CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 65 & Codon = aaC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B65N65NN3328NsynaaTaaC12221222110247-10249

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B65N65NaaTaaC12221222All0.000234
ORF1ab/nsp5A-B65N65NaaTaaC621621B.1.3620.956857
ORF1ab/nsp5A-B65N65NaaTaaC212212B.1.362.21
ORF1ab/nsp5A-B65N65NaaTaaC6565AY.30.000647
ORF1ab/nsp5A-B65N65NaaTaaC5858AY.470.001804
ORF1ab/nsp5A-B65N65NaaTaaC5454B.1.1770.000711
ORF1ab/nsp5A-B65N65NaaTaaC4242B.1.177.630.113514
ORF1ab/nsp5A-B65N65NaaTaaC2828AY.440.00017
ORF1ab/nsp5A-B65N65NaaTaaC2020B.1.1.70.000018
ORF1ab/nsp5A-B65N65NaaTaaC1515B.1.362.11
ORF1ab/nsp5A-B65N65NaaTaaC1212AY.40.000019
ORF1ab/nsp5A-B65N65NaaTaaC1010AY.1140.002311
ORF1ab/nsp5A-B65N65NaaTaaC1010B.1.1.500.006789
ORF1ab/nsp5A-B65N65NaaTaaC1010B.1.617.20.000038
ORF1ab/nsp5A-B65N65NaaTaaC55AY.1030.000031
ORF1ab/nsp5A-B65N65NaaTaaC55B.10.000046
ORF1ab/nsp5A-B65N65NaaTaaC55B.1.20.000044
ORF1ab/nsp5A-B65N65NaaTaaC44B.1.10.000073
ORF1ab/nsp5A-B65N65NaaTaaC33AY.430.000013
ORF1ab/nsp5A-B65N65NaaTaaC220.111111
ORF1ab/nsp5A-B65N65NaaTaaC22AY.200.000078
ORF1ab/nsp5A-B65N65NaaTaaC22AY.250.000012
ORF1ab/nsp5A-B65N65NaaTaaC22AY.60.000082
ORF1ab/nsp5A-B65N65NaaTaaC22B.1.36.190.018519
ORF1ab/nsp5A-B65N65NaaTaaC22B.1.4270.000101
ORF1ab/nsp5A-B65N65NaaTaaC22B.1.9.50.011364
ORF1ab/nsp5A-B65N65NaaTaaC22P.10.000032
ORF1ab/nsp5A-B65N65NaaTaaC22P.1.140.000096
ORF1ab/nsp5A-B65N65NaaTaaC11A.60.005128
ORF1ab/nsp5A-B65N65NaaTaaC11AY.1000.000046
ORF1ab/nsp5A-B65N65NaaTaaC11AY.1020.000027
ORF1ab/nsp5A-B65N65NaaTaaC11AY.1050.000643
ORF1ab/nsp5A-B65N65NaaTaaC11AY.1100.000113
ORF1ab/nsp5A-B65N65NaaTaaC11AY.1210.000135
ORF1ab/nsp5A-B65N65NaaTaaC11AY.230.00007
ORF1ab/nsp5A-B65N65NaaTaaC11AY.290.000016
ORF1ab/nsp5A-B65N65NaaTaaC11AY.4.20.000022
ORF1ab/nsp5A-B65N65NaaTaaC11AY.460.000104
ORF1ab/nsp5A-B65N65NaaTaaC11AY.50.000021
ORF1ab/nsp5A-B65N65NaaTaaC11AY.7.10.000113
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.1.1890.001513
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.1.3180.000302
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.1600.000031
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.1820.007246
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.2580.000067
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.3660.004878
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.3670.000792
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.5260.000024
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.6040.017241
ORF1ab/nsp5A-B65N65NaaTaaC11B.1.6370.000073
ORF1ab/nsp5A-B65N65NaaTaaC11C.370.000116
ORF1ab/nsp5A-B65N65NaaTaaC11D.20.000075
ORF1ab/nsp5A-B65N65NaaTaaC11P.20.000187