CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 75 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B75L75LL3338LsynctCctA17723430.0024262310277-10279

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B75L75LctCctA4317723All0.000008
ORF1ab/nsp5A-B75L75LctCctA196483B.1.1.70.000017
ORF1ab/nsp5A-B75L75LctCctA32878AY.40.000005
ORF1ab/nsp5A-B75L75LctCctA3242B.10.000027
ORF1ab/nsp5A-B75L75LctCctA1185B.1.1770.000013
ORF1ab/nsp5A-B75L75LctCctA1114B.1.10.000018
ORF1ab/nsp5A-B75L75LctCctA178Q.80.000165
ORF1ab/nsp5A-B75L75LctCctA124AY.1200.000037
ORF1ab/nsp5A-B75L75LctCctA120B.1.177.810.000189
ORF1ab/nsp5A-B75L75LctCctA114AY.330.000067
ORF1ab/nsp5A-B75L75LctCctA110AY.470.000031
ORF1ab/nsp5A-B75L75LctCctA56B.1.258.170.00052
ORF1ab/nsp5A-B75L75LctCctA36B.1.6280.001057
ORF1ab/nsp5A-B75L75LctCctA14B.1.1.330.000421
ORF1ab/nsp5A-B75L75LctCctA12B.1.177.860.000183
ORF1ab/nsp5A-B75L75LctCctA11AY.480.000465