CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 272 & Codon = Ttg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B272L272LL3535LsynCtgTtg4256241340.097128910868-10870

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B272L272LCtgTtg413442562All0.000791
ORF1ab/nsp5A-B272L272LCtgTtg3214494AY.40.00005
ORF1ab/nsp5A-B272L272LCtgTtg14553AY.140.000088
ORF1ab/nsp5A-B272L272LCtgTtg892936B.1.1.70.00008
ORF1ab/nsp5A-B272L272LCtgTtg14641464AY.480.68093
ORF1ab/nsp5A-B272L272LCtgTtg1711360B.1.617.20.000644
ORF1ab/nsp5A-B272L272LCtgTtg11244B.1.3510.00003
ORF1ab/nsp5A-B272L272LCtgTtg521188AY.430.00023
ORF1ab/nsp5A-B272L272LCtgTtg10861086B.1.1.2770.823976
ORF1ab/nsp5A-B272L272LCtgTtg109906B.10.000998
ORF1ab/nsp5A-B272L272LCtgTtg590888B.1.20.005195
ORF1ab/nsp5A-B272L272LCtgTtg13461B.1.1770.000171
ORF1ab/nsp5A-B272L272LCtgTtg50381AY.250.000301
ORF1ab/nsp5A-B272L272LCtgTtg7266AY.1030.000043
ORF1ab/nsp5A-B272L272LCtgTtg9256B.1.10.000163
ORF1ab/nsp5A-B272L272LCtgTtg1220B.1.1.5190.00004
ORF1ab/nsp5A-B272L272LCtgTtg8196P.10.000126
ORF1ab/nsp5A-B272L272LCtgTtg13173AY.440.000079
ORF1ab/nsp5A-B272L272LCtgTtg1166AY.1020.000027
ORF1ab/nsp5A-B272L272LCtgTtg162162K.31
ORF1ab/nsp5A-B272L272LCtgTtg1153B.1.177.210.000076
ORF1ab/nsp5A-B272L272LCtgTtg7144B.1.6370.000512
ORF1ab/nsp5A-B272L272LCtgTtg18134AY.390.000445
ORF1ab/nsp5A-B272L272LCtgTtg14109AY.420.000563
ORF1ab/nsp5A-B272L272LCtgTtg6103B.1.2430.000418
ORF1ab/nsp5A-B272L272LCtgTtg496AY.1200.000149
ORF1ab/nsp5A-B272L272LCtgTtg1377AY.30.000129
ORF1ab/nsp5A-B272L272LCtgTtg473AY.200.000155
ORF1ab/nsp5A-B272L272LCtgTtg1469B.1.4290.000329
ORF1ab/nsp5A-B272L272LCtgTtg362AY.540.000286
ORF1ab/nsp5A-B272L272LCtgTtg157B.1.2210.000071
ORF1ab/nsp5A-B272L272LCtgTtg255AY.46.40.000329
ORF1ab/nsp5A-B272L272LCtgTtg254AY.230.000139
ORF1ab/nsp5A-B272L272LCtgTtg249B.1.1600.000062
ORF1ab/nsp5A-B272L272LCtgTtg248AY.980.000158
ORF1ab/nsp5A-B272L272LCtgTtg248B.1.360.000292
ORF1ab/nsp5A-B272L272LCtgTtg243AY.50.000041
ORF1ab/nsp5A-B272L272LCtgTtg441B.1.6210.000354
ORF1ab/nsp5A-B272L272LCtgTtg840AY.1000.000368
ORF1ab/nsp5A-B272L272LCtgTtg239AY.3.10.000171
ORF1ab/nsp5A-B272L272LCtgTtg138AY.1180.000063
ORF1ab/nsp5A-B272L272LCtgTtg238AY.1190.000071
ORF1ab/nsp5A-B272L272LCtgTtg337B.1.5260.000071
ORF1ab/nsp5A-B272L272LCtgTtg434C.370.000464
ORF1ab/nsp5A-B272L272LCtgTtg131AY.610.000105
ORF1ab/nsp5A-B272L272LCtgTtg2230AY.370.006953
ORF1ab/nsp5A-B272L272LCtgTtg1230B.1.2580.000799
ORF1ab/nsp5A-B272L272LCtgTtg228AY.99.20.000184
ORF1ab/nsp5A-B272L272LCtgTtg125AY.290.000016
ORF1ab/nsp5A-B272L272LCtgTtg120A0.000387
