CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 260

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B260A260VA3523VnonsyngCcgTc16336163340.99987810832-10834
ORF1ab/nsp5A-B260A260VA3523VnonsyngCCgTT1633620.00012242910832-10834
ORF1ab/nsp5A-B260A260AA3523AsyngcCgcT680466870.98280410832-10834
ORF1ab/nsp5A-B260A260AA3523AsyngcCgcA68041110.016313910832-10834
ORF1ab/nsp5A-B260A260AA3523AsyngcCgcG680460.00088183410832-10834
ORF1ab/nsp5A-B260A260TA3523TnonsynGccAcc172172110832-10834
ORF1ab/nsp5A-B260A260SA3523SnonsynGccTcc78740.94871810832-10834
ORF1ab/nsp5A-B260A260SA3523SnonsynGcCTcT7820.02564110832-10834
ORF1ab/nsp5A-B260A260SA3523SnonsynGcCTcG7820.02564110832-10834
ORF1ab/nsp5A-B260A260delA3523deldelGCC---5555110832-10834
ORF1ab/nsp5A-B260A260DA3523DnonsyngCcgAc2121110832-10834
ORF1ab/nsp5A-B260A260GA3523GnonsyngCcgGc77110832-10834
ORF1ab/nsp5A-B260A260PA3523PnonsynGccCcc640.66666710832-10834
ORF1ab/nsp5A-B260A260PA3523PnonsynGcCCcG610.16666710832-10834
ORF1ab/nsp5A-B260A260PA3523PnonsynGcCCcA610.16666710832-10834
ORF1ab/nsp5A-B260A260del2A3523del2delGCc--c420.510832-10834
ORF1ab/nsp5A-B260A260del2A3523del2delgCCg--420.510832-10834
ORF1ab/nsp5A-B260A260del1A3523del1delGcc-cc320.66666710832-10834
ORF1ab/nsp5A-B260A260del1A3523del1delgCcg-c310.33333310832-10834
ORF1ab/nsp5A-B260A260LA3523LnonsynGCcCTc22110832-10834
ORF1ab/nsp5A-B260A260CA3523CnonsynGCcTGc11110832-10834
ORF1ab/nsp5A-B260A260EA3523EnonsyngCCgAA11110832-10834

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B260A260VgCcgTc1633416336All0.003124
ORF1ab/nsp5A-B260A260VgCCgTT216336All0
ORF1ab/nsp5A-B260A260AgcCgcT66876804All0.001279
ORF1ab/nsp5A-B260A260AgcCgcA1116804All0.000021
ORF1ab/nsp5A-B260A260AgcCgcG66804All0.000001
ORF1ab/nsp5A-B260A260VgCcgTc30603060AY.440.018625
ORF1ab/nsp5A-B260A260AgcCgcT27742785B.1.1.70.002483
ORF1ab/nsp5A-B260A260AgcCgcA102785B.1.1.70.000009
ORF1ab/nsp5A-B260A260AgcCgcG12785B.1.1.70.000001
ORF1ab/nsp5A-B260A260VgCcgTc26902691AY.40.004187
ORF1ab/nsp5A-B260A260VgCCgTT12691AY.40.000002
ORF1ab/nsp5A-B260A260VgCcgTc25132513B.1.1.70.00225
ORF1ab/nsp5A-B260A260VgCcgTc12281228B.1.617.20.004624
ORF1ab/nsp5A-B260A260VgCcgTc920920B.1.1770.012114
ORF1ab/nsp5A-B260A260VgCcgTc836836AY.430.003704
ORF1ab/nsp5A-B260A260VgCcgTc592592AY.290.009338
ORF1ab/nsp5A-B260A260VgCcgTc536536B.1.20.00472
ORF1ab/nsp5A-B260A260AgcCgcT455457AY.40.000708
ORF1ab/nsp5A-B260A260AgcCgcA2457AY.40.000003
ORF1ab/nsp5A-B260A260AgcCgcT312328B.1.617.20.001175
ORF1ab/nsp5A-B260A260AgcCgcA16328B.1.617.20.00006
ORF1ab/nsp5A-B260A260AgcCgcT271289B.1.1770.003568
ORF1ab/nsp5A-B260A260AgcCgcA18289B.1.1770.000237
ORF1ab/nsp5A-B260A260VgCcgTc284284B.1.351.50.170264
ORF1ab/nsp5A-B260A260VgCcgTc231231B.1.1460.978814
ORF1ab/nsp5A-B260A260AgcCgcT218218AY.390.005387
ORF1ab/nsp5A-B260A260AgcCgcT206206AY.490.658147
ORF1ab/nsp5A-B260A260VgCcgTc199199AY.1030.001236
ORF1ab/nsp5A-B260A260AgcCgcT178181AY.1030.001105
ORF1ab/nsp5A-B260A260AgcCgcA3181AY.1030.000019
ORF1ab/nsp5A-B260A260AgcCgcT175177AY.1190.006179
ORF1ab/nsp5A-B260A260AgcCgcA2177AY.1190.000071
ORF1ab/nsp5A-B260A260TGccAcc172172All0.000033
ORF1ab/nsp5A-B260A260AgcCgcT172172AY.440.001047
ORF1ab/nsp5A-B260A260VgCcgTc169169B.1.36.280.971264
ORF1ab/nsp5A-B260A260VgCcgTc159159AY.30.001581
ORF1ab/nsp5A-B260A260VgCcgTc143143B.1.4160.181472
ORF1ab/nsp5A-B260A260AgcCgcT104107AY.250.000626
ORF1ab/nsp5A-B260A260AgcCgcA3107AY.250.000018
ORF1ab/nsp5A-B260A260VgCcgTc106106B.10.000971
ORF1ab/nsp5A-B260A260VgCcgTc103104AY.1020.002731
ORF1ab/nsp5A-B260A260VgCCgTT1104AY.1020.000027
ORF1ab/nsp5A-B260A260AgcCgcT99101AY.30.000985
ORF1ab/nsp5A-B260A260AgcCgcA1101AY.30.00001
ORF1ab/nsp5A-B260A260AgcCgcG1101AY.30.00001
ORF1ab/nsp5A-B260A260AgcCgcT94100B.10.000861
ORF1ab/nsp5A-B260A260AgcCgcA6100B.10.000055
ORF1ab/nsp5A-B260A260AgcCgcT8490AY.430.000372
ORF1ab/nsp5A-B260A260AgcCgcA690AY.430.000027
ORF1ab/nsp5A-B260A260VgCcgTc9090B.1.4290.002118
ORF1ab/nsp5A-B260A260VgCcgTc8888B.1.1.2220.017952
ORF1ab/nsp5A-B260A260VgCcgTc8888B.1.2430.006123
ORF1ab/nsp5A-B260A260AgcCgcT8788B.1.3510.002586
ORF1ab/nsp5A-B260A260AgcCgcA188B.1.3510.00003
ORF1ab/nsp5A-B260A260VgCcgTc8585B.1.10.001542
ORF1ab/nsp5A-B260A260AgcCgcT6780B.1.1.5190.002661
ORF1ab/nsp5A-B260A260AgcCgcA1380B.1.1.5190.000516
ORF1ab/nsp5A-B260A260AgcCgcT8080B.1.20.000704
ORF1ab/nsp5A-B260A260SGccTcc7478All0.000014
ORF1ab/nsp5A-B260A260SGcCTcT278All0
ORF1ab/nsp5A-B260A260SGcCTcG278All0
ORF1ab/nsp5A-B260A260VgCcgTc7878AY.390.001927
ORF1ab/nsp5A-B260A260VgCcgTc7777B.1.258.170.008006
ORF1ab/nsp5A-B260A260VgCcgTc7575AY.990.078699
ORF1ab/nsp5A-B260A260VgCcgTc7474AY.116.10.023046
ORF1ab/nsp5A-B260A260AgcCgcT7373P.10.00115
ORF1ab/nsp5A-B260A260VgCcgTc6666AY.250.000397
ORF1ab/nsp5A-B260A260AgcCgcT6363AY.260.001784
ORF1ab/nsp5A-B260A260VgCcgTc5858B.1.1.5190.002303
