CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = F66del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B66F66delF3329deldelTTC---3232110250-10252

Details of the mutation F66del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B66F66delTTC---3232All0.000006
ORF1ab/nsp5A-B66F66delTTC---99B.1.1.70.000008
ORF1ab/nsp5A-B66F66delTTC---440.222222
ORF1ab/nsp5A-B66F66delTTC---33AY.40.000005
ORF1ab/nsp5A-B66F66delTTC---22AY.4.50.000215
ORF1ab/nsp5A-B66F66delTTC---22B.1.1770.000026
ORF1ab/nsp5A-B66F66delTTC---11AY.1000.000046
ORF1ab/nsp5A-B66F66delTTC---11AY.1170.000085
ORF1ab/nsp5A-B66F66delTTC---11AY.430.000004
ORF1ab/nsp5A-B66F66delTTC---11B.1.177.40.000211
ORF1ab/nsp5A-B66F66delTTC---11B.1.177.810.000189
ORF1ab/nsp5A-B66F66delTTC---11B.1.1790.003759
ORF1ab/nsp5A-B66F66delTTC---11B.1.36.180.00042
ORF1ab/nsp5A-B66F66delTTC---11B.1.5960.000087
ORF1ab/nsp5A-B66F66delTTC---11B.1.617.20.000004
ORF1ab/nsp5A-B66F66delTTC---11B.1.6210.000089
ORF1ab/nsp5A-B66F66delTTC---11C.350.000774
ORF1ab/nsp5A-B66F66delTTC---11N.40.004255