CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 89

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B89L89FL3352FnonsynCttTtt1364771364710.99995610319-10321
ORF1ab/nsp5A-B89L89FL3352FnonsynCtTTtC13647760.000043963510319-10321
ORF1ab/nsp5A-B89L89LL3352LsynctTctC92810.88043510319-10321
ORF1ab/nsp5A-B89L89LL3352LsynctTctG9260.065217410319-10321
ORF1ab/nsp5A-B89L89LL3352LsynctTctA9250.054347810319-10321
ORF1ab/nsp5A-B89L89delL3352deldelCTT---2020110319-10321
ORF1ab/nsp5A-B89L89IL3352InonsynCttAtt12110.91666710319-10321
ORF1ab/nsp5A-B89L89IL3352InonsynCtTAtA1210.083333310319-10321
ORF1ab/nsp5A-B89L89PL3352PnonsyncTtcCt870.87510319-10321
ORF1ab/nsp5A-B89L89PL3352PnonsyncTTcCC810.12510319-10321
ORF1ab/nsp5A-B89L89RL3352RnonsyncTtcGt420.510319-10321
ORF1ab/nsp5A-B89L89RL3352RnonsyncTTcGA420.510319-10321
ORF1ab/nsp5A-B89L89del1L3352del1delcTtc-t320.66666710319-10321
ORF1ab/nsp5A-B89L89del1L3352del1delcTTc-C310.33333310319-10321
ORF1ab/nsp5A-B89L89CL3352CnonsynCTtTGt22110319-10321
ORF1ab/nsp5A-B89L89SL3352SnonsynCTTTCC210.510319-10321
ORF1ab/nsp5A-B89L89SL3352SnonsynCTtTCt210.510319-10321
ORF1ab/nsp5A-B89L89AL3352AnonsynCTtGCt11110319-10321
ORF1ab/nsp5A-B89L89ML3352MnonsynCtTAtG11110319-10321
ORF1ab/nsp5A-B89L89VL3352VnonsynCttGtt11110319-10321

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B89L89FCttTtt136471136477All0.026102
ORF1ab/nsp5A-B89L89FCtTTtC6136477All0.000001
ORF1ab/nsp5A-B89L89FCttTtt112311112315B.1.20.98894
ORF1ab/nsp5A-B89L89FCtTTtC4112315B.1.20.000035
ORF1ab/nsp5A-B89L89FCttTtt1071910719B.1.5960.934036
ORF1ab/nsp5A-B89L89FCttTtt36423642B.1.5950.950418
ORF1ab/nsp5A-B89L89FCttTtt31853185B.10.029173
ORF1ab/nsp5A-B89L89FCttTtt14451445B.1.5770.993127
ORF1ab/nsp5A-B89L89FCttTtt10991099B.1.5881
ORF1ab/nsp5A-B89L89FCttTtt529529B.1.1.70.000474
ORF1ab/nsp5A-B89L89FCttTtt527527B.1.5871
ORF1ab/nsp5A-B89L89FCttTtt298298B.1.5670.993333
ORF1ab/nsp5A-B89L89FCttTtt285285B.1.10.00517
ORF1ab/nsp5A-B89L89FCttTtt226226P.10.00356
ORF1ab/nsp5A-B89L89FCttTtt170170B.1.595.10.994152
ORF1ab/nsp5A-B89L89FCttTtt156156AY.40.000243
ORF1ab/nsp5A-B89L89FCttTtt137137B.1.595.41
ORF1ab/nsp5A-B89L89FCttTtt130130B.1.5890.984848
ORF1ab/nsp5A-B89L89FCttTtt112112AY.250.000674
ORF1ab/nsp5A-B89L89FCttTtt9494B.1.5911
ORF1ab/nsp5A-B89L89LctTctC8192All0.000015
ORF1ab/nsp5A-B89L89LctTctG692All0.000001
ORF1ab/nsp5A-B89L89LctTctA592All0.000001
ORF1ab/nsp5A-B89L89FCttTtt7071B.1.617.20.000264
ORF1ab/nsp5A-B89L89FCtTTtC171B.1.617.20.000004
ORF1ab/nsp5A-B89L89FCttTtt6666AY.470.002053
ORF1ab/nsp5A-B89L89FCttTtt5858B.1.4290.001365
ORF1ab/nsp5A-B89L89FCttTtt4949B.1.177.730.027746
ORF1ab/nsp5A-B89L89FCttTtt4545B.1.2340.005937
ORF1ab/nsp5A-B89L89FCttTtt4343B.1.1.5190.001708
ORF1ab/nsp5A-B89L89FCttTtt3838B.1.595.31
ORF1ab/nsp5A-B89L89FCttTtt3333AY.1030.000205