ORF1ab/nsp5A-B260A260VgCcgTc5858B.1.5260.001363
ORF1ab/nsp5A-B260A260delGCC---5555All0.000011
ORF1ab/nsp5A-B260A260VgCcgTc5353AY.850.02264
ORF1ab/nsp5A-B260A260TGccAcc4949AY.250.000295
ORF1ab/nsp5A-B260A260AgcCgcT4849AY.98.10.002325
ORF1ab/nsp5A-B260A260AgcCgcA149AY.98.10.000048
ORF1ab/nsp5A-B260A260AgcCgcT4848B.1.6040.827586
ORF1ab/nsp5A-B260A260VgCcgTc4848P.10.000756
ORF1ab/nsp5A-B260A260VgCcgTc4646B.1.4270.002323
ORF1ab/nsp5A-B260A260AgcCgcT4545Q.80.007421
ORF1ab/nsp5A-B260A260AgcCgcT4044AY.1020.001061
ORF1ab/nsp5A-B260A260AgcCgcA444AY.1020.000106
ORF1ab/nsp5A-B260A260AgcCgcT3844B.1.10.000689
ORF1ab/nsp5A-B260A260AgcCgcA644B.1.10.000109
ORF1ab/nsp5A-B260A260VgCcgTc4141AY.90.002771
ORF1ab/nsp5A-B260A260VgCcgTc4040B.1.6190.034843
ORF1ab/nsp5A-B260A260VgCcgTc3838AY.260.001076
ORF1ab/nsp5A-B260A260VgCcgTc3838B.1.1.3180.011467
ORF1ab/nsp5A-B260A260AgcCgcT3536B.1.5260.000823
ORF1ab/nsp5A-B260A260AgcCgcA136B.1.5260.000024
ORF1ab/nsp5A-B260A260VgCcgTc3333AY.970.056122
ORF1ab/nsp5A-B260A260AgcCgcT3232AY.1130.004556
ORF1ab/nsp5A-B260A260VgCcgTc3131B.1.1.3970.06982
ORF1ab/nsp5A-B260A260VgCcgTc3131B.1.177.210.002371
ORF1ab/nsp5A-B260A260AgcCgcT3131B.1.360.004523
ORF1ab/nsp5A-B260A260AgcCgcT3030AY.200.001166
ORF1ab/nsp5A-B260A260AgcCgcT2929B.1.428.11
ORF1ab/nsp5A-B260A260VgCcgTc2929B.1.6210.002567
ORF1ab/nsp5A-B260A260VgCcgTc2828AY.200.001088
ORF1ab/nsp5A-B260A260VgCcgTc2828B.1.258.140.027451
ORF1ab/nsp5A-B260A260VgCcgTc2828B.1.438.10.003003
ORF1ab/nsp5A-B260A260VgCcgTc2626AY.230.001813
ORF1ab/nsp5A-B260A260SGccTcc2525B.1.617.20.000094
ORF1ab/nsp5A-B260A260AgcCgcT2023AY.50.000413
ORF1ab/nsp5A-B260A260AgcCgcA323AY.50.000062
ORF1ab/nsp5A-B260A260VgCcgTc2323B.1.5170.009821
ORF1ab/nsp5A-B260A260VgCcgTc2222AY.4.20.000477
ORF1ab/nsp5A-B260A260VgCcgTc2222B.1.3460.028834
ORF1ab/nsp5A-B260A260AgcCgcT2222B.1.438.10.00236
ORF1ab/nsp5A-B260A260VgCcgTc2222B.1.6160.536585
ORF1ab/nsp5A-B260A260DgCcgAc2121All0.000004
ORF1ab/nsp5A-B260A260AgcCgcT2121AY.590.011123
ORF1ab/nsp5A-B260A260AgcCgcT2121AY.9.10.001758
ORF1ab/nsp5A-B260A260VgCcgTc2121B.1.1.860.75
ORF1ab/nsp5A-B260A260AgcCgcT1921B.1.2580.001264
ORF1ab/nsp5A-B260A260AgcCgcA221B.1.2580.000133
ORF1ab/nsp5A-B260A260AgcCgcT2121B.1.4740.039924
ORF1ab/nsp5A-B260A260delGCC---2020B.1.1.70.000018
ORF1ab/nsp5A-B260A260VgCcgTc2020B.1.3510.000595
ORF1ab/nsp5A-B260A260TGccAcc2020B.1.3690.005705
ORF1ab/nsp5A-B260A260AgcCgcT1919AY.1110.00348
ORF1ab/nsp5A-B260A260VgCcgTc1919AY.39.10.000753
ORF1ab/nsp5A-B260A260TGccAcc1919AY.40.00003
ORF1ab/nsp5A-B260A260VgCcgTc1919AY.450.002312
ORF1ab/nsp5A-B260A260AgcCgcT1919C.370.002205
ORF1ab/nsp5A-B260A260VgCcgTc1818AY.1190.000636
ORF1ab/nsp5A-B260A260VgCcgTc1818AY.360.002668
ORF1ab/nsp5A-B260A260VgCcgTc1818AY.410.005291
ORF1ab/nsp5A-B260A260VgCcgTc1818AY.460.001873
ORF1ab/nsp5A-B260A260VgCcgTc1818AY.50.000372
ORF1ab/nsp5A-B260A260VgCcgTc1818B.1.1.2840.001933
ORF1ab/nsp5A-B260A260TGccAcc1818B.1.1.70.000016
ORF1ab/nsp5A-B260A260VgCcgTc1818B.1.4000.007722
ORF1ab/nsp5A-B260A260VgCcgTc1717B.1.1.500.011541
ORF1ab/nsp5A-B260A260VgCcgTc1717C.37.10.044503
ORF1ab/nsp5A-B260A260AgcCgcT1616AY.170.131148
ORF1ab/nsp5A-B260A260AgcCgcT1616AY.670.007428
ORF1ab/nsp5A-B260A260AgcCgcT1616B.1.2340.002111
ORF1ab/nsp5A-B260A260VgCcgTc1616B.1.3620.024653
ORF1ab/nsp5A-B260A260AgcCgcT1616B.1.4290.000376
ORF1ab/nsp5A-B260A260VgCcgTc1616B.1.5820.007851
ORF1ab/nsp5A-B260A260VgCcgTc1515AY.1000.00069
ORF1ab/nsp5A-B260A260VgCcgTc1515AY.330.001002
ORF1ab/nsp5A-B260A260VgCcgTc1515AY.540.00143
ORF1ab/nsp5A-B260A260AgcCgcT1515B.1.1600.000468
ORF1ab/nsp5A-B260A260AgcCgcT1515B.1.4270.000757
ORF1ab/nsp5A-B260A260AgcCgcT1515B.1.466.20.005869
ORF1ab/nsp5A-B260A260AgcCgcT1414AY.420.000563
ORF1ab/nsp5A-B260A260VgCcgTc1414B0.001789
ORF1ab/nsp5A-B260A260VgCcgTc1414B.1.1.2140.000776
ORF1ab/nsp5A-B260A260AgcCgcT1414B.1.1.280.004357
ORF1ab/nsp5A-B260A260VgCcgTc1414B.1.362.10.933333
ORF1ab/nsp5A-B260A260VgCcgTc1313AY.470.000404
ORF1ab/nsp5A-B260A260AgcCgcT1313B.1.1.1580.158537
ORF1ab/nsp5A-B260A260TGccAcc1313B.1.1.5190.000516
ORF1ab/nsp5A-B260A260VgCcgTc1313B.1.177.810.002461
ORF1ab/nsp5A-B260A260VgCcgTc1313B.1.360.001897
ORF1ab/nsp5A-B260A260VgCcgTc1313B.1.5960.001133
ORF1ab/nsp5A-B260A260VgCcgTc1212B.1.1600.000374
ORF1ab/nsp5A-B260A260VgCcgTc1212B.1.4090.009375
ORF1ab/nsp5A-B260A260VgCcgTc1111A.2.50.005489
ORF1ab/nsp5A-B260A260VgCcgTc1111AY.350.002564
ORF1ab/nsp5A-B260A260AgcCgcT1011AY.4.20.000217
ORF1ab/nsp5A-B260A260AgcCgcA111AY.4.20.000022
ORF1ab/nsp5A-B260A260AgcCgcT1111AY.460.001145
ORF1ab/nsp5A-B260A260VgCcgTc1111AY.46.60.000794
ORF1ab/nsp5A-B260A260AgcCgcT1111P.1.140.000526
ORF1ab/nsp5A-B260A260AgcCgcT1010AY.290.000158
ORF1ab/nsp5A-B260A260VgCcgTc1010AY.46.40.001645
ORF1ab/nsp5A-B260A260VgCcgTc1010B.1.1.330.004209
ORF1ab/nsp5A-B260A260AgcCgcT1010B.1.110.30.007184
