CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = D229L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B229D229LD3492LnonsynGACCTA720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGAcCTc720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGACTTA720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGACCTT710.14285710739-10741

Details of the mutation D229L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B229D229LGACCTA27All0
ORF1ab/nsp5A-B229D229LGAcCTc27All0
ORF1ab/nsp5A-B229D229LGACTTA27All0
ORF1ab/nsp5A-B229D229LGACCTT17All0
ORF1ab/nsp5A-B229D229LGACTTA25B.1.10.000036
ORF1ab/nsp5A-B229D229LGAcCTc15B.1.10.000018
ORF1ab/nsp5A-B229D229LGACCTA15B.1.10.000018
ORF1ab/nsp5A-B229D229LGACCTT15B.1.10.000018
ORF1ab/nsp5A-B229D229LGACCTA12B.10.000009
ORF1ab/nsp5A-B229D229LGAcCTc12B.10.000009