CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = D34Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B34D34YD3297YnonsynGacTac22210.95454510154-10156
ORF1ab/nsp5A-B34D34YD3297YnonsynGaCTaT2210.045454510154-10156

Details of the mutation D34Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B34D34YGacTac2122All0.000004
ORF1ab/nsp5A-B34D34YGaCTaT122All0
ORF1ab/nsp5A-B34D34YGacTac33B.10.000027
ORF1ab/nsp5A-B34D34YGacTac22AY.40.000003
ORF1ab/nsp5A-B34D34YGacTac22B.1.1.70.000002
ORF1ab/nsp5A-B34D34YGaCTaT12D.20.000075
ORF1ab/nsp5A-B34D34YGacTac12D.20.000075
ORF1ab/nsp5A-B34D34YGacTac11A.2.20.001689
ORF1ab/nsp5A-B34D34YGacTac11AY.320.000532
ORF1ab/nsp5A-B34D34YGacTac11AY.430.000004
ORF1ab/nsp5A-B34D34YGacTac11B0.000128
ORF1ab/nsp5A-B34D34YGacTac11B.1.1.1940.00495
ORF1ab/nsp5A-B34D34YGacTac11B.1.1.2160.00089
ORF1ab/nsp5A-B34D34YGacTac11B.1.1770.000013
ORF1ab/nsp5A-B34D34YGacTac11B.1.177.860.000183
ORF1ab/nsp5A-B34D34YGacTac11B.1.2100.002132
ORF1ab/nsp5A-B34D34YGacTac11B.1.2430.00007
ORF1ab/nsp5A-B34D34YGacTac11B.1.2580.000067
ORF1ab/nsp5A-B34D34YGacTac11B.1.36.100.004785
ORF1ab/nsp5A-B34D34YGacTac11B.6.60.000889