ORF1ab/nsp5A-B260A260VgCcgTc1010B.1.160.200.089286
ORF1ab/nsp5A-B260A260VgCcgTc1010B.1.2400.002156
ORF1ab/nsp5A-B260A260AgcCgcT1010R.10.0009
ORF1ab/nsp5A-B260A260VgCcgTc99A.270.014901
ORF1ab/nsp5A-B260A260VgCcgTc99AY.1100.001014
ORF1ab/nsp5A-B260A260AgcCgcT99AY.1200.000335
ORF1ab/nsp5A-B260A260AgcCgcT99AY.230.000628
ORF1ab/nsp5A-B260A260VgCcgTc99AY.420.000362
ORF1ab/nsp5A-B260A260AgcCgcT99AY.610.000943
ORF1ab/nsp5A-B260A260VgCcgTc99AY.700.001877
ORF1ab/nsp5A-B260A260VgCcgTc99AY.98.10.000436
ORF1ab/nsp5A-B260A260VgCcgTc99B.1.1.1350.042254
ORF1ab/nsp5A-B260A260VgCcgTc99B.1.1.3220.078947
ORF1ab/nsp5A-B260A260AgcCgcT99B.1.177.160.00598
ORF1ab/nsp5A-B260A260VgCcgTc99B.1.3110.002471
ORF1ab/nsp5A-B260A260AgcCgcT99B.1.3960.006351
ORF1ab/nsp5A-B260A260VgCcgTc99C.370.001045
ORF1ab/nsp5A-B260A260delGCC---88AY.40.000012
ORF1ab/nsp5A-B260A260DgCcgAc88AY.40.000012
ORF1ab/nsp5A-B260A260AgcCgcT88AY.540.000763
ORF1ab/nsp5A-B260A260VgCcgTc88AY.750.000448
ORF1ab/nsp5A-B260A260VgCcgTc88AY.980.000632
ORF1ab/nsp5A-B260A260VgCcgTc88B.1.1.3060.003507
ORF1ab/nsp5A-B260A260VgCcgTc88B.1.1.4340.002788
ORF1ab/nsp5A-B260A260AgcCgcT88B.1.6210.000708
ORF1ab/nsp5A-B260A260VgCcgTc88B.400.002914
ORF1ab/nsp5A-B260A260GgCcgGc77All0.000001
ORF1ab/nsp5A-B260A260VgCcgTc77AY.1170.000592
ORF1ab/nsp5A-B260A260AgcCgcT77AY.410.002058
ORF1ab/nsp5A-B260A260SGccTcc77AY.440.000043
ORF1ab/nsp5A-B260A260VgCcgTc77AY.800.007901
ORF1ab/nsp5A-B260A260VgCcgTc77AY.9.10.000586
ORF1ab/nsp5A-B260A260VgCcgTc77AY.920.002011
ORF1ab/nsp5A-B260A260AgcCgcT77B.1.1.500.004752
ORF1ab/nsp5A-B260A260VgCcgTc77B.1.2580.000466
ORF1ab/nsp5A-B260A260VgCcgTc77B.1.5970.032407
ORF1ab/nsp5A-B260A260VgCcgTc77B.1.5980.118644
ORF1ab/nsp5A-B260A260VgCcgTc77P.1.140.000335
ORF1ab/nsp5A-B260A260AgcCgcT77P.20.001306
ORF1ab/nsp5A-B260A260PGccCcc46All0.000001
ORF1ab/nsp5A-B260A260PGcCCcG16All0
ORF1ab/nsp5A-B260A260PGcCCcA16All0
ORF1ab/nsp5A-B260A260VgCcgTc66AY.1060.002009
ORF1ab/nsp5A-B260A260AgcCgcT66AY.1140.001387
ORF1ab/nsp5A-B260A260VgCcgTc66AY.1180.000376
ORF1ab/nsp5A-B260A260VgCcgTc66AY.1200.000223
ORF1ab/nsp5A-B260A260VgCcgTc66AY.130.000966
ORF1ab/nsp5A-B260A260VgCcgTc66AY.29.10.001323
ORF1ab/nsp5A-B260A260TGccAcc66AY.4.20.00013
ORF1ab/nsp5A-B260A260AgcCgcT66AY.60.000247
ORF1ab/nsp5A-B260A260AgcCgcT66AY.750.000336
ORF1ab/nsp5A-B260A260VgCcgTc66AY.840.002625
ORF1ab/nsp5A-B260A260AgcCgcT66AY.9.20.00022
ORF1ab/nsp5A-B260A260AgcCgcT66AY.960.012448
ORF1ab/nsp5A-B260A260VgCcgTc66B.1.1.280.001867
ORF1ab/nsp5A-B260A260VgCcgTc66B.1.1670.046875
ORF1ab/nsp5A-B260A260AgcCgcT66B.1.177.70.000989
ORF1ab/nsp5A-B260A260VgCcgTc66B.1.214.20.003597
ORF1ab/nsp5A-B260A260TGccAcc66B.1.2210.000426
ORF1ab/nsp5A-B260A260AgcCgcT66Q.10.000758
ORF1ab/nsp5A-B260A260AgcCgcT45A0.001548
ORF1ab/nsp5A-B260A260AgcCgcA15A0.000387
ORF1ab/nsp5A-B260A260AgcCgcT55A.23.10.003521
ORF1ab/nsp5A-B260A260AgcCgcT55AY.1160.001434
ORF1ab/nsp5A-B260A260AgcCgcT55AY.20.001781
ORF1ab/nsp5A-B260A260VgCcgTc55AY.3.10.000426
ORF1ab/nsp5A-B260A260AgcCgcT55AY.330.000334
ORF1ab/nsp5A-B260A260AgcCgcT55AY.39.10.000198
ORF1ab/nsp5A-B260A260VgCcgTc55B.1.1.1890.007564
ORF1ab/nsp5A-B260A260AgcCgcT45B.1.1.2140.000222
ORF1ab/nsp5A-B260A260AgcCgcA15B.1.1.2140.000055
ORF1ab/nsp5A-B260A260VgCcgTc55B.1.1.3170.002058
ORF1ab/nsp5A-B260A260AgcCgcT55B.1.1.460.021834
ORF1ab/nsp5A-B260A260VgCcgTc55B.1.177.40.001055
ORF1ab/nsp5A-B260A260VgCcgTc55B.1.258.40.017241
ORF1ab/nsp5A-B260A260VgCcgTc55B.1.5090.004329
ORF1ab/nsp5A-B260A260AgcCgcT55B.1.5250.000566
ORF1ab/nsp5A-B260A260AgcCgcT55B.1.5760.004533
ORF1ab/nsp5A-B260A260VgCcgTc55B.6.60.004444
ORF1ab/nsp5A-B260A260SGcCTcG240.111111
ORF1ab/nsp5A-B260A260SGccTcc240.111111
ORF1ab/nsp5A-B260A260del2GCc--c24All0
ORF1ab/nsp5A-B260A260del2gCCg--24All0
ORF1ab/nsp5A-B260A260TGccAcc44AY.1030.000025
ORF1ab/nsp5A-B260A260VgCcgTc44AY.1080.00441
ORF1ab/nsp5A-B260A260AgcCgcT44AY.1150.020833
ORF1ab/nsp5A-B260A260AgcCgcT44AY.1180.000251
ORF1ab/nsp5A-B260A260AgcCgcT44AY.120.10.001284
ORF1ab/nsp5A-B260A260VgCcgTc44AY.270.000259
ORF1ab/nsp5A-B260A260SGccTcc44AY.40.000006
ORF1ab/nsp5A-B260A260AgcCgcT44AY.4.30.003367
ORF1ab/nsp5A-B260A260VgCcgTc44AY.4.30.003367
ORF1ab/nsp5A-B260A260AgcCgcT44AY.46.40.000658
ORF1ab/nsp5A-B260A260VgCcgTc44AY.5.40.001107
ORF1ab/nsp5A-B260A260VgCcgTc44AY.610.000419
ORF1ab/nsp5A-B260A260TGccAcc44AY.610.000419
ORF1ab/nsp5A-B260A260VgCcgTc44AY.640.002381
ORF1ab/nsp5A-B260A260AgcCgcT34B0.000383
ORF1ab/nsp5A-B260A260AgcCgcA14B0.000128
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.1.370.000771
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.1.3910.034188
ORF1ab/nsp5A-B260A260SGccTcc44B.1.1.70.000004
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.177.350.002764
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.2060.003263