ORF1ab/nsp5A-B89L89FCttTtt3232B.1.2430.002227
ORF1ab/nsp5A-B89L89FCttTtt3232B.1.5800.130081
ORF1ab/nsp5A-B89L89FCttTtt2727AY.430.00012
ORF1ab/nsp5A-B89L89FCttTtt2626B.1.588.11
ORF1ab/nsp5A-B89L89FCttTtt2525AY.200.000972
ORF1ab/nsp5A-B89L89FCttTtt2525B.1.595.21
ORF1ab/nsp5A-B89L89FCttTtt2323AY.39.10.000911
ORF1ab/nsp5A-B89L89FCttTtt2222B.1.1.3350.285714
ORF1ab/nsp5A-B89L89FCttTtt2222B.1.3690.006275
ORF1ab/nsp5A-B89L89FCttTtt2222B.1.3960.015526
ORF1ab/nsp5A-B89L89delCTT---2020All0.000004
ORF1ab/nsp5A-B89L89FCttTtt2020B.1.1600.000624
ORF1ab/nsp5A-B89L89FCttTtt2020B.1.5740.043011
ORF1ab/nsp5A-B89L89FCttTtt2020P.1.170.003235
ORF1ab/nsp5A-B89L89FCttTtt1919B.1.5640.008092
ORF1ab/nsp5A-B89L89FCttTtt1818AY.440.00011
ORF1ab/nsp5A-B89L89FCttTtt1717B.1.5760.015413
ORF1ab/nsp5A-B89L89FCttTtt1616AY.30.000159
ORF1ab/nsp5A-B89L89FCttTtt1616B.1.1770.000211
ORF1ab/nsp5A-B89L89FCttTtt1414B.1.1110.016451
ORF1ab/nsp5A-B89L89FCttTtt1414B.1.2840.184211
ORF1ab/nsp5A-B89L89LctTctC1313AY.440.000079
ORF1ab/nsp5A-B89L89ICttAtt1112All0.000002
ORF1ab/nsp5A-B89L89ICtTAtA112All0
ORF1ab/nsp5A-B89L89FCttTtt1212AY.290.000189
ORF1ab/nsp5A-B89L89FCttTtt1212B.1.3110.003295
ORF1ab/nsp5A-B89L89FCttTtt1212B.1.5260.000282
ORF1ab/nsp5A-B89L89FCttTtt1111B.1.1.3480.008758
ORF1ab/nsp5A-B89L89FCttTtt1111B.1.2210.000781
ORF1ab/nsp5A-B89L89FCttTtt1010B0.001278
ORF1ab/nsp5A-B89L89FCttTtt1010B.1.2400.002156
ORF1ab/nsp5A-B89L89FCttTtt99AY.1020.000239
ORF1ab/nsp5A-B89L89LctTctC99B.1.617.20.000034
ORF1ab/nsp5A-B89L89PcTtcCt78All0.000001
ORF1ab/nsp5A-B89L89PcTTcCC18All0
ORF1ab/nsp5A-B89L89FCttTtt88B.1.177.210.000612
ORF1ab/nsp5A-B89L89FCttTtt88B.1.617.10.001032
ORF1ab/nsp5A-B89L89FCttTtt88B.1.6210.000708
ORF1ab/nsp5A-B89L89FCttTtt88R.10.00072
ORF1ab/nsp5A-B89L89FCttTtt77AY.390.000173
ORF1ab/nsp5A-B89L89FCttTtt77B.1.2060.00571
ORF1ab/nsp5A-B89L89FCttTtt77B.1.3490.005004
ORF1ab/nsp5A-B89L89FCttTtt77B.1.3670.005547
ORF1ab/nsp5A-B89L89FCttTtt77B.1.4000.003003
ORF1ab/nsp5A-B89L89LctTctC77B.1.5250.000792
ORF1ab/nsp5A-B89L89FCttTtt66AY.46.50.00119
ORF1ab/nsp5A-B89L89FCttTtt66B.1.1.4090.016997
ORF1ab/nsp5A-B89L89delCTT---66B.1.1.70.000005
ORF1ab/nsp5A-B89L89LctTctC56B.1.1.70.000004
ORF1ab/nsp5A-B89L89LctTctG16B.1.1.70.000001
ORF1ab/nsp5A-B89L89FCttTtt66B.1.2580.000399
ORF1ab/nsp5A-B89L89FCttTtt66B.1.3750.004918
ORF1ab/nsp5A-B89L89FCttTtt66B.1.5210.029851
ORF1ab/nsp5A-B89L89FCttTtt450.222222
ORF1ab/nsp5A-B89L89FCtTTtC150.055556
ORF1ab/nsp5A-B89L89FCttTtt55AY.330.000334
ORF1ab/nsp5A-B89L89LctTctC45AY.40.000006
ORF1ab/nsp5A-B89L89LctTctA15AY.40.000002
ORF1ab/nsp5A-B89L89FCttTtt55AY.930.001365
ORF1ab/nsp5A-B89L89FCttTtt55B.1.1.4320.006329
ORF1ab/nsp5A-B89L89FCttTtt55B.1.1.5070.043478
ORF1ab/nsp5A-B89L89FCttTtt55B.1.1390.003666
ORF1ab/nsp5A-B89L89FCttTtt55B.1.177.600.001092
