CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 90 | K90R | K3353R | nonsyn | aAg | aGg | 117800 | 117758 | 0.999643 | 10322-10324 |
ORF1ab/nsp5A-B | 90 | K90R | K3353R | nonsyn | aAG | aGA | 117800 | 42 | 0.000356537 | 10322-10324 |
Details of the mutation K90R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 117758 | 117800 | All | 0.022523 |
ORF1ab/nsp5A-B | 90 | K90R | aAG | aGA | 42 | 117800 | All | 0.000008 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 33100 | 33134 | B.1.351 | 0.983948 |
ORF1ab/nsp5A-B | 90 | K90R | aAG | aGA | 34 | 33134 | B.1.351 | 0.001011 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15819 | 15819 | B.1.1.7 | 0.014162 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7631 | 7631 | AY.4 | 0.011877 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6205 | 6205 | AY.113 | 0.883526 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3295 | 3295 | B.1.351.2 | 0.996974 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3117 | 3117 | AY.70 | 0.649917 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3049 | 3049 | B.1 | 0.027927 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2965 | 2965 | AY.102 | 0.078614 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2483 | 2483 | B.1.561 | 0.985709 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2440 | 2440 | AY.120 | 0.090716 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1997 | 1997 | B.1.582 | 0.979882 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1946 | 1946 | AY.46.4 | 0.320118 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1783 | 1783 | B.1.617.2 | 0.006714 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1658 | 1658 | B.1.351.5 | 0.994005 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1271 | 1271 | P.1 | 0.020023 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1139 | 1139 | B.1.351.3 | 0.998247 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1040 | 1040 | AY.44 | 0.00633 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 979 | 979 | AY.29 | 0.015442 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 963 | 963 | AY.43 | 0.004267 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 887 | 887 | B.1.568 | 0.985556 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 881 | 882 | AY.103 | 0.00547 |
ORF1ab/nsp5A-B | 90 | K90R | aAG | aGA | 1 | 882 | AY.103 | 0.000006 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 831 | 831 | B.1.177.18 | 0.964037 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 824 | 824 | B.1.36.22 | 0.995169 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 764 | 764 | B.1.404 | 0.994792 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 755 | 762 | B.1.361 | 0.972938 |
ORF1ab/nsp5A-B | 90 | K90R | aAG | aGA | 7 | 762 | B.1.361 | 0.009021 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 759 | 759 | Q.3 | 0.11008 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 667 | 667 | AY.25 | 0.004012 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 652 | 652 | AY.39 | 0.016112 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 535 | 535 | AY.42 | 0.021523 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 521 | 521 | B.1.1 | 0.009451 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 490 | 490 | AY.73 | 0.326015 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 463 | 463 | B.1.36.21 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 412 | 412 | B.1.625 | 0.969412 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 404 | 404 | AY.3 | 0.004018 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 402 | 402 | B.1.526 | 0.009449 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 377 | 377 | AY.9.2 | 0.013847 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 374 | 374 | B.1.612 | 0.992042 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 368 | 368 | B.1.258 | 0.024489 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 359 | 359 | B.1.429 | 0.008447 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 332 | 332 | B.1.427 | 0.016765 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 319 | 319 | B.1.1.519 | 0.012668 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 304 | 304 | B.1.36.36 | 0.183022 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 288 | 288 | B.1.177 | 0.003792 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 284 | 284 | B.1.160 | 0.008857 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 281 | 281 | AY.33 | 0.018765 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 259 | 259 | AY.6 | 0.010652 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 255 | 255 | B.1.1.329 | 0.980769 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 253 | 253 | B.1.279 | 0.129944 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 234 | 234 | AY.47 | 0.007279 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 217 | 217 | AY.114 | 0.05015 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 200 | 200 | AD.2 | 0.043792 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 170 | 170 | AY.119 | 0.006002 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 168 | 168 | AY.75 | 0.009412 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 168 | 168 | P.1.1 | 0.053367 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 162 | 162 | AY.5 | 0.003345 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 153 | 153 | AY.20 | 0.005946 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 153 | 153 | AY.26 | 0.004331 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 153 | 153 | B.1.573 | 0.932927 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 151 | 151 | AY.46 | 0.015716 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 148 | 148 | C.37 | 0.017177 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 144 | 144 | AY.83 | 0.248276 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 141 | 141 | AY.4.2 | 0.003058 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 141 | 141 | B.1.580 | 0.573171 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 138 | 138 | AY.45 | 0.016792 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 133 | 133 | B.1.1.526 | 0.471631 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 125 | 125 | AY.39.1 | 0.004952 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 124 | 124 | B.1.1.348 | 0.098726 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 120 | 120 | B.1.111 | 0.141011 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 116 | 116 | B.1.258.11 | 0.045977 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 112 | 112 | C.35 | 0.086687 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 111 | 111 | B.1.621 | 0.009826 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 109 | 109 | AY.54 | 0.010393 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 107 | 107 | B.1.2 | 0.000942 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 101 | 101 | B.1.1.28 | 0.031435 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 94 | 94 | B.1.523 | 0.230392 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 93 | 93 | Q.8 | 0.015336 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 