ORF1ab/nsp5A-B260A260AgcCgcT44B.1.2210.000284
ORF1ab/nsp5A-B260A260AgcCgcT34B.1.2430.000209
ORF1ab/nsp5A-B260A260AgcCgcA14B.1.2430.00007
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.3810.03125
ORF1ab/nsp5A-B260A260VgCcgTc44B.1.466.20.001565
ORF1ab/nsp5A-B260A260VgCcgTc44D.20.0003
ORF1ab/nsp5A-B260A260AgcCgcT34D.20.000225
ORF1ab/nsp5A-B260A260AgcCgcG14D.20.000075
ORF1ab/nsp5A-B260A260VgCcgTc44P.1.100.001078
ORF1ab/nsp5A-B260A260VgCcgTc33AD.20.000657
ORF1ab/nsp5A-B260A260del1Gcc-cc23All0
ORF1ab/nsp5A-B260A260del1gCcg-c13All0
ORF1ab/nsp5A-B260A260VgCcgTc33AY.1130.000427
ORF1ab/nsp5A-B260A260VgCcgTc33AY.120.10.000963
ORF1ab/nsp5A-B260A260VgCcgTc33AY.1210.000406
ORF1ab/nsp5A-B260A260AgcCgcT33AY.130.000483
ORF1ab/nsp5A-B260A260AgcCgcT33AY.16.10.00141
ORF1ab/nsp5A-B260A260AgcCgcT33AY.270.000194
ORF1ab/nsp5A-B260A260AgcCgcT33AY.340.000291
ORF1ab/nsp5A-B260A260AgcCgcT33AY.34.10.00153
ORF1ab/nsp5A-B260A260VgCcgTc33AY.39.20.004622
ORF1ab/nsp5A-B260A260delGCC---33AY.4.50.000322
ORF1ab/nsp5A-B260A260SGccTcc33AY.430.000013
ORF1ab/nsp5A-B260A260TGccAcc33AY.440.000018
ORF1ab/nsp5A-B260A260AgcCgcT33AY.450.000365
ORF1ab/nsp5A-B260A260VgCcgTc33AY.480.001395
ORF1ab/nsp5A-B260A260SGccTcc33AY.50.000062
ORF1ab/nsp5A-B260A260VgCcgTc33AY.5.30.001012
ORF1ab/nsp5A-B260A260VgCcgTc33AY.580.002722
ORF1ab/nsp5A-B260A260VgCcgTc33AY.620.001307
ORF1ab/nsp5A-B260A260AgcCgcT33AY.640.001786
ORF1ab/nsp5A-B260A260VgCcgTc33AY.680.000821
ORF1ab/nsp5A-B260A260VgCcgTc33AY.710.001425
ORF1ab/nsp5A-B260A260AgcCgcT33AY.740.000347
ORF1ab/nsp5A-B260A260VgCcgTc33AY.740.000347
ORF1ab/nsp5A-B260A260TGccAcc33AY.9.10.000251
ORF1ab/nsp5A-B260A260AgcCgcT33AY.900.002053
ORF1ab/nsp5A-B260A260AgcCgcT33AY.980.000237
ORF1ab/nsp5A-B260A260VgCcgTc33AY.99.20.000276
ORF1ab/nsp5A-B260A260AgcCgcT33AZ.20.002463
ORF1ab/nsp5A-B260A260VgCcgTc33AZ.60.02521
ORF1ab/nsp5A-B260A260SGccTcc33B.10.000027
ORF1ab/nsp5A-B260A260TGccAcc33B.10.000027
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.1.2220.000612
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.1.250.001706
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.1.2740.015152
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.1.3110.001074
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.1.3170.001235
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.1.390.001529
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.160.160.002788
ORF1ab/nsp5A-B260A260delGCC---33B.1.1770.00004
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.177.620.003576
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.177.860.00055
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.2060.002447
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.2410.002435
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.3350.030928
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.36.100.014354
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.3690.000856
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.4280.003061
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.5950.000783
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.5950.000783
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.5960.000261
ORF1ab/nsp5A-B260A260AgcCgcT33B.1.617.10.000387
ORF1ab/nsp5A-B260A260VgCcgTc33B.1.6370.000219
ORF1ab/nsp5A-B260A260VgCcgTc33C.20.048387
ORF1ab/nsp5A-B260A260VgCcgTc33P.1.10.20.125
ORF1ab/nsp5A-B260A260VgCcgTc33P.1.170.000485
ORF1ab/nsp5A-B260A260VgCcgTc33Q.10.000379
ORF1ab/nsp5A-B260A260VgCcgTc33Q.80.000495
ORF1ab/nsp5A-B260A260LGCcCTc220.111111
ORF1ab/nsp5A-B260A260delGCC---220.111111
ORF1ab/nsp5A-B260A260VgCcgTc22A.23.10.001408
ORF1ab/nsp5A-B260A260VgCcgTc22AE.30.064516
ORF1ab/nsp5A-B260A260VgCcgTc22AE.80.000978
ORF1ab/nsp5A-B260A260LGCcCTc22All0
ORF1ab/nsp5A-B260A260AgcCgcT22AU.20.004843
ORF1ab/nsp5A-B260A260VgCcgTc22AY.100.00106
ORF1ab/nsp5A-B260A260AgcCgcT22AY.1000.000092
ORF1ab/nsp5A-B260A260VgCcgTc22AY.1010.000981
ORF1ab/nsp5A-B260A260AgcCgcT22AY.1100.000225
ORF1ab/nsp5A-B260A260VgCcgTc22AY.1110.000366
ORF1ab/nsp5A-B260A260VgCcgTc22AY.1140.000462
ORF1ab/nsp5A-B260A260AgcCgcT22AY.1170.000169
ORF1ab/nsp5A-B260A260GgCcgGc22AY.1190.000071
ORF1ab/nsp5A-B260A260VgCcgTc22AY.140.000176
ORF1ab/nsp5A-B260A260AgcCgcT22AY.140.000176
ORF1ab/nsp5A-B260A260AgcCgcT22AY.220.004184
ORF1ab/nsp5A-B260A260SGccTcc22AY.230.000139
ORF1ab/nsp5A-B260A260TGccAcc22AY.30.00002
ORF1ab/nsp5A-B260A260VgCcgTc22AY.320.001065
ORF1ab/nsp5A-B260A260VgCcgTc22AY.34.10.00102
ORF1ab/nsp5A-B260A260AgcCgcT22AY.4.50.000215
ORF1ab/nsp5A-B260A260TGccAcc22AY.430.000009
ORF1ab/nsp5A-B260A260VgCcgTc22AY.530.000575
ORF1ab/nsp5A-B260A260VgCcgTc22AY.560.00321
ORF1ab/nsp5A-B260A260AgcCgcT22AY.690.000373
ORF1ab/nsp5A-B260A260AgcCgcT22AY.70.000392
ORF1ab/nsp5A-B260A260AgcCgcT22AY.7.10.000225
ORF1ab/nsp5A-B260A260TGccAcc22AY.740.000231
