CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 45 & Codon = acA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B45T45TT3308TsynacCacA27575040.18280710187-10189

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B45T45TacCacA5042757All0.000096
ORF1ab/nsp5A-B45T45TacCacA118619B.1.1.70.000106
ORF1ab/nsp5A-B45T45TacCacA6276B.1.20.000053
ORF1ab/nsp5A-B45T45TacCacA172245AY.40.000268
ORF1ab/nsp5A-B45T45TacCacA7101AY.30.00007
ORF1ab/nsp5A-B45T45TacCacA193AY.440.000006
ORF1ab/nsp5A-B45T45TacCacA1086P.10.000158
ORF1ab/nsp5A-B45T45TacCacA1861AY.250.000108
ORF1ab/nsp5A-B45T45TacCacA760B.1.617.20.000026
ORF1ab/nsp5A-B45T45TacCacA4445AY.9.20.001616
ORF1ab/nsp5A-B45T45TacCacA343AY.430.000013
ORF1ab/nsp5A-B45T45TacCacA240B.10.000018
ORF1ab/nsp5A-B45T45TacCacA438AY.1030.000025
ORF1ab/nsp5A-B45T45TacCacA238AY.390.000049
ORF1ab/nsp5A-B45T45TacCacA3031AY.700.006255
ORF1ab/nsp5A-B45T45TacCacA525AY.200.000194
ORF1ab/nsp5A-B45T45TacCacA1821AY.470.00056
ORF1ab/nsp5A-B45T45TacCacA419B.1.10.000073
ORF1ab/nsp5A-B45T45TacCacA214B.1.3510.000059
ORF1ab/nsp5A-B45T45TacCacA213B.1.1770.000026
ORF1ab/nsp5A-B45T45TacCacA111AY.4.20.000022
ORF1ab/nsp5A-B45T45TacCacA1010AY.540.000953
ORF1ab/nsp5A-B45T45TacCacA710B.1.2210.000497
ORF1ab/nsp5A-B45T45TacCacA810B.1.5250.000905
ORF1ab/nsp5A-B45T45TacCacA18B.1.1.5190.00004
ORF1ab/nsp5A-B45T45TacCacA18B.1.1600.000031
ORF1ab/nsp5A-B45T45TacCacA48B.1.177.860.000734
ORF1ab/nsp5A-B45T45TacCacA18B.1.2430.00007
ORF1ab/nsp5A-B45T45TacCacA18B.1.5960.000087
ORF1ab/nsp5A-B45T45TacCacA13AY.1000.000046
ORF1ab/nsp5A-B45T45TacCacA13AY.910.00073
ORF1ab/nsp5A-B45T45TacCacA13P.20.000187
ORF1ab/nsp5A-B45T45TacCacA12AY.1210.000135
ORF1ab/nsp5A-B45T45TacCacA22AY.34.10.00102
ORF1ab/nsp5A-B45T45TacCacA110.055556
ORF1ab/nsp5A-B45T45TacCacA11A.2.20.001689
ORF1ab/nsp5A-B45T45TacCacA11AY.1100.000113
ORF1ab/nsp5A-B45T45TacCacA11AY.46.20.000635
ORF1ab/nsp5A-B45T45TacCacA11AY.620.000436
ORF1ab/nsp5A-B45T45TacCacA11AY.810.001992
ORF1ab/nsp5A-B45T45TacCacA11B.1.1.3980.003226
ORF1ab/nsp5A-B45T45TacCacA11B.1.177.40.000211
ORF1ab/nsp5A-B45T45TacCacA11C.160.00106