CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 245 | D245D | D3508D | syn | gaC | gaT | 8118 | 8118 | 1 | 10787-10789 |
Details of the mutation D245D within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8118 | 8118 | All | 0.001553 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1988 | 1988 | B.1.1.7 | 0.00178 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1809 | 1809 | AY.4 | 0.002816 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 977 | 977 | B.1.375 | 0.80082 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 327 | 327 | B.1.2 | 0.002879 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 211 | 211 | AE.8 | 0.103178 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 146 | 146 | B.1.160.11 | 0.834286 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 146 | 146 | B.1.617.2 | 0.00055 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 142 | 142 | B.1.1.269 | 0.192152 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 113 | 113 | AY.95 | 0.085997 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 111 | 111 | B.1.526 | 0.002609 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 104 | 104 | B.1 | 0.000953 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 103 | 103 | AY.103 | 0.00064 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 92 | 92 | B.52 | 0.929293 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 90 | 90 | B.1.1.301 | 0.106132 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 87 | 87 | B.1.1 | 0.001578 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 84 | 84 | AY.26 | 0.002378 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 83 | 83 | AY.43 | 0.000368 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 69 | 69 | AY.29 | 0.001088 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 65 | 65 | B.1.1.519 | 0.002581 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 56 | 56 | B.1.36 | 0.00817 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 54 | 54 | AY.44 | 0.000329 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 53 | 53 | AY.3 | 0.000527 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 49 | 49 | B.1.429 | 0.001153 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 48 | 48 | B.1.1.284 | 0.005155 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 48 | 48 | P.1 | 0.000756 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 42 | 42 | AY.25 | 0.000253 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 41 | 41 | B.1.177 | 0.00054 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 35 | 35 | B.1.326 | 0.265152 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 32 | 32 | B.1.1.294 | 0.040506 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 28 | 28 | AY.102 | 0.000742 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 28 | 28 | B.1.1.333 | 0.03014 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 25 | 25 | AY.100 | 0.00115 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 24 | 24 | B.1.160 | 0.000749 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 22 | 22 | Q.8 | 0.003628 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 20 | 20 | AY.39 | 0.000494 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 20 | 20 | AY.6 | 0.000823 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 19 | 19 | AY.121 | 0.002571 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 18 | 18 | AY.5.3 | 0.006073 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 16 | 16 | AY.118 | 0.001002 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 16 | 16 | B.1.177.56 | 0.010681 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 16 | 16 | C.35 | 0.012384 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 16 | 16 | Q.3 | 0.002321 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 14 | 14 | AY.45 | 0.001704 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 14 | 14 | B.1.177.81 | 0.002651 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 14 | 14 | B.1.258 | 0.000932 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 13 | 13 | AY.5 | 0.000268 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 13 | 13 | B.1.128 | 0.008259 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 12 | 12 | B.1.426 | 0.012109 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 11 | 11 | AY.20 | 0.000428 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | AE.1 | 0.113636 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | AY.23.1 | 0.004174 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | AY.59 | 0.005297 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | B.1.1.25 | 0.005685 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | B.1.1.63 | 0.003858 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | B.1.351 | 0.000297 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 10 | 10 | B.1.596 | 0.000871 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 9 | 9 | AY.99 | 0.009444 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | AY.4.2 | 0.000174 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | AY.99.2 | 0.000737 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | B | 0.001022 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | B.1.1.322 | 0.070175 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | B.1.258.21 | 0.062016 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | B.1.36.29 | 0.004139 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | B.1.427 | 0.000404 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 8 | 8 | P.2 | 0.001493 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 7 | 7 | AY.120 | 0.00026 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 7 | 7 | B.1.1.28 | 0.002179 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 7 | 7 | B.1.637 | 0.000512 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | A.2.5 | 0.002994 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | AY.23 | 0.000418 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.1.170 | 0.007481 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.1.428 | 0.056604 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.177.41 | 0.015 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.234 | 0.000792 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.570 | 0.017647 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.577 | 0.004124 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | AY.14 | 0.00044 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | AY.74 | 0.000578 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | AY.75 | 0.00028 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | C.23 | 0.02907 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 5 | 5 | P.1.14 | 0.000239 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.1 | 0.001583 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.120.1 | 0.001284 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.27 | 0.000259 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.36 | 0.000593 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.75.1 | 0.000721 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | AY.9.2 | 0.000147 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.1.317 | 0.001647 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.177.60 | 0.000874 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.177.7 | 0.000659 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.177.73 | 0.002265 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.177.87 | 0.002911 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | B.1.367 | 0.00317 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | C.38 | 0.032258 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | A.2.5.2 | 0.004717 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | A.21 | 0.00831 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | AY.116.1 | 0.000934 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | AY.13 | 0.000483 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | AY.35 | 0.000699 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.1.391 | 0.025641 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.177.40 | 0.015464 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.177.46 | 0.002755 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.36.18 | 0.001261 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.565 | 0.002431 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.587 | 0.005693 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | B.1.627 | 0.006061 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | C.26 | 0.022059 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | A.23.1 | 0.001408 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.109 | 0.001479 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.110 | 0.000225 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.34.1 | 0.00102 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.51 | 0.001818 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.1.1 | 0.000653 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.1.198 | 0.002937 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.1.411 | 0.029412 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.146 | 0.008475 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.177.15 | 0.001262 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.243 | 0.000139 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.346 | 0.002621 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.400 | 0.000858 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | B.1.638 | 0.105263 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 2 | 2 | S.1 | 0.009901 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AP.1 | 0.001502 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AS.2 | 0.015625 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AT.1 | 0.005128 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.83 | 0.001724 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.86 | 0.00083 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.135 | 0.004695 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.153 | 0.001095 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.426 | 0.035714 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.458 | 0.041667 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.53 | 0.013699 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.1.62 | 0.027027 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.33 | 0.001645 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.50 | 0.004695 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.279 | 0.000514 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.324 | 0.001605 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.370 | 0.008 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.433 | 0.003195 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.452 | 0.013699 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.462 | 0.007246 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.466.1 | 0.007194 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.473 | 0.019231 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | C.3 | 0.007634 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp5A-B | 245 | D245D | gaC | gaT | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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