CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = F140F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B140F140FF3403FsynttCttT15051505110472-10474

Details of the mutation F140F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B140F140FttCttT15051505All0.000288
ORF1ab/nsp5A-B140F140FttCttT585585B.1.4040.761719
ORF1ab/nsp5A-B140F140FttCttT148148AY.390.003657
ORF1ab/nsp5A-B140F140FttCttT119119B.1.36.170.058794
ORF1ab/nsp5A-B140F140FttCttT9898B.1.1.70.000088
ORF1ab/nsp5A-B140F140FttCttT6262AY.250.000373
ORF1ab/nsp5A-B140F140FttCttT5454B.10.000495
ORF1ab/nsp5A-B140F140FttCttT5050AY.260.001416
ORF1ab/nsp5A-B140F140FttCttT5050B.1.1.3680.154321
ORF1ab/nsp5A-B140F140FttCttT3838B.1.3510.00113
ORF1ab/nsp5A-B140F140FttCttT3131B.1.20.000273
ORF1ab/nsp5A-B140F140FttCttT2424AY.440.000146
ORF1ab/nsp5A-B140F140FttCttT2020P.10.000315
ORF1ab/nsp5A-B140F140FttCttT1818B.1.617.20.000068
ORF1ab/nsp5A-B140F140FttCttT1717AY.40.000026
ORF1ab/nsp5A-B140F140FttCttT1414AY.290.000221
ORF1ab/nsp5A-B140F140FttCttT1313AY.1020.000345
ORF1ab/nsp5A-B140F140FttCttT1111AY.850.004699
ORF1ab/nsp5A-B140F140FttCttT1111B.1.1770.000145
ORF1ab/nsp5A-B140F140FttCttT88AY.1200.000297
ORF1ab/nsp5A-B140F140FttCttT88AY.30.00008
ORF1ab/nsp5A-B140F140FttCttT77AY.1030.000043
ORF1ab/nsp5A-B140F140FttCttT77B.1.5960.00061
ORF1ab/nsp5A-B140F140FttCttT66AY.430.000027
ORF1ab/nsp5A-B140F140FttCttT66B.1.360.000875
ORF1ab/nsp5A-B140F140FttCttT55B.1.10.000091
ORF1ab/nsp5A-B140F140FttCttT55B.1.4290.000118
ORF1ab/nsp5A-B140F140FttCttT44AY.4.20.000087
ORF1ab/nsp5A-B140F140FttCttT44B.1.1600.000125
ORF1ab/nsp5A-B140F140FttCttT44P.1.140.000191
ORF1ab/nsp5A-B140F140FttCttT33B0.000383
ORF1ab/nsp5A-B140F140FttCttT33B.1.1.3610.136364
ORF1ab/nsp5A-B140F140FttCttT33B.1.1.390.001529
ORF1ab/nsp5A-B140F140FttCttT33B.1.177.530.007177
ORF1ab/nsp5A-B140F140FttCttT33B.1.2340.000396
ORF1ab/nsp5A-B140F140FttCttT33B.1.2410.002435
ORF1ab/nsp5A-B140F140FttCttT22AY.1060.00067
ORF1ab/nsp5A-B140F140FttCttT22AY.1170.000169
ORF1ab/nsp5A-B140F140FttCttT22AY.1190.000071
ORF1ab/nsp5A-B140F140FttCttT22AY.3.10.000171
ORF1ab/nsp5A-B140F140FttCttT22AY.580.001815
ORF1ab/nsp5A-B140F140FttCttT22AY.60.000082
ORF1ab/nsp5A-B140F140FttCttT22AY.620.000871
ORF1ab/nsp5A-B140F140FttCttT22B.1.1460.008475
ORF1ab/nsp5A-B140F140FttCttT22B.1.3240.00321
ORF1ab/nsp5A-B140F140FttCttT22B.1.4270.000101
ORF1ab/nsp5A-B140F140FttCttT22B.1.466.20.000782
ORF1ab/nsp5A-B140F140FttCttT22B.1.5610.000794
ORF1ab/nsp5A-B140F140FttCttT11A.23.10.000704
ORF1ab/nsp5A-B140F140FttCttT11AY.140.000088
ORF1ab/nsp5A-B140F140FttCttT11AY.200.000039
ORF1ab/nsp5A-B140F140FttCttT11AY.39.10.00004
ORF1ab/nsp5A-B140F140FttCttT11AY.470.000031
ORF1ab/nsp5A-B140F140FttCttT11AY.510.000909
ORF1ab/nsp5A-B140F140FttCttT11AY.610.000105
ORF1ab/nsp5A-B140F140FttCttT11AY.630.000387
ORF1ab/nsp5A-B140F140FttCttT11AY.9.20.000037
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.130.035714
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.2140.000055
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.2290.005747
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.250.000569
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.2540.011236
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.3480.000796
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.4020.011111
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.5180.006329
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.5190.00004
ORF1ab/nsp5A-B140F140FttCttT11B.1.1.580.005376
ORF1ab/nsp5A-B140F140FttCttT11B.1.177.100.000878
ORF1ab/nsp5A-B140F140FttCttT11B.1.177.810.000189
ORF1ab/nsp5A-B140F140FttCttT11B.1.177.90.001332
ORF1ab/nsp5A-B140F140FttCttT11B.1.2430.00007
ORF1ab/nsp5A-B140F140FttCttT11B.1.2580.000067
ORF1ab/nsp5A-B140F140FttCttT11B.1.36.20.010753
ORF1ab/nsp5A-B140F140FttCttT11B.1.36.360.000602
ORF1ab/nsp5A-B140F140FttCttT11B.1.3960.000706
ORF1ab/nsp5A-B140F140FttCttT11B.1.5250.000113
ORF1ab/nsp5A-B140F140FttCttT11B.1.5260.000024
ORF1ab/nsp5A-B140F140FttCttT11B.1.5670.003333
ORF1ab/nsp5A-B140F140FttCttT11B.1.5820.000491
ORF1ab/nsp5A-B140F140FttCttT11B.1.6200.000946
ORF1ab/nsp5A-B140F140FttCttT11B.1.810.021277
ORF1ab/nsp5A-B140F140FttCttT11C.60.037037
ORF1ab/nsp5A-B140F140FttCttT11P.20.000187
ORF1ab/nsp5A-B140F140FttCttT11Q.80.000165