CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = F66F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B66F66FF3329FsynttCttT92129212110250-10252

Details of the mutation F66F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B66F66FttCttT92129212All0.001762
ORF1ab/nsp5A-B66F66FttCttT30713071B.1.1.70.002749
ORF1ab/nsp5A-B66F66FttCttT439439AY.4.20.009521
ORF1ab/nsp5A-B66F66FttCttT396396AY.40.000616
ORF1ab/nsp5A-B66F66FttCttT380380C.180.984456
ORF1ab/nsp5A-B66F66FttCttT356356B.1.20.003135
ORF1ab/nsp5A-B66F66FttCttT334334AY.440.002033
ORF1ab/nsp5A-B66F66FttCttT283283B.1.617.20.001066
ORF1ab/nsp5A-B66F66FttCttT229229B.1.1.5190.009094
ORF1ab/nsp5A-B66F66FttCttT219219B.1.3510.00651
ORF1ab/nsp5A-B66F66FttCttT209209B.1.4290.004918
ORF1ab/nsp5A-B66F66FttCttT168168AY.1030.001043
ORF1ab/nsp5A-B66F66FttCttT137137B.1.1770.001804
ORF1ab/nsp5A-B66F66FttCttT127127AY.470.00395
ORF1ab/nsp5A-B66F66FttCttT123123AY.30.001223
ORF1ab/nsp5A-B66F66FttCttT119119P.10.001875
ORF1ab/nsp5A-B66F66FttCttT115115AY.250.000692
ORF1ab/nsp5A-B66F66FttCttT109109B.1.10.001977
ORF1ab/nsp5A-B66F66FttCttT9797AY.4.2.10.014452
ORF1ab/nsp5A-B66F66FttCttT8888AY.430.00039
ORF1ab/nsp5A-B66F66FttCttT8383AY.120.026233
ORF1ab/nsp5A-B66F66FttCttT8282B.10.000751
ORF1ab/nsp5A-B66F66FttCttT8282B.1.6310.276094
ORF1ab/nsp5A-B66F66FttCttT7474B.1.1.10.024175
ORF1ab/nsp5A-B66F66FttCttT6868AY.230.004743
ORF1ab/nsp5A-B66F66FttCttT6666B.1.1.2220.013464
ORF1ab/nsp5A-B66F66FttCttT6565B.1.1.470.347594
ORF1ab/nsp5A-B66F66FttCttT6464B.1.1.2840.006874
ORF1ab/nsp5A-B66F66FttCttT5656B.1.1600.001747
ORF1ab/nsp5A-B66F66FttCttT4949B.1.5260.001152
ORF1ab/nsp5A-B66F66FttCttT4848AY.75.10.008655
ORF1ab/nsp5A-B66F66FttCttT4141AY.1180.002569
ORF1ab/nsp5A-B66F66FttCttT4141AY.290.000647
ORF1ab/nsp5A-B66F66FttCttT4141B.1.6161
ORF1ab/nsp5A-B66F66FttCttT3939AY.200.001516
ORF1ab/nsp5A-B66F66FttCttT3838AY.1020.001008
ORF1ab/nsp5A-B66F66FttCttT3737AY.330.002471
ORF1ab/nsp5A-B66F66FttCttT3434C.190.918919
ORF1ab/nsp5A-B66F66FttCttT3131B.1.177.370.837838
ORF1ab/nsp5A-B66F66FttCttT3030AY.9.20.001102
ORF1ab/nsp5A-B66F66FttCttT2828AY.60.001152
ORF1ab/nsp5A-B66F66FttCttT2424B.1.1.4830.923077
ORF1ab/nsp5A-B66F66FttCttT2424B.1.177.810.004544
ORF1ab/nsp5A-B66F66FttCttT2424B.1.3960.016937
ORF1ab/nsp5A-B66F66FttCttT2323B.1.2430.0016
ORF1ab/nsp5A-B66F66FttCttT2222AY.390.000544
ORF1ab/nsp5A-B66F66FttCttT2222B.1.2210.001563
ORF1ab/nsp5A-B66F66FttCttT1919AY.460.001978
ORF1ab/nsp5A-B66F66FttCttT1919B.1.6210.001682