91 | 91 | AY.14 | 0.008009 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 91 | 91 | AY.4.2.1 | 0.013558 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 91 | 91 | B.1.177.54 | 0.055185 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 89 | 89 | B.1.581 | 0.839623 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 87 | 87 | AY.100 | 0.004003 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 85 | 85 | B.1.1.282 | 0.988372 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 83 | 83 | AY.98.1 | 0.00402 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 83 | 83 | B.1.1.50 | 0.056348 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 82 | 82 | AY.117 | 0.00693 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 81 | 81 | AY.67 | 0.037604 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 80 | 80 | P.1.14 | 0.003824 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 77 | 77 | P.1.15 | 0.01789 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 76 | 76 | R.1 | 0.006841 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 74 | 74 | P.1.7 | 0.023627 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 73 | 73 | B.1.243 | 0.00508 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 72 | 72 | B.1.438.1 | 0.007723 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 71 | 71 | B.1.221 | 0.005043 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 69 | 69 | B.1.243.2 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 66 | 66 | AY.90 | 0.045175 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 64 | 64 | B.1.1.351 | 0.178771 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 64 | 64 | P.1.10 | 0.017246 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 63 | 63 | B.1.234 | 0.008312 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 63 | 63 | B.1.525 | 0.007129 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 62 | 62 | B.1.1.317 | 0.025525 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 61 | 61 | B.1.524 | 0.085795 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 60 | 60 | B.1.1.222 | 0.01224 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 60 | 60 | B.1.1.355 | 0.923077 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 58 | 58 | B.1.575 | 0.017597 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 53 | 53 | AY.23 | 0.003697 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 53 | 53 | AY.61 | 0.005553 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 51 | 51 | AY.99.2 | 0.0047 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 50 | 50 | C.14 | 0.21645 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 49 | 49 | B.1.596 | 0.00427 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 48 | 48 | P.1.17 | 0.007764 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 47 | 47 | AY.36 | 0.006966 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 47 | 47 | AY.99 | 0.049318 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 47 | 47 | B.1.1.375 | 0.559524 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 45 | 45 | XA | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 44 | 44 | AY.46.3 | 0.041083 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 44 | 44 | B.1.1.265 | 0.138801 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 44 | 44 | B.1.1.418 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 43 | 43 | AY.69 | 0.008027 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 43 | 43 | B.1.1.306 | 0.018851 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 43 | 43 | B.1.177.10 | 0.037752 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 43 | 43 | B.1.617.1 | 0.005546 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 42 | 42 | P.2 | 0.007839 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 40 | 40 | AY.27 | 0.002589 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 39 | 39 | B.1.1.432 | 0.049367 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 39 | 39 | B.1.637 | 0.00285 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 38 | 38 | AY.4.5 | 0.004085 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 38 | 38 | AY.9.1 | 0.003182 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 37 | 37 | AY.53 | 0.010638 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 37 | 37 | B.1.1.25 | 0.021035 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 37 | 37 | B.1.1.328 | 0.627119 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 36 | 36 | Q.1 | 0.004548 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 35 | 35 | AY.12 | 0.011062 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 35 | 35 | AY.46.6 | 0.002527 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 35 | 35 | B.1.177.60 | 0.007645 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 34 | 34 | AY.98 | 0.002686 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 34 | 34 | B.1.1.214 | 0.001886 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 33 | 33 | B.1.1.434 | 0.011502 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 33 | 33 | B.1.36.29 | 0.017072 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 32 | 32 | AY.118 | 0.002005 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 32 | 32 | B.1.1.255 | 0.09697 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 32 | 32 | B.1.177.81 | 0.006058 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 32 | 32 | B.1.324 | 0.051364 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 31 | 31 | B.1.1.216 | 0.027605 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 30 | 30 | B.1.1.207 | 0.035461 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 29 | 29 | AY.74 | 0.003354 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 29 | 29 | B.1.1.119 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 29 | 29 | B.1.1.311 | 0.010387 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 29 | 29 | B.1.620 | 0.027436 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 28 | 28 | AY.121 | 0.003789 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 28 | 28 | B.1.1.33 | 0.011785 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 28 | 28 | B.1.564.1 | 0.044164 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 28 | 28 | B.40 | 0.0102 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 27 | 27 | AY.34 | 0.002618 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 27 | 27 | AY.34.1 | 0.013768 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 27 | 27 | P.1.12 | 0.013069 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 26 | 26 | AY.5.3 | 0.008772 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 26 | 26 | AY.84 | 0.011374 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 26 | 26 | B.1.1.44 | 0.062651 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 26 | 26 | B.1.351.1 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 25 | 25 | AY.109 | 0.018491 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 25 | 25 | B.1.1.333 | 0.026911 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 25 | 25 | B.1.170 | 0.107759 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 25 | 25 | C.16 | 0.026511 