CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = F66S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B66F66SF3329SnonsyntTctCc14120.85714310250-10252
ORF1ab/nsp5A-B66F66SF3329SnonsyntTCtCT1420.14285710250-10252

Details of the mutation F66S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B66F66StTctCc1214All0.000002
ORF1ab/nsp5A-B66F66StTCtCT214All0
ORF1ab/nsp5A-B66F66StTctCc33B.10.000027
ORF1ab/nsp5A-B66F66StTCtCT120.055556
ORF1ab/nsp5A-B66F66StTctCc120.055556
ORF1ab/nsp5A-B66F66StTctCc22D.20.00015
ORF1ab/nsp5A-B66F66StTctCc11AY.40.000002
ORF1ab/nsp5A-B66F66StTCtCT11AY.820.001357
ORF1ab/nsp5A-B66F66StTctCc11B.1.1.70.000001
ORF1ab/nsp5A-B66F66StTctCc11B.400.000364
ORF1ab/nsp5A-B66F66StTctCc11C.160.00106
ORF1ab/nsp5A-B66F66StTctCc11C.36.10.004149
ORF1ab/nsp5A-B66F66StTctCc11P.10.000016