ORF1ab/nsp5A-B260A260AgcCgcT22AY.830.003448
ORF1ab/nsp5A-B260A260AgcCgcT22AY.90.000135
ORF1ab/nsp5A-B260A260VgCcgTc22AY.930.000546
ORF1ab/nsp5A-B260A260delGCC---22B.1.10.000036
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.10.000653
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.2160.001781
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.2200.003717
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.1.2620.030303
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.1.2630.003115
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.2770.001517
ORF1ab/nsp5A-B260A260AgcCgcT12B.1.1.2840.000107
ORF1ab/nsp5A-B260A260AgcCgcA12B.1.1.2840.000107
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.1.2910.001485
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.3160.00185
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.3720.001377
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.1.3970.004505
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.4090.005666
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.4160.00181
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.4320.002532
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.4480.004065
ORF1ab/nsp5A-B260A260PGccCcc22B.1.1.70.000002
ORF1ab/nsp5A-B260A260del2gCCg--22B.1.1.70.000002
ORF1ab/nsp5A-B260A260del1Gcc-cc12B.1.1.70.000001
ORF1ab/nsp5A-B260A260del1gCcg-c12B.1.1.70.000001
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1.710.012121
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.1110.00235
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.160.90.014388
ORF1ab/nsp5A-B260A260del2GCc--c22B.1.1770.000026
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.177.380.020833
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.177.510.009132
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.177.600.000437
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.177.70.00033
ORF1ab/nsp5A-B260A260SGcCTcT12B.1.20.000009
ORF1ab/nsp5A-B260A260SGccTcc12B.1.20.000009
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.2400.000431
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.258.170.000208
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.3110.000549
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.3490.00143
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.36.170.000988
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.36.180.00084
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.36.290.001035
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.3770.009132
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.3980.005952
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.4000.000858
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.416.10.003125
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.4590.008163
ORF1ab/nsp5A-B260A260SGcCTcT12B.1.4730.019231
ORF1ab/nsp5A-B260A260SGccTcc12B.1.4730.019231
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.4990.002101
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.5240.002813
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.5610.000794
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.575.10.004878
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.5900.009091
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.6000.011696
ORF1ab/nsp5A-B260A260AgcCgcT22B.1.6090.000959
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.6090.000959
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.617.30.00597
ORF1ab/nsp5A-B260A260VgCcgTc22B.1.9.40.01227
ORF1ab/nsp5A-B260A260VgCcgTc22B.60.00182
ORF1ab/nsp5A-B260A260VgCcgTc22C.10.004785
ORF1ab/nsp5A-B260A260VgCcgTc22C.360.001821
ORF1ab/nsp5A-B260A260AgcCgcT22N.50.003534
ORF1ab/nsp5A-B260A260DgCcgAc22P.10.000032
ORF1ab/nsp5A-B260A260VgCcgTc22P.1.150.000465
ORF1ab/nsp5A-B260A260VgCcgTc22R.10.00018
ORF1ab/nsp5A-B260A260VgCcgTc22Z.10.00578
ORF1ab/nsp5A-B260A260GgCcgGc110.055556
ORF1ab/nsp5A-B260A260CGCcTGc110.055556
ORF1ab/nsp5A-B260A260del1Gcc-cc11A0.000387
ORF1ab/nsp5A-B260A260AgcCgcT11A.10.000282
ORF1ab/nsp5A-B260A260AgcCgcT11A.120.166667
ORF1ab/nsp5A-B260A260VgCcgTc11A.2.5.10.004808
ORF1ab/nsp5A-B260A260VgCcgTc11A.210.00277
ORF1ab/nsp5A-B260A260AgcCgcT11A.230.010526
ORF1ab/nsp5A-B260A260VgCcgTc11A.30.002096
ORF1ab/nsp5A-B260A260TGccAcc11A.50.001923
ORF1ab/nsp5A-B260A260EgCCgAA11All0
ORF1ab/nsp5A-B260A260CGCcTGc11All0
ORF1ab/nsp5A-B260A260SGccTcc11AT.10.005128
ORF1ab/nsp5A-B260A260AgcCgcA11AY.10.000396
ORF1ab/nsp5A-B260A260SGccTcc11AY.1000.000046
ORF1ab/nsp5A-B260A260AgcCgcT11AY.1010.00049
ORF1ab/nsp5A-B260A260VgCcgTc11AY.1040.001984
ORF1ab/nsp5A-B260A260TGccAcc11AY.1060.000335
ORF1ab/nsp5A-B260A260VgCcgTc11AY.1160.000287
ORF1ab/nsp5A-B260A260SGccTcc11AY.116.10.000311
ORF1ab/nsp5A-B260A260PGccCcc11AY.1200.000037