ORF1ab/nsp5A-B89L89LctTctC55B.1.2580.000333
ORF1ab/nsp5A-B89L89FCttTtt55B.1.4270.000252
ORF1ab/nsp5A-B89L89FCttTtt55B.1.5170.002135
ORF1ab/nsp5A-B89L89FCttTtt55B.1.5750.001517
ORF1ab/nsp5A-B89L89FCttTtt55B.1.5900.022727
ORF1ab/nsp5A-B89L89FCttTtt55B.1.6060.03012
ORF1ab/nsp5A-B89L89FCttTtt55P.1.140.000239
ORF1ab/nsp5A-B89L89RcTtcGt240.111111
ORF1ab/nsp5A-B89L89RcTTcGA240.111111
ORF1ab/nsp5A-B89L89RcTtcGt24All0
ORF1ab/nsp5A-B89L89RcTTcGA24All0
ORF1ab/nsp5A-B89L89LctTctC44AY.140.000352
ORF1ab/nsp5A-B89L89LctTctG44AY.260.000113
ORF1ab/nsp5A-B89L89FCttTtt44AY.75.10.000721
ORF1ab/nsp5A-B89L89FCttTtt44B.1.1.3120.007648
ORF1ab/nsp5A-B89L89FCttTtt44B.1.1.500.002716
ORF1ab/nsp5A-B89L89FCttTtt44B.1.1570.01194
ORF1ab/nsp5A-B89L89FCttTtt44B.1.2100.008529
ORF1ab/nsp5A-B89L89FCttTtt44B.1.36.80.004
ORF1ab/nsp5A-B89L89ICttAtt44B.1.4290.000094
ORF1ab/nsp5A-B89L89FCttTtt44B.1.4380.026144
ORF1ab/nsp5A-B89L89FCttTtt44B.1.5240.005626
ORF1ab/nsp5A-B89L89FCttTtt44C.230.023256
ORF1ab/nsp5A-B89L89FCttTtt44C.370.000464
ORF1ab/nsp5A-B89L89FCttTtt44P.1.150.000929
ORF1ab/nsp5A-B89L89FCttTtt44P.20.000747
ORF1ab/nsp5A-B89L89LctTctA230.111111
ORF1ab/nsp5A-B89L89LctTctC130.055556
ORF1ab/nsp5A-B89L89del1cTtc-t23All0
ORF1ab/nsp5A-B89L89del1cTTc-C13All0
ORF1ab/nsp5A-B89L89FCttTtt33AY.1000.000138
ORF1ab/nsp5A-B89L89FCttTtt33AY.1190.000106
ORF1ab/nsp5A-B89L89LctTctC33AY.230.000209
ORF1ab/nsp5A-B89L89FCttTtt33AY.230.000209
ORF1ab/nsp5A-B89L89FCttTtt33AY.3.10.000256
ORF1ab/nsp5A-B89L89delCTT---33AY.40.000005
ORF1ab/nsp5A-B89L89FCttTtt33AY.4.20.000065
ORF1ab/nsp5A-B89L89FCttTtt33AY.46.10.00308
ORF1ab/nsp5A-B89L89FCttTtt33AY.480.001395
ORF1ab/nsp5A-B89L89FCttTtt33AY.50.000062
ORF1ab/nsp5A-B89L89FCttTtt33AY.9.20.00011
ORF1ab/nsp5A-B89L89LctTctC33B.10.000027
ORF1ab/nsp5A-B89L89FCttTtt33B.1.1.4870.01676
ORF1ab/nsp5A-B89L89FCttTtt33B.1.160.160.002788
ORF1ab/nsp5A-B89L89FCttTtt33B.1.177.70.000495
ORF1ab/nsp5A-B89L89FCttTtt33B.1.3240.004815
ORF1ab/nsp5A-B89L89FCttTtt33B.1.3360.007317
ORF1ab/nsp5A-B89L89FCttTtt33B.1.3510.000089
ORF1ab/nsp5A-B89L89FCttTtt33B.1.4130.012766
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5090.002597
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5650.002431
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5690.043478
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5710.029126
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5810.028302
ORF1ab/nsp5A-B89L89FCttTtt33B.1.5820.001472
ORF1ab/nsp5A-B89L89LctTctC33B.60.00273
ORF1ab/nsp5A-B89L89FCttTtt33C.36.30.001702
ORF1ab/nsp5A-B89L89FCttTtt33P.1.100.000808
ORF1ab/nsp5A-B89L89FCttTtt33P.1.120.001452
ORF1ab/nsp5A-B89L89FCttTtt33P.60.009434
ORF1ab/nsp5A-B89L89LctTctC33Q.30.000435
ORF1ab/nsp5A-B89L89FCttTtt33Q.40.001364
ORF1ab/nsp5A-B89L89CCTtTGt220.111111
