtA54210.0018450210148-10150

Details of the mutation L32L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B32L32LctTctC513542All0.000098
ORF1ab/nsp5A-B32L32LctTctA19542All0.000004
ORF1ab/nsp5A-B32L32LctTctG9542All0.000002
ORF1ab/nsp5A-B32L32LCtTTtA1542All0
ORF1ab/nsp5A-B32L32LctTctC147147B.1.1.2940.186076
ORF1ab/nsp5A-B32L32LctTctC142142B.1.20.00125
ORF1ab/nsp5A-B32L32LctTctC4343M.11
ORF1ab/nsp5A-B32L32LctTctC1526B.1.1.70.000013
ORF1ab/nsp5A-B32L32LctTctA1026B.1.1.70.000009
ORF1ab/nsp5A-B32L32LctTctG126B.1.1.70.000001
ORF1ab/nsp5A-B32L32LctTctC2020AY.420.000805
ORF1ab/nsp5A-B32L32LctTctC1818B.1.5960.001568
ORF1ab/nsp5A-B32L32LctTctC1818B.1.617.20.000068
ORF1ab/nsp5A-B32L32LctTctC1616AY.1030.000099
ORF1ab/nsp5A-B32L32LctTctC1416AY.40.000022
ORF1ab/nsp5A-B32L32LctTctA116AY.40.000002
ORF1ab/nsp5A-B32L32LCtTTtA116AY.40.000002
ORF1ab/nsp5A-B32L32LctTctC1214B.10.00011
ORF1ab/nsp5A-B32L32LctTctG114B.10.000009
ORF1ab/nsp5A-B32L32LctTctA114B.10.000009
ORF1ab/nsp5A-B32L32LctTctC88AY.1190.000282
ORF1ab/nsp5A-B32L32LctTctC77AY.250.000042
ORF1ab/nsp5A-B32L32LctTctG47AY.30.00004
ORF1ab/nsp5A-B32L32LctTctC37AY.30.00003
ORF1ab/nsp5A-B32L32LctTctC77B.1.10.000127
ORF1ab/nsp5A-B32L32LctTctC66AY.1200.000223
ORF1ab/nsp5A-B32L32LctTctC34AY.430.000013
ORF1ab/nsp5A-B32L32LctTctG14AY.430.000004
ORF1ab/nsp5A-B32L32LctTctC44AY.98.10.000194
ORF1ab/nsp5A-B32L32LctTctC33AY.200.000117
ORF1ab/nsp5A-B32L32LctTctC33AY.330.0002
ORF1ab/nsp5A-B32L32LctTctC33AY.610.000314
ORF1ab/nsp5A-B32L32LctTctA33B.1.6270.006061
ORF1ab/nsp5A-B32L32LctTctC22AY.10.000791
ORF1ab/nsp5A-B32L32LctTctC22AY.440.000012
ORF1ab/nsp5A-B32L32LctTctC22AY.730.001331
ORF1ab/nsp5A-B32L32LctTctC11A.10.000282
ORF1ab/nsp5A-B32L32LctTctC11AY.1020.000027
ORF1ab/nsp5A-B32L32LctTctC11AY.1050.000643
ORF1ab/nsp5A-B32L32LctTctA11AY.4.50.000107
ORF1ab/nsp5A-B32L32LctTctA11AY.400.000964
ORF1ab/nsp5A-B32L32LctTctC11AY.50.000021
ORF1ab/nsp5A-B32L32LctTctC11AY.90.000068
ORF1ab/nsp5A-B32L32LctTctC11B0.000128
ORF1ab/nsp5A-B32L32LctTctC11B.1.1.10.000327
ORF1ab/nsp5A-B32L32LctTctC11B.1.1.2220.000204
ORF1ab/nsp5A-B32L32LctTctG11B.1.1280.000635
ORF1ab/nsp5A-B32L32LctTctC11B.1.2030.0625
ORF1ab/nsp5A-B32L32LctTctA11B.1.4130.004255
ORF1ab/nsp5A-B32L32LctTctC11B.1.4260.001009
ORF1ab/nsp5A-B32L32LctTctC11B.1.4270.00005
ORF1ab/nsp5A-B32L32LctTctC11B.1.466.20.000391
ORF1ab/nsp5A-B32L32LctTctC11B.380.02381
ORF1ab/nsp5A-B32L32LctTctC11D.20.000075
ORF1ab/nsp5A-B32L32LctTctG11P.10.000016
ORF1ab/nsp5A-B32L32LctTctC11P.1.150.000232
ORF1ab/nsp5A-B32L32LctTctA11R.10.00009