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 24 | 24 | B.1.1.319 | 0.421053 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 24 | 24 | B.1.177.73 | 0.01359 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 24 | 24 | B.1.221.3 | 0.02 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 24 | 24 | B.1.241 | 0.019481 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 23 | 23 | AY.120.1 | 0.007384 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 23 | 23 | AY.41 | 0.006761 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 23 | 23 | B.1.1.1 | 0.007514 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 22 | 22 | AY.111 | 0.004029 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 22 | 22 | AY.92 | 0.00632 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 22 | 22 | B | 0.002812 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 22 | 22 | B.1.1.70 | 0.007503 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 22 | 22 | B.1.258.17 | 0.002287 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | AY.32 | 0.01065 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.1.1.63 | 0.007716 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.1.240 | 0.004311 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.1.349 | 0.014296 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.1.36 | 0.002918 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.33 | 0.425532 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 20 | 20 | B.6.6 | 0.017778 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 19 | 19 | B.1.1.39 | 0.009684 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 18 | 18 | AY.75.1 | 0.003246 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 18 | 18 | B.1.1.286 | 0.052174 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 17 | 17 | AY.9 | 0.001149 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 17 | 17 | B.1.1.284 | 0.001826 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 17 | 17 | B.1.36.17 | 0.008399 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | AY.101 | 0.007847 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | AY.116 | 0.004588 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | AY.3.1 | 0.001364 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | AY.5.4 | 0.004427 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | B.1.1.318 | 0.004828 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 16 | 16 | B.1.177.7 | 0.002638 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | A.23.1 | 0.010563 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | AY.18 | 0.151515 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | B.1.1.273 | 0.101351 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | B.1.1.369 | 0.006693 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | B.1.177.44 | 0.007784 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | B.1.638 | 0.789474 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | C.36.3 | 0.008508 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 15 | 15 | D.2 | 0.001126 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 14 | 14 | B.1.369 | 0.003993 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 14 | 14 | B.1.478 | 0.164706 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 14 | 14 | B.1.634 | 0.047945 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | AY.16.1 | 0.006109 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | AY.85 | 0.005553 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | B.1.177.4 | 0.002744 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | B.1.177.85 | 0.070652 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | B.1.470 | 0.018258 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | B.1.595 | 0.003392 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 13 | 13 | B.1.628 | 0.004581 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | A.2 | 0.007942 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.106 | 0.004019 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.16 | 0.004556 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.38 | 0.005991 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.68 | 0.003285 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.71 | 0.005701 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | AY.94 | 0.005312 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.1.241 | 0.024845 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.128 | 0.007624 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.160.29 | 0.050633 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.416 | 0.015228 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.531 | 1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.564 | 0.005111 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 12 | 12 | B.1.636 | 0.080537 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | A | 0.004257 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | AY.50 | 0.008793 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | AY.55 | 0.010092 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | AY.58 | 0.009982 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | AY.79 | 0.013317 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | B.1.1.416 | 0.009955 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | B.1.177.12 | 0.001669 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | B.1.36.8 | 0.011 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | B.1.565 | 0.008914 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 11 | 11 | B.1.590 | 0.05 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | A.2.5 | 0.00499 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | AY.13 | 0.00161 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | AY.29.1 | 0.002205 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.1.1.168 | 0.263158 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.1.1.280 | 0.030864 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.1.1.389 | 0.060606 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.1.1.429 | 0.046083 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.1.450 | 0.113636 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 10 | 10 | B.6.4 | 0.454545 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | A.28 | 0.02381 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | AY.105 | 0.005788 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | AY.120.2 | 0.011568 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | AY.30 | 0.003562 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | AY.46.5 | 0.001786 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | B.1.1.3 | 0.078261 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | B.1.1.409 | 0.025496 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | B.1.177.21 | 0.000688 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | B.1.177.46 | 0.008264 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 9 | 9 | B.1.232 | 0.004836 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | AY.1 | 0.003166 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | AY.37 | 0.002528 