ORF1ab/nsp5A-B272L272LCtgTtg120AY.380.000499
ORF1ab/nsp5A-B272L272LCtgTtg820AY.470.000249
ORF1ab/nsp5A-B272L272LCtgTtg118AY.750.000056
ORF1ab/nsp5A-B272L272LCtgTtg117AD.20.000219
ORF1ab/nsp5A-B272L272LCtgTtg217B.1.617.10.000258
ORF1ab/nsp5A-B272L272LCtgTtg616AY.90.000406
ORF1ab/nsp5A-B272L272LCtgTtg316P.1.140.000143
ORF1ab/nsp5A-B272L272LCtgTtg415B.1.5960.000349
ORF1ab/nsp5A-B272L272LCtgTtg1414B.1.1.3690.006247
ORF1ab/nsp5A-B272L272LCtgTtg114B.1.177.810.000189
ORF1ab/nsp5A-B272L272LCtgTtg112AY.1170.000085
ORF1ab/nsp5A-B272L272LCtgTtg412AY.16.10.00188
ORF1ab/nsp5A-B272L272LCtgTtg912AY.350.002097
ORF1ab/nsp5A-B272L272LCtgTtg112AY.920.000287
ORF1ab/nsp5A-B272L272LCtgTtg112Q.30.000145
ORF1ab/nsp5A-B272L272LCtgTtg111AY.450.000122
ORF1ab/nsp5A-B272L272LCtgTtg110AY.39.10.00004
ORF1ab/nsp5A-B272L272LCtgTtg110B.1.3110.000275
ORF1ab/nsp5A-B272L272LCtgTtg29P.20.000373
ORF1ab/nsp5A-B272L272LCtgTtg18B.1.2340.000132
ORF1ab/nsp5A-B272L272LCtgTtg38D.20.000225
ORF1ab/nsp5A-B272L272LCtgTtg26AY.1080.002205
ORF1ab/nsp5A-B272L272LCtgTtg16B.1.6090.000479
ORF1ab/nsp5A-B272L272LCtgTtg15AY.1100.000113
ORF1ab/nsp5A-B272L272LCtgTtg15AY.530.000288
ORF1ab/nsp5A-B272L272LCtgTtg25B.1.1.390.001019
ORF1ab/nsp5A-B272L272LCtgTtg45B.1.4970.001259
ORF1ab/nsp5A-B272L272LCtgTtg55K.10.119048
ORF1ab/nsp5A-B272L272LCtgTtg34AY.870.002498
ORF1ab/nsp5A-B272L272LCtgTtg14AY.930.000273
ORF1ab/nsp5A-B272L272LCtgTtg14B.1.1.2940.001266
ORF1ab/nsp5A-B272L272LCtgTtg230.111111
ORF1ab/nsp5A-B272L272LCtgTtg23AY.360.000296
ORF1ab/nsp5A-B272L272LCtgTtg13AY.680.000274
ORF1ab/nsp5A-B272L272LCtgTtg13B.1.177.730.000566
ORF1ab/nsp5A-B272L272LCtgTtg33B.1.5090.002597
ORF1ab/nsp5A-B272L272LCtgTtg12AY.120.000316
ORF1ab/nsp5A-B272L272LCtgTtg22AY.120.20.002571
ORF1ab/nsp5A-B272L272LCtgTtg22B.1.1990.008264
ORF1ab/nsp5A-B272L272LCtgTtg22B.1.3420.2
ORF1ab/nsp5A-B272L272LCtgTtg12B.1.3610.001289
ORF1ab/nsp5A-B272L272LCtgTtg11AH.30.003802
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.1.2980.000862
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.1.610.008772
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.1460.004237
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.258.40.003448
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.2790.000514
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.2930.0125
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.4370.020833
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.5480.035714
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.6270.00202
ORF1ab/nsp5A-B272L272LCtgTtg11B.1.780.008547