ORF1ab/nsp5A-B260A260TGccAcc11AY.1210.000135
ORF1ab/nsp5A-B260A260AgcCgcT11AY.1210.000135
ORF1ab/nsp5A-B260A260SGccTcc11AY.16.10.00047
ORF1ab/nsp5A-B260A260VgCcgTc11AY.210.001898
ORF1ab/nsp5A-B260A260VgCcgTc11AY.23.10.000417
ORF1ab/nsp5A-B260A260AgcCgcT11AY.23.10.000417
ORF1ab/nsp5A-B260A260AgcCgcT11AY.240.000431
ORF1ab/nsp5A-B260A260SGccTcc11AY.250.000006
ORF1ab/nsp5A-B260A260DgCcgAc11AY.250.000006
ORF1ab/nsp5A-B260A260delGCC---11AY.250.000006
ORF1ab/nsp5A-B260A260AgcCgcT11AY.3.10.000085
ORF1ab/nsp5A-B260A260AgcCgcT11AY.300.000396
ORF1ab/nsp5A-B260A260VgCcgTc11AY.300.000396
ORF1ab/nsp5A-B260A260VgCcgTc11AY.340.000097
ORF1ab/nsp5A-B260A260DgCcgAc11AY.340.000097
ORF1ab/nsp5A-B260A260AgcCgcT11AY.360.000148
ORF1ab/nsp5A-B260A260VgCcgTc11AY.380.000499
ORF1ab/nsp5A-B260A260SGccTcc11AY.390.000025
ORF1ab/nsp5A-B260A260GgCcgGc11AY.39.10.00004
ORF1ab/nsp5A-B260A260SGccTcc11AY.4.10.000737
ORF1ab/nsp5A-B260A260SGccTcc11AY.4.20.000022
ORF1ab/nsp5A-B260A260DgCcgAc11AY.4.20.000022
ORF1ab/nsp5A-B260A260AgcCgcT11AY.4.2.10.000149
ORF1ab/nsp5A-B260A260VgCcgTc11AY.4.50.000107
ORF1ab/nsp5A-B260A260AgcCgcT11AY.400.000964
ORF1ab/nsp5A-B260A260delGCC---11AY.430.000004
ORF1ab/nsp5A-B260A260delGCC---11AY.440.000006
ORF1ab/nsp5A-B260A260DgCcgAc11AY.450.000122
ORF1ab/nsp5A-B260A260VgCcgTc11AY.46.10.001027
ORF1ab/nsp5A-B260A260VgCcgTc11AY.46.20.000635
ORF1ab/nsp5A-B260A260AgcCgcT11AY.46.20.000635
ORF1ab/nsp5A-B260A260AgcCgcG11AY.46.60.000072
ORF1ab/nsp5A-B260A260AgcCgcT11AY.470.000031
ORF1ab/nsp5A-B260A260AgcCgcT11AY.5.30.000337
ORF1ab/nsp5A-B260A260AgcCgcT11AY.510.000909
ORF1ab/nsp5A-B260A260AgcCgcT11AY.530.000288
ORF1ab/nsp5A-B260A260delGCC---11AY.540.000095
ORF1ab/nsp5A-B260A260VgCcgTc11AY.550.000917
ORF1ab/nsp5A-B260A260VgCcgTc11AY.570.000656
ORF1ab/nsp5A-B260A260VgCcgTc11AY.590.00053
ORF1ab/nsp5A-B260A260AgcCgcT11AY.620.000436
ORF1ab/nsp5A-B260A260VgCcgTc11AY.630.000387
ORF1ab/nsp5A-B260A260VgCcgTc11AY.650.000533
ORF1ab/nsp5A-B260A260AgcCgcT11AY.650.000533
ORF1ab/nsp5A-B260A260TGccAcc11AY.670.000464
ORF1ab/nsp5A-B260A260delGCC---11AY.70.000196
ORF1ab/nsp5A-B260A260VgCcgTc11AY.70.000196
ORF1ab/nsp5A-B260A260VgCcgTc11AY.7.10.000113
ORF1ab/nsp5A-B260A260AgcCgcA11AY.710.000475
ORF1ab/nsp5A-B260A260TGccAcc11AY.750.000056
ORF1ab/nsp5A-B260A260AgcCgcT11AY.75.10.00018
ORF1ab/nsp5A-B260A260AgcCgcT11AY.780.001541
ORF1ab/nsp5A-B260A260VgCcgTc11AY.790.001211
ORF1ab/nsp5A-B260A260AgcCgcT11AY.850.000427
ORF1ab/nsp5A-B260A260AgcCgcT11AY.880.000884
ORF1ab/nsp5A-B260A260delGCC---11AY.90.000068
ORF1ab/nsp5A-B260A260PGcCCcA11AY.90.000068
ORF1ab/nsp5A-B260A260VgCcgTc11AY.9.20.000037
ORF1ab/nsp5A-B260A260VgCcgTc11AY.910.00073
ORF1ab/nsp5A-B260A260AgcCgcT11AY.99.10.001553
ORF1ab/nsp5A-B260A260AgcCgcT11AY.99.20.000092
ORF1ab/nsp5A-B260A260VgCcgTc11AZ.20.000821
ORF1ab/nsp5A-B260A260DgCcgAc11B.10.000009
ORF1ab/nsp5A-B260A260delGCC---11B.10.000009
ORF1ab/nsp5A-B260A260EgCCgAA11B.1.10.000018
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.10.000018
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.10.000327
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1010.01
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.1350.004695
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.1530.001095
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1530.001095
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1570.000913
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.1590.004673
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.1.1630.007634
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1740.003378
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.1760.000439
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1.1760.000439
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1810.004545
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.1980.001468
ORF1ab/nsp5A-B260A260SGccTcc11B.1.1.1980.001468
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2100.005714
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.2160.00089
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2170.003636
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2210.010101
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2260.005814
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2300.009174
ORF1ab/nsp5A-B260A260delGCC---11B.1.1.2320.001815
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2370.005405
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2430.004082
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.250.000569
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1.2650.003155
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.2690.001353
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.2770.000759
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.30.008696