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | AY.52 | 0.006515 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | AY.87 | 0.006661 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | AY.93 | 0.002185 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.1.253 | 0.02005 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.1.431 | 0.129032 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.177.20 | 0.01214 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.408 | 0.02952 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.415.1 | 0.060606 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.428 | 0.008163 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.1.623 | 0.004292 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | B.3 | 0.006645 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | C.36 | 0.007286 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 8 | 8 | P.3 | 0.012759 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AE.5 | 0.12963 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.107 | 0.003262 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.116.1 | 0.00218 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.24 | 0.003017 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.46.2 | 0.004447 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.59 | 0.003708 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.63 | 0.002708 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.91 | 0.005113 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | AY.95 | 0.005327 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.1.294 | 0.008861 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.1.316 | 0.006475 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.1.67 | 0.031963 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.139 | 0.005132 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.206 | 0.00571 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.451 | 0.057377 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.453 | 0.022654 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.576 | 0.006346 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.621.1 | 0.003541 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | B.1.635 | 0.122807 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | N.5 | 0.012367 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | P.1.13 | 0.006289 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 7 | 7 | P.1.16 | 0.002619 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | A.27 | 0.009934 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AM.4 | 0.021429 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AY.108 | 0.006615 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AY.110 | 0.000676 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AY.19 | 0.006842 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AY.77 | 0.006764 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | AY.88 | 0.005305 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.170 | 0.007481 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.189 | 0.009077 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.37 | 0.001157 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.376 | 0.035714 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.448 | 0.012195 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.1.507 | 0.052174 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.124 | 0.046875 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.284 | 0.078947 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.311 | 0.001647 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.320 | 0.007472 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.396 | 0.004234 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.411 | 0.022222 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | B.1.448 | 0.015748 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | C.1.1 | 0.461538 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | C.39 | 0.113208 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 6 | 6 | D.5 | 0.029851 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.35 | 0.001165 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.57 | 0.003281 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.62 | 0.002179 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.64 | 0.002976 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.86 | 0.004149 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | AY.89 | 0.02451 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.1.181 | 0.022727 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.1.277 | 0.003794 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.177.32 | 0.006748 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.214.2 | 0.002998 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.281 | 0.108696 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.380 | 0.033113 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.497 | 0.001574 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.618 | 0.020161 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | B.1.627 | 0.010101 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | C.1 | 0.011962 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | C.37.1 | 0.013089 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | P.1.2 | 0.00578 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | P.5 | 0.068493 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 5 | 5 | Q.4 | 0.002274 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.10 | 0.00212 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.4.4 | 0.001637 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.51 | 0.003636 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.56 | 0.006421 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.65 | 0.002132 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | AY.97 | 0.006803 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.148 | 0.035088 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.157 | 0.003653 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.186 | 0.013746 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.326 | 0.007042 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.398 | 0.012903 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.420 | 0.004024 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.433 | 0.005698 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.464 | 0.005891 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.487 | 0.022346 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.517 | 0.027211 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.1.523 | 0.00625 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.146 | 0.016949 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.160.16 | 0.003717 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.160.22 | 0.027027 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.212 | 0.066667 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.258.14 | 0.003922 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.36.18 | 0.001681 