ORF1ab/nsp5A-B89L89SCTTTCC120.055556
ORF1ab/nsp5A-B89L89SCTtTCt120.055556
ORF1ab/nsp5A-B89L89PcTtcCt120.055556
ORF1ab/nsp5A-B89L89PcTTcCC120.055556
ORF1ab/nsp5A-B89L89CCTtTGt22All0
ORF1ab/nsp5A-B89L89SCTtTCt12All0
ORF1ab/nsp5A-B89L89SCTTTCC12All0
ORF1ab/nsp5A-B89L89LctTctC22AY.1090.001479
ORF1ab/nsp5A-B89L89FCttTtt22AY.1160.000574
ORF1ab/nsp5A-B89L89LctTctC22AY.1190.000071
ORF1ab/nsp5A-B89L89FCttTtt22AY.260.000057
ORF1ab/nsp5A-B89L89FCttTtt22AY.840.000875
ORF1ab/nsp5A-B89L89FCttTtt22AY.99.20.000184
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.10.000653
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.1740.006757
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.2200.003717
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.2220.000408
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.2310.006192
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.2510.015873
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.280.000622
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.3010.002358
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.3060.000877
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1.3170.000823
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1280.001271
ORF1ab/nsp5A-B89L89delCTT---22B.1.1770.000026
ORF1ab/nsp5A-B89L89FCttTtt22B.1.1890.008584
ORF1ab/nsp5A-B89L89FCttTtt22B.1.2140.007326
ORF1ab/nsp5A-B89L89FCttTtt22B.1.2320.001075
ORF1ab/nsp5A-B89L89FCttTtt22B.1.2650.002541
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3050.004301
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3060.011429
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3250.013793
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3300.057143
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3370.011173
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3400.008584
ORF1ab/nsp5A-B89L89LctTctC22B.1.360.000292
ORF1ab/nsp5A-B89L89FCttTtt22B.1.360.000292
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3610.002577
ORF1ab/nsp5A-B89L89FCttTtt22B.1.3970.009709
ORF1ab/nsp5A-B89L89FCttTtt22B.1.4480.005249
ORF1ab/nsp5A-B89L89FCttTtt22B.1.5460.007407
ORF1ab/nsp5A-B89L89FCttTtt22B.1.5500.027397
ORF1ab/nsp5A-B89L89FCttTtt22B.1.5610.000794
ORF1ab/nsp5A-B89L89FCttTtt22B.1.5680.002222
ORF1ab/nsp5A-B89L89FCttTtt22B.1.780.017094
ORF1ab/nsp5A-B89L89FCttTtt22B.1.88.10.009615
ORF1ab/nsp5A-B89L89FCttTtt22B.4.10.037736
ORF1ab/nsp5A-B89L89FCttTtt22B.6.60.001778
ORF1ab/nsp5A-B89L89PcTtcCt22D.20.00015
ORF1ab/nsp5A-B89L89LctTctA22P.10.000032
ORF1ab/nsp5A-B89L89LctTctC22Q.10.000253
ORF1ab/nsp5A-B89L89FCttTtt22Q.10.000253
ORF1ab/nsp5A-B89L89FCttTtt22Q.80.00033
ORF1ab/nsp5A-B89L89FCttTtt11A0.000387
ORF1ab/nsp5A-B89L89FCttTtt11A.10.000282
ORF1ab/nsp5A-B89L89FCttTtt11A.2.50.000499