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3030.002762
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3040.002809
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3060.000438
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1.3060.000438
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3080.011765
ORF1ab/nsp5A-B260A260delGCC---11B.1.1.3110.000358
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.3110.000358
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3120.001912
ORF1ab/nsp5A-B260A260SGccTcc11B.1.1.3160.000925
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.3190.017544
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.3440.010753
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.3480.000796
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.370.000193
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.390.00051
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.4130.006897
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.4170.002703
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.4200.001006
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.4670.019231
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.4870.005587
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.5070.008696
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1.5260.003546
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.630.000386
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.630.000386
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.670.004566
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.1.70.000001
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1.700.000341
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1.890.006061
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.110.30.000718
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1280.000635
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1390.000733
ORF1ab/nsp5A-B260A260SGccTcc11B.1.1600.000031
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.160.120.00641
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.160.160.000929
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.160.310.008065
ORF1ab/nsp5A-B260A260TGccAcc11B.1.1770.000013
ORF1ab/nsp5A-B260A260delGCC---11B.1.177.150.000631
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.150.000631
ORF1ab/nsp5A-B260A260delGCC---11B.1.177.160.000664
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.180.00116
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.230.003236
ORF1ab/nsp5A-B260A260delGCC---11B.1.177.40.000211
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.177.40.000211
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.530.002392
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.570.000281
ORF1ab/nsp5A-B260A260delGCC---11B.1.177.60.000977
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.177.60.000977
ORF1ab/nsp5A-B260A260AgcCgcA11B.1.177.720.00339
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.740.015152
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.177.810.000189
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.820.000477
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.177.870.000728
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.177.870.000728
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.1820.007246
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1920.009259
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.1990.004132
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.2150.009615
ORF1ab/nsp5A-B260A260SGccTcc11B.1.2210.000071
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.221.10.002907
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.2320.000537
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.2320.000537
ORF1ab/nsp5A-B260A260PGccCcc11B.1.2360.002053
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.2360.002053
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.2410.000812
ORF1ab/nsp5A-B260A260TGccAcc11B.1.2430.00007
ORF1ab/nsp5A-B260A260SGccTcc11B.1.2430.00007
ORF1ab/nsp5A-B260A260delGCC---11B.1.2580.000067
ORF1ab/nsp5A-B260A260GgCcgGc11B.1.2580.000067
ORF1ab/nsp5A-B260A260SGccTcc11B.1.258.170.000104
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.2790.000514
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3240.001605
ORF1ab/nsp5A-B260A260SGccTcc11B.1.3240.001605
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3290.000608
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3330.010526
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3400.004292
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.3460.001311
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3500.002933
ORF1ab/nsp5A-B260A260AgcCgcA11B.1.3560.001727