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.367 | 0.00317 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.381 | 0.03125 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.389 | 0.004008 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.493 | 0.102564 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.499 | 0.004202 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.558 | 0.018265 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.575.1 | 0.009756 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.606 | 0.024096 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | B.4 | 0.00883 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | N.4 | 0.017021 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 4 | 4 | Q.7 | 0.004444 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | A.2.3 | 0.014218 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | A.2.5.1 | 0.014423 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | A.2.5.3 | 0.030928 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.23.1 | 0.001252 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.48 | 0.001395 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.49 | 0.009585 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.7 | 0.000588 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.7.1 | 0.000338 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.8 | 0.001818 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | AY.96 | 0.006224 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.141 | 0.006036 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.174 | 0.010135 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.269 | 0.00406 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.372 | 0.002066 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.377 | 0.004144 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.397 | 0.006757 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.47 | 0.016043 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.1.61 | 0.026316 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.160.26 | 0.007264 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.177.42 | 0.002683 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.177.52 | 0.005272 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.177.57 | 0.000843 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.36.1 | 0.003421 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.36.10 | 0.014354 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.366 | 0.014634 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.375 | 0.002459 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.459 | 0.012245 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.521 | 0.014925 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.546 | 0.011111 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.589 | 0.022727 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.78 | 0.025641 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | B.1.8 | 0.005917 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | C.2 | 0.048387 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | C.38 | 0.024194 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | N.3 | 0.017442 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 3 | 3 | N.6 | 0.021277 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | A.23 | 0.021053 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AY.28 | 0.003781 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AY.39.2 | 0.003082 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AY.4.3 | 0.001684 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AY.46.1 | 0.002053 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | AZ.1 | 0.001735 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.129 | 0.018349 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.135 | 0.00939 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.153 | 0.002191 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.171 | 0.007353 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.226 | 0.011628 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.301 | 0.002358 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.312 | 0.003824 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.335 | 0.025974 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.337 | 0.007194 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.339 | 0.021053 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.368 | 0.006173 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.374 | 0.004751 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.403 | 0.051282 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.485 | 0.033333 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.521 | 0.010695 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.54 | 0.006042 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.57 | 0.022989 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.1.71 | 0.012121 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.13 | 0.004751 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.157 | 0.00597 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.160.33 | 0.00885 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.160.8 | 0.002577 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.23 | 0.006472 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.3 | 0.015267 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.36 | 0.032258 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.75 | 0.002081 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.177.87 | 0.001456 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.214 | 0.007326 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.258.3 | 0.00335 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.336 | 0.004878 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.36.26 | 0.005714 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.370 | 0.016 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.398 | 0.005952 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.425 | 0.005988 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.501 | 0.014706 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.509 | 0.001732 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.516 | 0.003914 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.533 | 0.019231 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.542 | 0.0625 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.551 | 0.002581 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.600 | 0.011696 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.1.91 | 0.004149 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | B.52 | 0.020202 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | C.1.2 | 0.008511 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | K.1 | 0.047619 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | K.2 | 0.08 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | L.3 | 0.007092 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | N.9 | 0.011905 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | P.1.4 | 0.001953 