CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : Mut = A285T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B285A285TA3548TnonsynGctAct1241220.98387110907-10909
ORF1ab/nsp5A-B285A285TA3548TnonsynGcTAcG12410.0080645210907-10909
ORF1ab/nsp5A-B285A285TA3548TnonsynGcTAcA12410.0080645210907-10909

Details of the mutation A285T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B285A285TGctAct122124All0.000023
ORF1ab/nsp5A-B285A285TGcTAcA1124All0
ORF1ab/nsp5A-B285A285TGcTAcG1124All0
ORF1ab/nsp5A-B285A285TGctAct5454P.10.000851
ORF1ab/nsp5A-B285A285TGctAct2424B.1.1.70.000021
ORF1ab/nsp5A-B285A285TGctAct1212B.1.1.2220.002448
ORF1ab/nsp5A-B285A285TGctAct55AY.40.000008
ORF1ab/nsp5A-B285A285TGctAct55B.1.1.1860.017182
ORF1ab/nsp5A-B285A285TGctAct340.166667
ORF1ab/nsp5A-B285A285TGcTAcA140.055556
ORF1ab/nsp5A-B285A285TGctAct44B.1.617.20.000015
ORF1ab/nsp5A-B285A285TGctAct33B.10.000027
ORF1ab/nsp5A-B285A285TGctAct22AY.1030.000012
ORF1ab/nsp5A-B285A285TGctAct22AY.430.000009
ORF1ab/nsp5A-B285A285TGctAct11AY.230.00007
ORF1ab/nsp5A-B285A285TGctAct11AY.350.000233
ORF1ab/nsp5A-B285A285TGctAct11AY.390.000025
ORF1ab/nsp5A-B285A285TGctAct11AY.920.000287
ORF1ab/nsp5A-B285A285TGcTAcG11B.1.10.000018
ORF1ab/nsp5A-B285A285TGctAct11B.1.1.250.000569
ORF1ab/nsp5A-B285A285TGctAct11B.1.1.5250.005464
ORF1ab/nsp5A-B285A285TGctAct11B.1.20.000009
ORF1ab/nsp5A-B285A285TGctAct11P.1.120.000484