CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 305 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B305F305LF3568LnonsynTtcCtc76540.71052610967-10969

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B305F305LTtcCtc5476All0.00001
ORF1ab/nsp5A-B305F305LTtcCtc3240AY.40.00005
ORF1ab/nsp5A-B305F305LTtcCtc44AY.4.50.00043
ORF1ab/nsp5A-B305F305LTtcCtc24B.1.617.20.000008
ORF1ab/nsp5A-B305F305LTtcCtc23B.10.000018
ORF1ab/nsp5A-B305F305LTtcCtc23B.1.1.70.000002
ORF1ab/nsp5A-B305F305LTtcCtc33B.1.1600.000094
ORF1ab/nsp5A-B305F305LTtcCtc22AY.1030.000012
ORF1ab/nsp5A-B305F305LTtcCtc11A0.000387
ORF1ab/nsp5A-B305F305LTtcCtc11AY.46.60.000072
ORF1ab/nsp5A-B305F305LTtcCtc11B.1.1.3360.016667
ORF1ab/nsp5A-B305F305LTtcCtc11B.1.1.5190.00004
ORF1ab/nsp5A-B305F305LTtcCtc11B.1.351.30.000876
ORF1ab/nsp5A-B305F305LTtcCtc11B.1.4290.000024
ORF1ab/nsp5A-B305F305LTtcCtc11D.20.000075