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | P.7 | 0.008734 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 2 | 2 | V.2 | 0.064516 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | A.2.5.2 | 0.001572 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AA.1 | 0.007246 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AA.7 | 0.009174 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AD.1 | 0.004115 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AE.1 | 0.011364 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AE.7 | 0.083333 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AH.2 | 0.012048 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.5.1 | 0.003759 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.72 | 0.001361 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.82 | 0.001357 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.91.1 | 0.004065 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AZ.2 | 0.000821 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | AZ.5 | 0.003509 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.101 | 0.01 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.117 | 0.009709 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.132 | 0.014925 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.138 | 0.006061 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.144 | 0.028571 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.149 | 0.016393 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.15 | 0.013514 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.164 | 0.005155 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.193 | 0.111111 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.203 | 0.016949 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.213 | 0.021739 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.219 | 0.005 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.229 | 0.005747 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.240 | 0.004695 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.288 | 0.001916 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.309 | 0.005848 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.324 | 0.052632 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.327 | 0.1 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.336 | 0.016667 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.343 | 0.020833 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.350 | 0.04 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.353 | 0.020833 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.373 | 0.02381 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.380 | 0.009804 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.388 | 0.045455 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.391 | 0.008547 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.396 | 0.045455 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.40 | 0.034483 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.402 | 0.011111 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.406 | 0.006494 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.413 | 0.006897 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.414 | 0.142857 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.419 | 0.007407 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.437 | 0.010417 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.442 | 0.018519 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.49 | 0.017544 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.524 | 0.020833 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.56 | 0.017857 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.1.99 | 0.02381 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.127 | 0.002198 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.137 | 0.5 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.143 | 0.021277 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.160.17 | 0.001701 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.160.31 | 0.008065 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.26 | 0.006993 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.27 | 0.009434 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.5 | 0.001242 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.182 | 0.007246 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.190 | 0.01 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.214.3 | 0.007143 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.243.1 | 0.022222 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.247 | 0.014925 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.3 | 0.002618 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.340 | 0.004292 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.369.1 | 0.027027 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.37 | 0.014706 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.383 | 0.009009 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.40 | 0.019608 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.403 | 0.003268 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.424 | 0.008065 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.432 | 0.011236 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.437 | 0.020833 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.460 | 0.017857 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.489 | 0.043478 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.550 | 0.013699 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.554 | 0.004405 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.556 | 0.007519 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.569 | 0.014493 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.570 | 0.002941 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.587 | 0.001898 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.81 | 0.021277 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.1.94 | 0.027027 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.12 | 0.00641 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.3.1 | 0.001658 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.31 | 0.003731 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.4.4 | 0.018868 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.53 | 0.011765 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.56 | 0.028571 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | B.61 | 0.005747 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.11 | 0.010638 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.29 | 0.0625 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.30 | 0.001727 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.36.3.1 | 0.002717 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | C.6 | 0.037037 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | K.3 | 0.006173 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | P.1.5 | 0.076923 |
ORF1ab/nsp5A-B | 90 | K90R | aAg | aGg | 1 | 1 | P.1.8 | 0.004785 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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