ORF1ab/nsp5A-B89L89FCttTtt11A.2.5.20.001572
ORF1ab/nsp5A-B89L89FCttTtt11A.30.002096
ORF1ab/nsp5A-B89L89VCttGtt11All0
ORF1ab/nsp5A-B89L89MCtTAtG11All0
ORF1ab/nsp5A-B89L89ACTtGCt11All0
ORF1ab/nsp5A-B89L89FCttTtt11AY.10.000396
ORF1ab/nsp5A-B89L89FCttTtt11AY.1010.00049
ORF1ab/nsp5A-B89L89LctTctC11AY.1020.000027
ORF1ab/nsp5A-B89L89LctTctC11AY.1030.000006
ORF1ab/nsp5A-B89L89ICttAtt11AY.1030.000006
ORF1ab/nsp5A-B89L89FCttTtt11AY.1140.000231
ORF1ab/nsp5A-B89L89FCttTtt11AY.1180.000063
ORF1ab/nsp5A-B89L89FCttTtt11AY.120.000316
ORF1ab/nsp5A-B89L89FCttTtt11AY.120.20.001285
ORF1ab/nsp5A-B89L89FCttTtt11AY.1210.000135
ORF1ab/nsp5A-B89L89FCttTtt11AY.20.000356
ORF1ab/nsp5A-B89L89LctTctC11AY.250.000006
ORF1ab/nsp5A-B89L89ICttAtt11AY.250.000006
ORF1ab/nsp5A-B89L89ICttAtt11AY.260.000028
ORF1ab/nsp5A-B89L89FCttTtt11AY.300.000396
ORF1ab/nsp5A-B89L89LctTctC11AY.330.000067
ORF1ab/nsp5A-B89L89FCttTtt11AY.380.000499
ORF1ab/nsp5A-B89L89FCttTtt11AY.4.30.000842
ORF1ab/nsp5A-B89L89delCTT---11AY.4.50.000107
ORF1ab/nsp5A-B89L89delCTT---11AY.430.000004
ORF1ab/nsp5A-B89L89LctTctC11AY.430.000004
ORF1ab/nsp5A-B89L89ACTtGCt11AY.440.000006
ORF1ab/nsp5A-B89L89PcTtcCt11AY.460.000104
ORF1ab/nsp5A-B89L89FCttTtt11AY.460.000104
ORF1ab/nsp5A-B89L89FCttTtt11AY.46.60.000072
ORF1ab/nsp5A-B89L89LctTctC11AY.540.000095
ORF1ab/nsp5A-B89L89FCttTtt11AY.60.000041
ORF1ab/nsp5A-B89L89FCttTtt11AY.610.000105
ORF1ab/nsp5A-B89L89ICttAtt11AY.610.000105
ORF1ab/nsp5A-B89L89FCttTtt11AY.630.000387
ORF1ab/nsp5A-B89L89del1cTTc-C11AY.670.000464
ORF1ab/nsp5A-B89L89delCTT---11AY.670.000464
ORF1ab/nsp5A-B89L89FCttTtt11AY.690.000187
ORF1ab/nsp5A-B89L89FCttTtt11AY.7.10.000113
ORF1ab/nsp5A-B89L89FCttTtt11AY.740.000116
ORF1ab/nsp5A-B89L89FCttTtt11AY.750.000056
ORF1ab/nsp5A-B89L89FCttTtt11AY.820.001357
ORF1ab/nsp5A-B89L89FCttTtt11AY.910.00073
ORF1ab/nsp5A-B89L89FCttTtt11AY.950.000761
ORF1ab/nsp5A-B89L89del1cTtc-t11AY.960.002075
ORF1ab/nsp5A-B89L89delCTT---11AY.99.10.001553
ORF1ab/nsp5A-B89L89PcTtcCt11B0.000128
ORF1ab/nsp5A-B89L89delCTT---11B.1.10.000018
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.1610.003534
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.1690.018182
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.1890.001513
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.1920.002309
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.1980.001468
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.2100.005714
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.2140.000055
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.2160.00089
ORF1ab/nsp5A-B89L89LctTctC11B.1.1.2220.000204
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.2300.009174
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.2770.000759
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1.3120.001912
