CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = I249T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B249I249TI3512TnonsynaTaaCa461461110799-10801

Details of the mutation I249T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B249I249TaTaaCa461461All0.000088
ORF1ab/nsp5A-B249I249TaTaaCa267267AY.40.000416
ORF1ab/nsp5A-B249I249TaTaaCa5151B.1.4450.6
ORF1ab/nsp5A-B249I249TaTaaCa1515AY.1030.000093
ORF1ab/nsp5A-B249I249TaTaaCa1515B.1.617.20.000056
ORF1ab/nsp5A-B249I249TaTaaCa1313AY.390.000321
ORF1ab/nsp5A-B249I249TaTaaCa1212B.1.20.000106
ORF1ab/nsp5A-B249I249TaTaaCa88AY.430.000035
ORF1ab/nsp5A-B249I249TaTaaCa88B.10.000073
ORF1ab/nsp5A-B249I249TaTaaCa77B.1.3110.001922
ORF1ab/nsp5A-B249I249TaTaaCa66AY.440.000037
ORF1ab/nsp5A-B249I249TaTaaCa44AY.30.00004
ORF1ab/nsp5A-B249I249TaTaaCa44B.1.5650.003241
ORF1ab/nsp5A-B249I249TaTaaCa33AY.1180.000188
ORF1ab/nsp5A-B249I249TaTaaCa33AY.250.000018
ORF1ab/nsp5A-B249I249TaTaaCa220.111111
ORF1ab/nsp5A-B249I249TaTaaCa22AY.1020.000053
ORF1ab/nsp5A-B249I249TaTaaCa22AY.290.000032
ORF1ab/nsp5A-B249I249TaTaaCa22AY.420.00008
ORF1ab/nsp5A-B249I249TaTaaCa22AY.46.40.000329
ORF1ab/nsp5A-B249I249TaTaaCa22AY.50.000041
ORF1ab/nsp5A-B249I249TaTaaCa22B.1.10.000036
ORF1ab/nsp5A-B249I249TaTaaCa22B.1.1.70.000002
ORF1ab/nsp5A-B249I249TaTaaCa22B.1.1600.000062
ORF1ab/nsp5A-B249I249TaTaaCa22B.1.2430.000139
ORF1ab/nsp5A-B249I249TaTaaCa22B.1.3690.00057
ORF1ab/nsp5A-B249I249TaTaaCa11AY.1100.000113
ORF1ab/nsp5A-B249I249TaTaaCa11AY.1170.000085
ORF1ab/nsp5A-B249I249TaTaaCa11AY.200.000039
ORF1ab/nsp5A-B249I249TaTaaCa11AY.270.000065
ORF1ab/nsp5A-B249I249TaTaaCa11AY.380.000499
ORF1ab/nsp5A-B249I249TaTaaCa11AY.450.000122
ORF1ab/nsp5A-B249I249TaTaaCa11AY.460.000104
ORF1ab/nsp5A-B249I249TaTaaCa11AY.60.000041
ORF1ab/nsp5A-B249I249TaTaaCa11AY.610.000105
ORF1ab/nsp5A-B249I249TaTaaCa11AY.7.10.000113
ORF1ab/nsp5A-B249I249TaTaaCa11AY.90.000068
ORF1ab/nsp5A-B249I249TaTaaCa11AY.98.10.000048
ORF1ab/nsp5A-B249I249TaTaaCa11B0.000128
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.1.10.000327
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.1.250.000569
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.1.3160.000925
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.1.980.018519
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.230.006061
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.2580.000067
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.351.50.0006
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.4090.000781
ORF1ab/nsp5A-B249I249TaTaaCa11B.1.4360.001029
ORF1ab/nsp5A-B249I249TaTaaCa11L.20.011364