CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = A7T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B7A7TA3270TnonsynGcaAca732732110073-10075

Details of the mutation A7T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B7A7TGcaAca732732All0.00014
ORF1ab/nsp5A-B7A7TGcaAca165165AY.440.001004
ORF1ab/nsp5A-B7A7TGcaAca131131B.1.6320.879195
ORF1ab/nsp5A-B7A7TGcaAca115115AY.250.000692
ORF1ab/nsp5A-B7A7TGcaAca7575B.1.1.70.000067
ORF1ab/nsp5A-B7A7TGcaAca4444B.1.4270.002222
ORF1ab/nsp5A-B7A7TGcaAca3030AY.40.000047
ORF1ab/nsp5A-B7A7TGcaAca2222B.1.20.000194
ORF1ab/nsp5A-B7A7TGcaAca1313B.1.617.20.000049
ORF1ab/nsp5A-B7A7TGcaAca99B.10.000082
ORF1ab/nsp5A-B7A7TGcaAca88B.1.1.5190.000318
ORF1ab/nsp5A-B7A7TGcaAca77AY.1030.000043
ORF1ab/nsp5A-B7A7TGcaAca66AY.4.20.00013
ORF1ab/nsp5A-B7A7TGcaAca55AY.390.000124
ORF1ab/nsp5A-B7A7TGcaAca55AY.430.000022
ORF1ab/nsp5A-B7A7TGcaAca44AY.1020.000106
ORF1ab/nsp5A-B7A7TGcaAca44AY.1180.000251
ORF1ab/nsp5A-B7A7TGcaAca44B0.000511
ORF1ab/nsp5A-B7A7TGcaAca44P.10.000063
ORF1ab/nsp5A-B7A7TGcaAca33AY.1060.001005
ORF1ab/nsp5A-B7A7TGcaAca33AY.1080.003308
ORF1ab/nsp5A-B7A7TGcaAca33B.1.177.90.003995
ORF1ab/nsp5A-B7A7TGcaAca33B.1.4290.000071
ORF1ab/nsp5A-B7A7TGcaAca33B.1.5960.000261
ORF1ab/nsp5A-B7A7TGcaAca33B.1.6270.006061
ORF1ab/nsp5A-B7A7TGcaAca33B.1.6360.020134
ORF1ab/nsp5A-B7A7TGcaAca33P.20.00056
ORF1ab/nsp5A-B7A7TGcaAca22AY.1200.000074
ORF1ab/nsp5A-B7A7TGcaAca22AY.140.000176
ORF1ab/nsp5A-B7A7TGcaAca22AY.30.00002
ORF1ab/nsp5A-B7A7TGcaAca22AY.700.000417
ORF1ab/nsp5A-B7A7TGcaAca22B.1.10.000036
ORF1ab/nsp5A-B7A7TGcaAca22B.1.1.2690.002706
ORF1ab/nsp5A-B7A7TGcaAca22B.1.3360.004878
ORF1ab/nsp5A-B7A7TGcaAca22B.1.3510.000059
ORF1ab/nsp5A-B7A7TGcaAca22B.1.360.000292
ORF1ab/nsp5A-B7A7TGcaAca22B.1.466.20.000782
ORF1ab/nsp5A-B7A7TGcaAca22B.1.5260.000047
ORF1ab/nsp5A-B7A7TGcaAca22B.1.6230.001073
ORF1ab/nsp5A-B7A7TGcaAca11A.20.000662
ORF1ab/nsp5A-B7A7TGcaAca11AY.1000.000046
ORF1ab/nsp5A-B7A7TGcaAca11AY.1010.00049
ORF1ab/nsp5A-B7A7TGcaAca11AY.1140.000231
ORF1ab/nsp5A-B7A7TGcaAca11AY.200.000039
ORF1ab/nsp5A-B7A7TGcaAca11AY.290.000016
ORF1ab/nsp5A-B7A7TGcaAca11AY.320.000532
ORF1ab/nsp5A-B7A7TGcaAca11AY.39.10.00004
ORF1ab/nsp5A-B7A7TGcaAca11AY.4.2.10.000149
ORF1ab/nsp5A-B7A7TGcaAca11AY.450.000122
ORF1ab/nsp5A-B7A7TGcaAca11AY.460.000104
ORF1ab/nsp5A-B7A7TGcaAca11AY.510.000909
ORF1ab/nsp5A-B7A7TGcaAca11AY.540.000095
ORF1ab/nsp5A-B7A7TGcaAca11AY.550.000917
ORF1ab/nsp5A-B7A7TGcaAca11AY.70.000196
ORF1ab/nsp5A-B7A7TGcaAca11AY.750.000056
ORF1ab/nsp5A-B7A7TGcaAca11AY.75.10.00018
ORF1ab/nsp5A-B7A7TGcaAca11AY.780.001541
ORF1ab/nsp5A-B7A7TGcaAca11AY.99.20.000092
ORF1ab/nsp5A-B7A7TGcaAca11B.1.1.370.000193
ORF1ab/nsp5A-B7A7TGcaAca11B.1.1.4160.000905
ORF1ab/nsp5A-B7A7TGcaAca11B.1.1.80.003584
ORF1ab/nsp5A-B7A7TGcaAca11B.1.1600.000031
ORF1ab/nsp5A-B7A7TGcaAca11B.1.160.160.000929
ORF1ab/nsp5A-B7A7TGcaAca11B.1.1770.000013
ORF1ab/nsp5A-B7A7TGcaAca11B.1.177.430.001477
ORF1ab/nsp5A-B7A7TGcaAca11B.1.220.001318
ORF1ab/nsp5A-B7A7TGcaAca11B.1.36.290.000517
ORF1ab/nsp5A-B7A7TGcaAca11B.1.617.10.000129
ORF1ab/nsp5A-B7A7TGcaAca11B.1.6210.000089
ORF1ab/nsp5A-B7A7TGcaAca11B.1.6310.003367
ORF1ab/nsp5A-B7A7TGcaAca11B.1.6370.000073
ORF1ab/nsp5A-B7A7TGcaAca11Q.80.000165