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3180.000302
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.330.000421
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3340.016393
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3370.003597
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3500.04
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3620.005618
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.370.000193
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.3700.012658
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.390.00051
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.4020.011111
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.4340.000349
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.440.00241
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.5180.006329
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.5280.004808
ORF1ab/nsp5A-B89L89PcTtcCt11B.1.1.70.000001
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1.70.000001
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1.700.000341
ORF1ab/nsp5A-B89L89FCttTtt11B.1.110.30.000718
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1190.010526
ORF1ab/nsp5A-B89L89FCttTtt11B.1.1260.001276
ORF1ab/nsp5A-B89L89FCttTtt11B.1.160.140.002119
ORF1ab/nsp5A-B89L89ICttAtt11B.1.1770.000013
ORF1ab/nsp5A-B89L89FCttTtt11B.1.177.160.000664
ORF1ab/nsp5A-B89L89FCttTtt11B.1.177.170.000821
ORF1ab/nsp5A-B89L89delCTT---11B.1.177.180.00116
ORF1ab/nsp5A-B89L89delCTT---11B.1.177.40.000211
ORF1ab/nsp5A-B89L89FCttTtt11B.1.177.40.000211
ORF1ab/nsp5A-B89L89FCttTtt11B.1.177.560.000668
ORF1ab/nsp5A-B89L89FCttTtt11B.1.177.800.001912
ORF1ab/nsp5A-B89L89PcTtcCt11B.1.20.000009
ORF1ab/nsp5A-B89L89LctTctC11B.1.20.000009
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2110.025
ORF1ab/nsp5A-B89L89LctTctC11B.1.2340.000132
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2360.002053
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2390.001221
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2410.000812
ORF1ab/nsp5A-B89L89VCttGtt11B.1.2430.00007
ORF1ab/nsp5A-B89L89FCttTtt11B.1.258.170.000104
ORF1ab/nsp5A-B89L89LctTctC11B.1.258.30.001675
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2640.012346
ORF1ab/nsp5A-B89L89FCttTtt11B.1.2980.002114
ORF1ab/nsp5A-B89L89LctTctC11B.1.3130.006579
ORF1ab/nsp5A-B89L89LctTctG11B.1.351.30.000876
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3540.043478
ORF1ab/nsp5A-B89L89FCttTtt11B.1.36.10.00114
ORF1ab/nsp5A-B89L89FCttTtt11B.1.36.100.004785
ORF1ab/nsp5A-B89L89FCttTtt11B.1.36.240.006173
ORF1ab/nsp5A-B89L89FCttTtt11B.1.36.360.000602
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3620.001541
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3660.004878
