CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 285 & Codon = Cct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B285A285PA3548PnonsynGctCct2323110907-10909

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B285A285PGctCct2323All0.000004
ORF1ab/nsp5A-B285A285PGctCct55AY.40.000008
ORF1ab/nsp5A-B285A285PGctCct44B.1.1.70.000004
ORF1ab/nsp5A-B285A285PGctCct33B.1.10.000054
ORF1ab/nsp5A-B285A285PGctCct11AY.230.00007
ORF1ab/nsp5A-B285A285PGctCct11AY.250.000006
ORF1ab/nsp5A-B285A285PGctCct11AY.4.20.000022
ORF1ab/nsp5A-B285A285PGctCct11AY.430.000004
ORF1ab/nsp5A-B285A285PGctCct11AY.440.000006
ORF1ab/nsp5A-B285A285PGctCct11B.1.1.5190.00004
ORF1ab/nsp5A-B285A285PGctCct11B.1.177.170.000821
ORF1ab/nsp5A-B285A285PGctCct11B.1.20.000009
ORF1ab/nsp5A-B285A285PGctCct11B.1.5260.000024
ORF1ab/nsp5A-B285A285PGctCct11B.1.617.10.000129
ORF1ab/nsp5A-B285A285PGctCct11D.20.000075