CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = G278R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B278G278RG3541RnonsynGgaAga4774670.97903610886-10888
ORF1ab/nsp5A-B278G278RG3541RnonsynGgaCga477100.020964410886-10888

Details of the mutation G278R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B278G278RGgaAga467477All0.000089
ORF1ab/nsp5A-B278G278RGgaCga10477All0.000002
ORF1ab/nsp5A-B278G278RGgaAga340340B.1.1.3030.939227
ORF1ab/nsp5A-B278G278RGgaAga2525B.1.2430.00174
ORF1ab/nsp5A-B278G278RGgaAga2324AY.30.000229
ORF1ab/nsp5A-B278G278RGgaCga124AY.30.00001
ORF1ab/nsp5A-B278G278RGgaAga1414B.10.000128
ORF1ab/nsp5A-B278G278RGgaAga1214B.1.1.70.000011
ORF1ab/nsp5A-B278G278RGgaCga214B.1.1.70.000002
ORF1ab/nsp5A-B278G278RGgaAga67AY.40.000009
ORF1ab/nsp5A-B278G278RGgaCga17AY.40.000002
ORF1ab/nsp5A-B278G278RGgaAga66B.1.10.000109
ORF1ab/nsp5A-B278G278RGgaAga66B.1.20.000053
ORF1ab/nsp5A-B278G278RGgaAga44B.1.177.70.000659
ORF1ab/nsp5A-B278G278RGgaAga33AY.1080.003308
ORF1ab/nsp5A-B278G278RGgaAga33B.1.1.630.001157
ORF1ab/nsp5A-B278G278RGgaCga220.111111
ORF1ab/nsp5A-B278G278RGgaAga22AY.250.000012
ORF1ab/nsp5A-B278G278RGgaAga22B.1.1.1590.009346
ORF1ab/nsp5A-B278G278RGgaAga22B.1.1.3330.002153
ORF1ab/nsp5A-B278G278RGgaAga22B.1.1770.000026
ORF1ab/nsp5A-B278G278RGgaAga12B.1.4270.00005
ORF1ab/nsp5A-B278G278RGgaCga12B.1.4270.00005
ORF1ab/nsp5A-B278G278RGgaAga22B.1.617.20.000008
ORF1ab/nsp5A-B278G278RGgaAga22D.20.00015
ORF1ab/nsp5A-B278G278RGgaAga11AY.1020.000027
ORF1ab/nsp5A-B278G278RGgaAga11AY.140.000088
ORF1ab/nsp5A-B278G278RGgaAga11AY.270.000065
ORF1ab/nsp5A-B278G278RGgaAga11AY.290.000016
ORF1ab/nsp5A-B278G278RGgaCga11AY.430.000004
ORF1ab/nsp5A-B278G278RGgaAga11AY.60.000041
ORF1ab/nsp5A-B278G278RGgaAga11B.1.1.1170.009709
ORF1ab/nsp5A-B278G278RGgaAga11B.1.1.280.000311
ORF1ab/nsp5A-B278G278RGgaCga11B.1.1.370.000193
ORF1ab/nsp5A-B278G278RGgaAga11B.1.1.4200.001006
ORF1ab/nsp5A-B278G278RGgaAga11B.1.1.4310.016129
ORF1ab/nsp5A-B278G278RGgaCga11B.1.177.80.000752
ORF1ab/nsp5A-B278G278RGgaAga11B.1.351.50.0006
ORF1ab/nsp5A-B278G278RGgaAga11B.1.4220.000812
ORF1ab/nsp5A-B278G278RGgaAga11B.1.5260.000024