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3700.008
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3820.008929
ORF1ab/nsp5A-B89L89FCttTtt11B.1.3950.007042
ORF1ab/nsp5A-B89L89FCttTtt11B.1.400.10.015152
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4040.001302
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4080.00369
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4170.028571
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4210.007463
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4230.010204
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4240.008065
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4320.011236
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4330.003195
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4370.020833
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4430.004673
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4500.011364
ORF1ab/nsp5A-B89L89LctTctC11B.1.4700.001404
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4730.019231
ORF1ab/nsp5A-B89L89FCttTtt11B.1.4870.019608
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5010.007353
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5410.004425
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5470.02439
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5510.00129
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5560.007519
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5660.019231
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5720.025
ORF1ab/nsp5A-B89L89FCttTtt11B.1.5990.00365
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6020.006536
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6050.005952
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6090.000479
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6120.002653
ORF1ab/nsp5A-B89L89del1cTtc-t11B.1.617.20.000004
ORF1ab/nsp5A-B89L89delCTT---11B.1.6210.000089
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6230.000536
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6280.000352
ORF1ab/nsp5A-B89L89FCttTtt11B.1.6370.000073
ORF1ab/nsp5A-B89L89FCttTtt11B.1.670.043478
ORF1ab/nsp5A-B89L89FCttTtt11B.1.810.021277
ORF1ab/nsp5A-B89L89LctTctC11B.310.003731
ORF1ab/nsp5A-B89L89FCttTtt11B.40.002208
ORF1ab/nsp5A-B89L89FCttTtt11B.450.003831
ORF1ab/nsp5A-B89L89FCttTtt11C.130.025641
ORF1ab/nsp5A-B89L89FCttTtt11C.160.00106
ORF1ab/nsp5A-B89L89FCttTtt11C.2.10.006667
ORF1ab/nsp5A-B89L89ICtTAtA11C.350.000774
ORF1ab/nsp5A-B89L89MCtTAtG11C.350.000774
ORF1ab/nsp5A-B89L89FCttTtt11C.350.000774
ORF1ab/nsp5A-B89L89FCttTtt11C.360.000911
ORF1ab/nsp5A-B89L89FCttTtt11C.37.10.002618
ORF1ab/nsp5A-B89L89delCTT---11N.40.004255
ORF1ab/nsp5A-B89L89FCttTtt11P.1.10.000318