CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 70 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B70A70AA3333AsyngcTgcC3961870.47222210262-10264

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B70A70AgcTgcC187396All0.000036
ORF1ab/nsp5A-B70A70AgcTgcC477B.1.20.000035
ORF1ab/nsp5A-B70A70AgcTgcC5858P.50.794521
ORF1ab/nsp5A-B70A70AgcTgcC1842B.1.1.70.000016
ORF1ab/nsp5A-B70A70AgcTgcC2230AY.40.000034
ORF1ab/nsp5A-B70A70AgcTgcC113B.1.1600.000031
ORF1ab/nsp5A-B70A70AgcTgcC1112B.1.617.20.000041
ORF1ab/nsp5A-B70A70AgcTgcC211B.1.10.000036
ORF1ab/nsp5A-B70A70AgcTgcC1111B.1.4290.000259
ORF1ab/nsp5A-B70A70AgcTgcC99AY.440.000055
ORF1ab/nsp5A-B70A70AgcTgcC66AY.116.10.001869
ORF1ab/nsp5A-B70A70AgcTgcC66AY.200.000233
ORF1ab/nsp5A-B70A70AgcTgcC24B.1.1.5190.000079
ORF1ab/nsp5A-B70A70AgcTgcC33AY.1030.000019
ORF1ab/nsp5A-B70A70AgcTgcC33AY.290.000047
ORF1ab/nsp5A-B70A70AgcTgcC33AY.30.00003
ORF1ab/nsp5A-B70A70AgcTgcC33B.1.621.10.001517
ORF1ab/nsp5A-B70A70AgcTgcC120.055556
ORF1ab/nsp5A-B70A70AgcTgcC22AY.46.10.002053
ORF1ab/nsp5A-B70A70AgcTgcC22AY.9.10.000167
ORF1ab/nsp5A-B70A70AgcTgcC12B.1.4270.00005
ORF1ab/nsp5A-B70A70AgcTgcC11A0.000387
ORF1ab/nsp5A-B70A70AgcTgcC11AY.1060.000335
ORF1ab/nsp5A-B70A70AgcTgcC11AY.20.000356
ORF1ab/nsp5A-B70A70AgcTgcC11AY.3.10.000085
ORF1ab/nsp5A-B70A70AgcTgcC11AY.330.000067
ORF1ab/nsp5A-B70A70AgcTgcC11AY.50.000021
ORF1ab/nsp5A-B70A70AgcTgcC11AY.980.000079
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.1.2530.002506
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.1.280.000311
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.1.5260.003546
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.4420.035714
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.5240.001406
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.5260.000024
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.5610.000397
ORF1ab/nsp5A-B70A70AgcTgcC11B.1.940.027027
ORF1ab/nsp5A-B70A70AgcTgcC11C.350.000774
ORF1ab/nsp5A-B70A70AgcTgcC11P.10.000016
ORF1ab/nsp5A-B70A70AgcTgcC11P.1.150.000232
ORF1ab/nsp5A-B70A70AgcTgcC11P.1.70.000319