CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 58 & Codon = Ttc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B58L58FL3321FnonsynCtcTtc3443430.99709310226-10228

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B58L58FCtcTtc343344All0.000066
ORF1ab/nsp5A-B58L58FCtcTtc101101AY.98.10.004892
ORF1ab/nsp5A-B58L58FCtcTtc4444AY.440.000268
ORF1ab/nsp5A-B58L58FCtcTtc3232B.1.4290.000753
ORF1ab/nsp5A-B58L58FCtcTtc3232P.1.140.00153
ORF1ab/nsp5A-B58L58FCtcTtc1919B.1.3620.029276
ORF1ab/nsp5A-B58L58FCtcTtc1616AY.30.000159
ORF1ab/nsp5A-B58L58FCtcTtc1212B.1.617.20.000045
ORF1ab/nsp5A-B58L58FCtcTtc1111B.1.1.70.00001
ORF1ab/nsp5A-B58L58FCtcTtc1010AY.430.000044
ORF1ab/nsp5A-B58L58FCtcTtc99B.1.1.5190.000357
ORF1ab/nsp5A-B58L58FCtcTtc88AY.40.000012
ORF1ab/nsp5A-B58L58FCtcTtc55B.1.3510.000149
ORF1ab/nsp5A-B58L58FCtcTtc33AY.1030.000019
ORF1ab/nsp5A-B58L58FCtcTtc33AY.160.001139
ORF1ab/nsp5A-B58L58FCtcTtc33AY.610.000314
ORF1ab/nsp5A-B58L58FCtcTtc33B.1.177.710.030303
ORF1ab/nsp5A-B58L58FCtcTtc22AY.1020.000053
ORF1ab/nsp5A-B58L58FCtcTtc22AY.200.000078
ORF1ab/nsp5A-B58L58FCtcTtc22AY.250.000012
ORF1ab/nsp5A-B58L58FCtcTtc22B.1.2580.000133
ORF1ab/nsp5A-B58L58FCtcTtc11AY.1170.000085
ORF1ab/nsp5A-B58L58FCtcTtc11AY.1190.000035
ORF1ab/nsp5A-B58L58FCtcTtc11AY.390.000025
ORF1ab/nsp5A-B58L58FCtcTtc11AY.46.40.000165
ORF1ab/nsp5A-B58L58FCtcTtc11AY.46.60.000072
ORF1ab/nsp5A-B58L58FCtcTtc11AY.50.000021
ORF1ab/nsp5A-B58L58FCtcTtc11AY.750.000056
ORF1ab/nsp5A-B58L58FCtcTtc11AY.980.000079
ORF1ab/nsp5A-B58L58FCtcTtc11B.10.000009
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.10.000018
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.1.2220.000204
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.1.2840.000107
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.1.500.000679
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.1.5260.003546
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.1600.000031
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.160.150.00495
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.160.70.002079
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.177.350.000691
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.177.40.000211
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.3110.000275
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.4080.00369
ORF1ab/nsp5A-B58L58FCtcTtc11B.1.5260.000024
ORF1ab/nsp5A-B58L58FCtcTtc11C.370.000116
ORF1ab/nsp5A-B58L58FCtcTtc11D.20.000075