ORF1ab/nsp5A-B66F66FttCttT1717B.1.1.330.007155
ORF1ab/nsp5A-B66F66FttCttT1616AY.1000.000736
ORF1ab/nsp5A-B66F66FttCttT1616AY.260.000453
ORF1ab/nsp5A-B66F66FttCttT1515AY.450.001825
ORF1ab/nsp5A-B66F66FttCttT1515AY.46.60.001083
ORF1ab/nsp5A-B66F66FttCttT1515AY.99.20.001382
ORF1ab/nsp5A-B66F66FttCttT1515B.1.360.002189
ORF1ab/nsp5A-B66F66FttCttT1515R.10.00135
ORF1ab/nsp5A-B66F66FttCttT1414AY.1110.002564
ORF1ab/nsp5A-B66F66FttCttT1414B.1.2580.000932
ORF1ab/nsp5A-B66F66FttCttT1414B.1.4270.000707
ORF1ab/nsp5A-B66F66FttCttT1414B.1.6370.001023
ORF1ab/nsp5A-B66F66FttCttT1414Q.10.001769
ORF1ab/nsp5A-B66F66FttCttT1414Q.80.002309
ORF1ab/nsp5A-B66F66FttCttT1212AY.740.001388
ORF1ab/nsp5A-B66F66FttCttT1111AY.1200.000409
ORF1ab/nsp5A-B66F66FttCttT1111AY.50.000227
ORF1ab/nsp5A-B66F66FttCttT1111AY.980.000869
ORF1ab/nsp5A-B66F66FttCttT1111B.1.1.2140.00061
ORF1ab/nsp5A-B66F66FttCttT1111B.1.177.750.011446
ORF1ab/nsp5A-B66F66FttCttT1111C.200.846154
ORF1ab/nsp5A-B66F66FttCttT1010AY.39.1.10.007246
ORF1ab/nsp5A-B66F66FttCttT1010B.1.351.20.003026
ORF1ab/nsp5A-B66F66FttCttT1010B.1.438.10.001073
ORF1ab/nsp5A-B66F66FttCttT1010C.50.909091
ORF1ab/nsp5A-B66F66FttCttT99AY.1210.001218
ORF1ab/nsp5A-B66F66FttCttT99AY.910.006574
ORF1ab/nsp5A-B66F66FttCttT99B.30.007475
ORF1ab/nsp5A-B66F66FttCttT99C.370.001045
ORF1ab/nsp5A-B66F66FttCttT99P.1.170.001456
ORF1ab/nsp5A-B66F66FttCttT88AY.420.000322
ORF1ab/nsp5A-B66F66FttCttT88AY.750.000448
ORF1ab/nsp5A-B66F66FttCttT88B.1.1990.033058
ORF1ab/nsp5A-B66F66FttCttT88B.1.2400.001725
ORF1ab/nsp5A-B66F66FttCttT88B.1.3290.00486
ORF1ab/nsp5A-B66F66FttCttT88B.1.5650.006483
ORF1ab/nsp5A-B66F66FttCttT88C.140.034632
ORF1ab/nsp5A-B66F66FttCttT88D.20.0006
ORF1ab/nsp5A-B66F66FttCttT88P.1.70.002554
ORF1ab/nsp5A-B66F66FttCttT77AY.1190.000247
ORF1ab/nsp5A-B66F66FttCttT77AY.270.000453
ORF1ab/nsp5A-B66F66FttCttT77AY.3.10.000597
ORF1ab/nsp5A-B66F66FttCttT77AY.610.000733
ORF1ab/nsp5A-B66F66FttCttT77B.1.1.3170.002882
ORF1ab/nsp5A-B66F66FttCttT77B.1.2340.000924
ORF1ab/nsp5A-B66F66FttCttT77B.1.6090.003356
ORF1ab/nsp5A-B66F66FttCttT66AY.1160.001721
ORF1ab/nsp5A-B66F66FttCttT66B.1.1.3720.004132
ORF1ab/nsp5A-B66F66FttCttT66B.1.1.4060.038961
ORF1ab/nsp5A-B66F66FttCttT66B.1.177.70.000989
ORF1ab/nsp5A-B66F66FttCttT66B.1.2600.020067
ORF1ab/nsp5A-B66F66FttCttT66B.1.4090.004687
ORF1ab/nsp5A-B66F66FttCttT66B.1.4970.001889
ORF1ab/nsp5A-B66F66FttCttT66B.1.5250.000679
ORF1ab/nsp5A-B66F66FttCttT66B.1.6280.002114
ORF1ab/nsp5A-B66F66FttCttT66P.1.140.000287
ORF1ab/nsp5A-B66F66FttCttT55AY.1060.001674
