CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 129 | A129V | A3392V | nonsyn | gCt | gTt | 5730 | 5713 | 0.997033 | 10439-10441 |
ORF1ab/nsp5A-B | 129 | A129V | A3392V | nonsyn | gCT | gTG | 5730 | 10 | 0.0017452 | 10439-10441 |
ORF1ab/nsp5A-B | 129 | A129V | A3392V | nonsyn | gCT | gTC | 5730 | 4 | 0.00069808 | 10439-10441 |
ORF1ab/nsp5A-B | 129 | A129V | A3392V | nonsyn | gCT | gTA | 5730 | 3 | 0.00052356 | 10439-10441 |
Details of the mutation A129V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5713 | 5730 | All | 0.001093 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTG | 10 | 5730 | All | 0.000002 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTC | 4 | 5730 | All | 0.000001 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTA | 3 | 5730 | All | 0.000001 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2560 | 2560 | AY.4 | 0.003984 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 373 | 373 | B.1.1.7 | 0.000334 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 304 | 304 | AY.25 | 0.001829 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 299 | 299 | B.1.617.2 | 0.001126 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 248 | 248 | AY.44 | 0.00151 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 194 | 194 | AY.43 | 0.00086 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 184 | 184 | B.1.177.80 | 0.351816 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 136 | 138 | B.1.2 | 0.001198 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTG | 2 | 138 | B.1.2 | 0.000018 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 124 | 124 | AY.103 | 0.00077 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 74 | 74 | B.1.1.55 | 0.961039 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 69 | 69 | AY.102 | 0.001829 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 52 | 52 | AY.119 | 0.001836 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 40 | 51 | B.1 | 0.000366 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTG | 7 | 51 | B.1 | 0.000064 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTA | 2 | 51 | B.1 | 0.000018 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTC | 2 | 51 | B.1 | 0.000018 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 46 | 46 | B.1.177 | 0.000606 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 44 | 44 | B.1.177.60 | 0.009611 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 40 | 40 | B.1.1 | 0.000726 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 36 | 36 | AY.39 | 0.00089 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 26 | 26 | AY.64 | 0.015476 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 25 | 25 | AY.100 | 0.00115 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 24 | 24 | AY.4.2 | 0.000521 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 20 | 20 | B.1.1.519 | 0.000794 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 20 | 20 | P.1 | 0.000315 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 19 | 19 | AY.33 | 0.001269 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 19 | 19 | AY.98 | 0.001501 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 18 | 18 | AY.120 | 0.000669 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 18 | 18 | B.1.177.81 | 0.003408 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 17 | 17 | B.1.177.4 | 0.003588 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 16 | 16 | AY.26 | 0.000453 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 16 | 16 | B.1.1.37 | 0.003086 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 16 | 16 | B.1.429 | 0.000376 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 15 | 15 | AY.47 | 0.000467 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 14 | 14 | B.1.617.1 | 0.001806 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 13 | 13 | AY.41 | 0.003821 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 13 | 13 | AY.42 | 0.000523 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 13 | 13 | AY.98.1 | 0.00063 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 13 | 13 | B.1.1.284 | 0.001396 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 13 | 13 | B.1.351 | 0.000386 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 12 | 12 | AY.5 | 0.000248 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 10 | 12 | B.1.160 | 0.000312 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTG | 1 | 12 | B.1.160 | 0.000031 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTC | 1 | 12 | B.1.160 | 0.000031 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 11 | 11 | B.1.1.304 | 0.030899 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 11 | 11 | B.1.221 | 0.000781 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 10 | 10 | B.1.1.89 | 0.060606 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 10 | B.1.258 | 0.000532 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTA | 1 | 10 | B.1.258 | 0.000067 |
ORF1ab/nsp5A-B | 129 | A129V | gCT | gTC | 1 | 10 | B.1.258 | 0.000067 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 10 | 10 | B.1.526 | 0.000235 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 10 | 10 | C.36.3 | 0.005672 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 9 | 9 | AY.20 | 0.00035 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 9 | 9 | AY.4.2.1 | 0.001341 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 8 | AY.46.6 | 0.000578 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 8 | AY.61 | 0.000838 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 8 | AY.62 | 0.003486 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 8 | AY.85 | 0.003417 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 8 | 8 | B.1.575 | 0.002427 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 7 | 7 | B.1.240 | 0.001509 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 7 | 7 | B.1.637 | 0.000512 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 6 | 6 | A.2.5 | 0.002994 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 6 | 6 | B.1.577 | 0.004124 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.35 | 0.001165 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.39.1 | 0.000198 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.6 | 0.000206 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.9.1 | 0.000419 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | AY.91 | 0.003652 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | B.1.1.214 | 0.000277 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | B.1.177.21 | 0.000382 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | D.2 | 0.000375 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | P.1.12 | 0.00242 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 5 | 5 | R.1 | 0.00045 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.118 | 0.000251 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.54 | 0.000381 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.69 | 0.000747 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.84 | 0.00175 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | B.1.1.526 | 0.014184 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | B.1.306 | 0.022857 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | B.1.351.2 | 0.00121 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 4 | 4 | Q.1 | 0.000505 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | AY.108 | 0.003308 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | AY.30 | 0.001187 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | AY.95 | 0.002283 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.1.297 | 0.006711 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.1.432 | 0.003797 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.349 | 0.002144 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.427 | 0.000151 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.428.1 | 0.103448 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.595 | 0.000783 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.111 | 0.000366 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.113 | 0.000285 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.88 | 0.001768 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.90 | 0.001369 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B | 0.000256 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.1.231 | 0.006192 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.177.42 | 0.001789 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.232 | 0.001075 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.36.16 | 0.002849 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.36.26 | 0.005714 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | B.1.416 | 0.002538 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | Q.4 | 0.00091 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.17 | 0.008197 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.60 | 0.000938 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | AZ.3 | 0.00152 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.434 | 0.000349 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.48 | 0.002874 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.128 | 0.000635 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.14 | 0.017544 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.160.33 | 0.004425 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.23 | 0.006061 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.321 | 0.034483 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.36.2 | 0.010753 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.36.27 | 0.000763 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.549 | 0.007194 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.597 | 0.00463 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | C.36.3.1 | 0.002717 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | C.8 | 0.004464 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp5A-B | 129 | A129V | gCt | gTt | 1 | 1 | Q.2 | 0.000613 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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