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.10.00114
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.160.001425
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.36.170.000494
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.180.00042
ORF1ab/nsp5A-B260A260delGCC---11B.1.36.180.00042
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.360.000602
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.380.001642
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.36.80.001
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.362.20.004717
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3670.000792
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.3690.000285
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3710.001122
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.3950.007042
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3960.000706
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.3980.002976
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.4040.001302
ORF1ab/nsp5A-B260A260AgcCgcA11B.1.4090.000781
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.4160.001269
ORF1ab/nsp5A-B260A260PGcCCcG11B.1.4290.000024
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.4330.003195
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.4380.006536
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.4410.009615
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.4480.002625
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.4560.003268
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.4730.019231
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5200.021739
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5230.002451
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5240.001406
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5250.000113
ORF1ab/nsp5A-B260A260TGccAcc11B.1.5260.000024
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.5390.017544
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5510.00129
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5640.000426
ORF1ab/nsp5A-B260A260AgcCgcG11B.1.564.10.001577
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.5680.001111
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5770.000687
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.5880.00091
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.5960.000087
ORF1ab/nsp5A-B260A260SGccTcc11B.1.5960.000087
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.617.10.000129
ORF1ab/nsp5A-B260A260DgCcgAc11B.1.617.20.000004
ORF1ab/nsp5A-B260A260TGccAcc11B.1.617.20.000004
ORF1ab/nsp5A-B260A260GgCcgGc11B.1.617.20.000004
ORF1ab/nsp5A-B260A260delGCC---11B.1.617.20.000004
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.6200.000946
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.621.10.000506
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.6230.000536
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.6250.002353
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.6260.005714
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.6270.00202
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.6280.000352
ORF1ab/nsp5A-B260A260AgcCgcG11B.1.6370.000073
ORF1ab/nsp5A-B260A260SGccTcc11B.1.6370.000073
ORF1ab/nsp5A-B260A260VgCcgTc11B.1.80.001972
ORF1ab/nsp5A-B260A260AgcCgcT11B.1.90.006173
ORF1ab/nsp5A-B260A260VgCcgTc11B.3.10.001658
ORF1ab/nsp5A-B260A260AgcCgcT11B.300.014706
ORF1ab/nsp5A-B260A260AgcCgcT11B.350.007812
ORF1ab/nsp5A-B260A260AgcCgcT11B.380.02381
ORF1ab/nsp5A-B260A260AgcCgcA11B.550.00295
ORF1ab/nsp5A-B260A260AgcCgcA11B.6.60.000889
ORF1ab/nsp5A-B260A260TGccAcc11B.610.005747
ORF1ab/nsp5A-B260A260VgCcgTc11C.110.010638
ORF1ab/nsp5A-B260A260AgcCgcT11C.160.00106
ORF1ab/nsp5A-B260A260VgCcgTc11C.170.055556
ORF1ab/nsp5A-B260A260VgCcgTc11C.330.058824
ORF1ab/nsp5A-B260A260VgCcgTc11C.340.037037
ORF1ab/nsp5A-B260A260SGccTcc11C.350.000774
ORF1ab/nsp5A-B260A260SGccTcc11D.20.000075
ORF1ab/nsp5A-B260A260AgcCgcT11D.30.005917
ORF1ab/nsp5A-B260A260AgcCgcT11L.10.001905
ORF1ab/nsp5A-B260A260VgCcgTc11L.30.003546
ORF1ab/nsp5A-B260A260delGCC---11N.40.004255
ORF1ab/nsp5A-B260A260VgCcgTc11N.40.004255
ORF1ab/nsp5A-B260A260AgcCgcT11N.90.005952
ORF1ab/nsp5A-B260A260GgCcgGc11P.10.000016
ORF1ab/nsp5A-B260A260TGccAcc11P.10.000016
ORF1ab/nsp5A-B260A260AgcCgcT11P.1.120.000484
ORF1ab/nsp5A-B260A260VgCcgTc11P.1.120.000484
ORF1ab/nsp5A-B260A260AgcCgcT11P.1.150.000232
ORF1ab/nsp5A-B260A260AgcCgcT11P.1.40.000977
ORF1ab/nsp5A-B260A260AgcCgcT11P.1.90.004808
ORF1ab/nsp5A-B260A260VgCcgTc11P.20.000187
ORF1ab/nsp5A-B260A260AgcCgcT11P.40.003802
ORF1ab/nsp5A-B260A260TGccAcc11Q.30.000145
ORF1ab/nsp5A-B260A260TGccAcc11R.10.00009
ORF1ab/nsp5A-B260A260AgcCgcT11W.20.004831
ORF1ab/nsp5A-B260A260AgcCgcT11W.30.005263