ORF1ab/nsp5A-B66F66FttCttT55AY.360.000741
ORF1ab/nsp5A-B66F66FttCttT55B.1.1.2430.020408
ORF1ab/nsp5A-B66F66FttCttT55B.1.1.250.002843
ORF1ab/nsp5A-B66F66FttCttT55B.1.1.3110.001791
ORF1ab/nsp5A-B66F66FttCttT55B.1.177.440.002595
ORF1ab/nsp5A-B66F66FttCttT55B.1.3610.006443
ORF1ab/nsp5A-B66F66FttCttT55B.1.3690.001426
ORF1ab/nsp5A-B66F66FttCttT55B.1.5880.00455
ORF1ab/nsp5A-B66F66FttCttT55B.1.5960.000436
ORF1ab/nsp5A-B66F66FttCttT44A.2.50.001996
ORF1ab/nsp5A-B66F66FttCttT44AY.1130.00057
ORF1ab/nsp5A-B66F66FttCttT44AY.4.40.001637
ORF1ab/nsp5A-B66F66FttCttT44AY.4.50.00043
ORF1ab/nsp5A-B66F66FttCttT44AY.46.50.000794
ORF1ab/nsp5A-B66F66FttCttT44AY.530.00115
ORF1ab/nsp5A-B66F66FttCttT44AY.70.000784
ORF1ab/nsp5A-B66F66FttCttT44AY.920.001149
ORF1ab/nsp5A-B66F66FttCttT44B.1.1.1700.004988
ORF1ab/nsp5A-B66F66FttCttT44B.1.1.3180.001207
ORF1ab/nsp5A-B66F66FttCttT44B.1.1.4640.005891
ORF1ab/nsp5A-B66F66FttCttT44B.1.1.520.04878
ORF1ab/nsp5A-B66F66FttCttT44B.1.177.60.003906
ORF1ab/nsp5A-B66F66FttCttT44B.1.177.650.002661
ORF1ab/nsp5A-B66F66FttCttT44B.1.5460.014815
ORF1ab/nsp5A-B66F66FttCttT44C.360.003643
ORF1ab/nsp5A-B66F66FttCttT44P.30.00638
ORF1ab/nsp5A-B66F66FttCttT33AY.1090.002219
ORF1ab/nsp5A-B66F66FttCttT33AY.1170.000254
ORF1ab/nsp5A-B66F66FttCttT33AY.20.001068
ORF1ab/nsp5A-B66F66FttCttT33AY.39.10.000119
ORF1ab/nsp5A-B66F66FttCttT33AY.540.000286
ORF1ab/nsp5A-B66F66FttCttT33AY.7.10.000338
ORF1ab/nsp5A-B66F66FttCttT33AY.710.001425
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.2160.002671
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.280.000934
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.2970.006711
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.3160.002775
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.3480.002389
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.630.001157
ORF1ab/nsp5A-B66F66FttCttT33B.1.1.700.001023
ORF1ab/nsp5A-B66F66FttCttT33B.1.110.30.002155
ORF1ab/nsp5A-B66F66FttCttT33B.1.160.70.006237
ORF1ab/nsp5A-B66F66FttCttT33B.1.177.210.000229
ORF1ab/nsp5A-B66F66FttCttT33B.1.2140.010989
ORF1ab/nsp5A-B66F66FttCttT33B.1.2320.001612
ORF1ab/nsp5A-B66F66FttCttT33B.1.36.170.001482
ORF1ab/nsp5A-B66F66FttCttT33B.1.3930.085714
ORF1ab/nsp5A-B66F66FttCttT33B.1.4130.012766
ORF1ab/nsp5A-B66F66FttCttT33B.1.4800.007463
ORF1ab/nsp5A-B66F66FttCttT33P.60.009434
ORF1ab/nsp5A-B66F66FttCttT33Q.30.000435
ORF1ab/nsp5A-B66F66FttCttT33Q.40.001364
ORF1ab/nsp5A-B66F66FttCttT22AT.10.010256
ORF1ab/nsp5A-B66F66FttCttT22AY.140.000176
