CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 7 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B7A7AA3270AsyngcAgcT57321220.02128410073-10075

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B7A7AgcAgcT1225732All0.000023
ORF1ab/nsp5A-B7A7AgcAgcT15019AY.30.00001
ORF1ab/nsp5A-B7A7AgcAgcT90112B.1.1.70.000081
ORF1ab/nsp5A-B7A7AgcAgcT272AY.1030.000012
ORF1ab/nsp5A-B7A7AgcAgcT149B.1.617.20.000004
ORF1ab/nsp5A-B7A7AgcAgcT146AY.40.000002
ORF1ab/nsp5A-B7A7AgcAgcT615B.10.000055
ORF1ab/nsp5A-B7A7AgcAgcT211AY.430.000009
ORF1ab/nsp5A-B7A7AgcAgcT27AY.50.000041
ORF1ab/nsp5A-B7A7AgcAgcT23AY.620.000871
ORF1ab/nsp5A-B7A7AgcAgcT23B.1.10.000036
ORF1ab/nsp5A-B7A7AgcAgcT12AY.460.000104
ORF1ab/nsp5A-B7A7AgcAgcT22B.1.2580.000133
ORF1ab/nsp5A-B7A7AgcAgcT22P.30.00319
ORF1ab/nsp5A-B7A7AgcAgcT11AY.3.10.000085
ORF1ab/nsp5A-B7A7AgcAgcT11B.1.1.2610.008621
ORF1ab/nsp5A-B7A7AgcAgcT11B.1.1.2650.003155
ORF1ab/nsp5A-B7A7AgcAgcT11B.1.1.390.00051
ORF1ab/nsp5A-B7A7AgcAgcT11B.1.177.650.000665
ORF1ab/nsp5A-B7A7AgcAgcT11B.1.5260.000024
ORF1ab/nsp5A-B7A7AgcAgcT11C.37.10.002618
ORF1ab/nsp5A-B7A7AgcAgcT11D.20.000075