ORF1ab/nsp5A-B66F66FttCttT22AY.46.40.000329
ORF1ab/nsp5A-B66F66FttCttT22AY.5.30.000675
ORF1ab/nsp5A-B66F66FttCttT22AY.570.001312
ORF1ab/nsp5A-B66F66FttCttT22AY.90.000135
ORF1ab/nsp5A-B66F66FttCttT22AY.98.10.000097
ORF1ab/nsp5A-B66F66FttCttT22B0.000256
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.1570.001826
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.2320.00363
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.2940.002532
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.370.000386
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.390.001019
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.4300.083333
ORF1ab/nsp5A-B66F66FttCttT22B.1.1.4340.000697
ORF1ab/nsp5A-B66F66FttCttT22B.1.1390.001466
ORF1ab/nsp5A-B66F66FttCttT22B.1.160.110.011429
ORF1ab/nsp5A-B66F66FttCttT22B.1.160.160.001859
ORF1ab/nsp5A-B66F66FttCttT22B.1.177.120.000303
ORF1ab/nsp5A-B66F66FttCttT22B.1.177.570.000562
ORF1ab/nsp5A-B66F66FttCttT22B.1.177.580.002663
ORF1ab/nsp5A-B66F66FttCttT22B.1.177.820.000955
ORF1ab/nsp5A-B66F66FttCttT22B.1.220.002635
ORF1ab/nsp5A-B66F66FttCttT22B.1.258.170.000208
ORF1ab/nsp5A-B66F66FttCttT22B.1.3110.000549
ORF1ab/nsp5A-B66F66FttCttT22B.1.3460.002621
ORF1ab/nsp5A-B66F66FttCttT22B.1.36.360.001204
ORF1ab/nsp5A-B66F66FttCttT22B.1.362.20.009434
ORF1ab/nsp5A-B66F66FttCttT22B.1.3890.002004
ORF1ab/nsp5A-B66F66FttCttT22B.1.4000.000858
ORF1ab/nsp5A-B66F66FttCttT22B.1.4020.019608
ORF1ab/nsp5A-B66F66FttCttT22B.1.416.10.003125
ORF1ab/nsp5A-B66F66FttCttT22B.1.5750.000607
ORF1ab/nsp5A-B66F66FttCttT22B.1.5820.000981
ORF1ab/nsp5A-B66F66FttCttT22B.1.621.10.001012
ORF1ab/nsp5A-B66F66FttCttT22C.10.004785
ORF1ab/nsp5A-B66F66FttCttT22D.50.00995
ORF1ab/nsp5A-B66F66FttCttT22P.1.120.000968
ORF1ab/nsp5A-B66F66FttCttT22P.1.150.000465
ORF1ab/nsp5A-B66F66FttCttT22P.1.160.000748
ORF1ab/nsp5A-B66F66FttCttT22P.1.20.002312
ORF1ab/nsp5A-B66F66FttCttT22P.1.80.009569
ORF1ab/nsp5A-B66F66FttCttT22W.40.002703
ORF1ab/nsp5A-B66F66FttCttT110.055556
ORF1ab/nsp5A-B66F66FttCttT11A.2.5.20.001572
ORF1ab/nsp5A-B66F66FttCttT11A.2.5.30.010309
ORF1ab/nsp5A-B66F66FttCttT11A.270.001656
ORF1ab/nsp5A-B66F66FttCttT11A.290.005319
ORF1ab/nsp5A-B66F66FttCttT11AD.20.000219
ORF1ab/nsp5A-B66F66FttCttT11AE.80.000489
ORF1ab/nsp5A-B66F66FttCttT11AW.10.003049
ORF1ab/nsp5A-B66F66FttCttT11AY.100.00053
ORF1ab/nsp5A-B66F66FttCttT11AY.1010.00049
ORF1ab/nsp5A-B66F66FttCttT11AY.1070.000466
ORF1ab/nsp5A-B66F66FttCttT11AY.1080.001103
ORF1ab/nsp5A-B66F66FttCttT11AY.1100.000113
ORF1ab/nsp5A-B66F66FttCttT11AY.120.10.000321
ORF1ab/nsp5A-B66F66FttCttT11AY.150.002222
ORF1ab/nsp5A-B66F66FttCttT11AY.16.10.00047
ORF1ab/nsp5A-B66F66FttCttT11AY.29.10.000221
ORF1ab/nsp5A-B66F66FttCttT11AY.300.000396
ORF1ab/nsp5A-B66F66FttCttT11AY.320.000532
ORF1ab/nsp5A-B66F66FttCttT11AY.340.000097
ORF1ab/nsp5A-B66F66FttCttT11AY.400.000964
ORF1ab/nsp5A-B66F66FttCttT11AY.520.000814
ORF1ab/nsp5A-B66F66FttCttT11AY.590.00053
ORF1ab/nsp5A-B66F66FttCttT11AY.620.000436
ORF1ab/nsp5A-B66F66FttCttT11AY.630.000387
ORF1ab/nsp5A-B66F66FttCttT11AY.770.001127
ORF1ab/nsp5A-B66F66FttCttT11AY.790.001211
ORF1ab/nsp5A-B66F66FttCttT11AY.850.000427
ORF1ab/nsp5A-B66F66FttCttT11AY.870.000833
ORF1ab/nsp5A-B66F66FttCttT11AY.930.000273
ORF1ab/nsp5A-B66F66FttCttT11AY.950.000761
ORF1ab/nsp5A-B66F66FttCttT11AZ.20.000821
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.1210.002427
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.1590.004673
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.1600.02381
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.1760.000439
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.1980.001468
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.2070.001182
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.2200.001859
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.2610.008621
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.2980.000862
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.3260.001761
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.3660.015873
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.3970.002252
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.4020.011111
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.4130.006897
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.4200.001006
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.4290.004608
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.4490.022727
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.500.000679
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.5230.001563
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.5250.005464
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.750.010638
ORF1ab/nsp5A-B66F66FttCttT11B.1.1.980.018519
ORF1ab/nsp5A-B66F66FttCttT11B.1.1280.000635
ORF1ab/nsp5A-B66F66FttCttT11B.1.1470.000756
ORF1ab/nsp5A-B66F66FttCttT11B.1.177.170.000821
ORF1ab/nsp5A-B66F66FttCttT11B.1.177.330.001645
ORF1ab/nsp5A-B66F66FttCttT11B.1.177.450.000381
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