CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 251

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B251G251RG3514RnonsynGgaAga1751690.96571410805-10807
ORF1ab/nsp5A-B251G251RG3514RnonsynGgaCga17560.034285710805-10807
ORF1ab/nsp5A-B251G251GG3514GsynggAggG61520.85245910805-10807
ORF1ab/nsp5A-B251G251GG3514GsynggAggC6150.081967210805-10807
ORF1ab/nsp5A-B251G251GG3514GsynggAggT6140.065573810805-10807
ORF1ab/nsp5A-B251G251delG3514deldelGGA---4848110805-10807
ORF1ab/nsp5A-B251G251EG3514EnonsyngGagAa2727110805-10807
ORF1ab/nsp5A-B251G251VG3514VnonsyngGagTa1919110805-10807
ORF1ab/nsp5A-B251G251XG3514XnonsynGgaTga15140.93333310805-10807
ORF1ab/nsp5A-B251G251XG3514XnonsynGGaTAa1510.066666710805-10807
ORF1ab/nsp5A-B251G251del1G3514del1delGga-ga540.810805-10807
ORF1ab/nsp5A-B251G251del1G3514del1delgGAgA-510.210805-10807
ORF1ab/nsp5A-B251G251DG3514DnonsyngGAgAC33110805-10807
ORF1ab/nsp5A-B251G251AG3514AnonsyngGagCa33110805-10807
ORF1ab/nsp5A-B251G251LG3514LnonsynGGaTTa22110805-10807
ORF1ab/nsp5A-B251G251KG3514KnonsynGGAAAG22110805-10807
ORF1ab/nsp5A-B251G251MG3514MnonsynGGAATG11110805-10807

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B251G251RGgaAga169175All0.000032
ORF1ab/nsp5A-B251G251RGgaCga6175All0.000001
ORF1ab/nsp5A-B251G251GggAggG5261All0.00001
ORF1ab/nsp5A-B251G251GggAggC561All0.000001
ORF1ab/nsp5A-B251G251GggAggT461All0.000001
ORF1ab/nsp5A-B251G251delGGA---4848All0.000009
ORF1ab/nsp5A-B251G251EgGagAa2727All0.000005
ORF1ab/nsp5A-B251G251VgGagTa1919All0.000004
ORF1ab/nsp5A-B251G251delGGA---1818B.1.1.70.000016
ORF1ab/nsp5A-B251G251RGgaAga1718B.1.1.70.000015
ORF1ab/nsp5A-B251G251RGgaCga118B.1.1.70.000001
ORF1ab/nsp5A-B251G251RGgaAga1616AY.440.000097
ORF1ab/nsp5A-B251G251XGgaTga1415All0.000003
ORF1ab/nsp5A-B251G251XGGaTAa115All0
ORF1ab/nsp5A-B251G251RGgaAga1515B.1.617.20.000056
ORF1ab/nsp5A-B251G251RGgaAga1414AY.1020.000371
ORF1ab/nsp5A-B251G251RGgaAga1314AY.40.00002
ORF1ab/nsp5A-B251G251RGgaCga114AY.40.000002
ORF1ab/nsp5A-B251G251RGgaAga1313AY.98.10.00063
ORF1ab/nsp5A-B251G251GggAggG1112B.1.1.70.00001
ORF1ab/nsp5A-B251G251GggAggC112B.1.1.70.000001
ORF1ab/nsp5A-B251G251RGgaAga88AY.1030.00005
ORF1ab/nsp5A-B251G251GggAggG68B.1.1770.000079
ORF1ab/nsp5A-B251G251GggAggT18B.1.1770.000013
ORF1ab/nsp5A-B251G251GggAggC18B.1.1770.000013
ORF1ab/nsp5A-B251G251GggAggG67AY.40.000009
ORF1ab/nsp5A-B251G251GggAggT17AY.40.000002
ORF1ab/nsp5A-B251G251RGgaAga77B.1.1.2220.001428
ORF1ab/nsp5A-B251G251RGgaAga77B.1.4290.000165
ORF1ab/nsp5A-B251G251del1Gga-ga45All0.000001
ORF1ab/nsp5A-B251G251del1gGAgA-15All0
ORF1ab/nsp5A-B251G251RGgaAga55AY.430.000022
ORF1ab/nsp5A-B251G251GggAggG55AY.50.000103
ORF1ab/nsp5A-B251G251RGgaAga55B.10.000046
ORF1ab/nsp5A-B251G251RGgaAga55B.1.10.000091
ORF1ab/nsp5A-B251G251delGGA---440.222222
ORF1ab/nsp5A-B251G251RGgaAga44AY.390.000099
ORF1ab/nsp5A-B251G251VgGagTa44AY.40.000006
ORF1ab/nsp5A-B251G251GggAggG44AY.60.000165
ORF1ab/nsp5A-B251G251RGgaAga34B.1.20.000026
ORF1ab/nsp5A-B251G251RGgaCga14B.1.20.000009
ORF1ab/nsp5A-B251G251DgGAgAC33All0.000001
ORF1ab/nsp5A-B251G251AgGagCa33All0.000001
ORF1ab/nsp5A-B251G251GggAggG33AY.1030.000019
ORF1ab/nsp5A-B251G251RGgaAga33AY.1210.000406
ORF1ab/nsp5A-B251G251RGgaAga33AY.290.000047
ORF1ab/nsp5A-B251G251EgGagAa33AY.40.000005
ORF1ab/nsp5A-B251G251delGGA---33AY.4.50.000322
ORF1ab/nsp5A-B251G251XGgaTga23B.10.000018
ORF1ab/nsp5A-B251G251XGGaTAa13B.10.000009
ORF1ab/nsp5A-B251G251XGgaTga33B.1.10.000054
ORF1ab/nsp5A-B251G251VgGagTa33B.1.1.70.000003
ORF1ab/nsp5A-B251G251XGgaTga33B.1.1.70.000003
ORF1ab/nsp5A-B251G251EgGagAa33B.1.1.70.000003
ORF1ab/nsp5A-B251G251EgGagAa33B.1.1.930.076923
ORF1ab/nsp5A-B251G251RGgaAga33B.1.110.20.5
ORF1ab/nsp5A-B251G251EgGagAa33B.1.4290.000071
ORF1ab/nsp5A-B251G251LGGaTTa22All0
ORF1ab/nsp5A-B251G251KGGAAAG22All0
ORF1ab/nsp5A-B251G251RGgaAga22AY.1190.000071
ORF1ab/nsp5A-B251G251GggAggG22AY.250.000012
ORF1ab/nsp5A-B251G251RGgaAga22AY.250.000012
ORF1ab/nsp5A-B251G251VgGagTa22AY.30.00002
ORF1ab/nsp5A-B251G251EgGagAa22AY.30.00002
ORF1ab/nsp5A-B251G251RGgaAga22AY.39.10.000079
ORF1ab/nsp5A-B251G251delGGA---22AY.40.000003
ORF1ab/nsp5A-B251G251RGgaAga22AY.4.20.000043
ORF1ab/nsp5A-B251G251delGGA---22AY.430.000009
ORF1ab/nsp5A-B251G251GggAggG12AY.430.000004
ORF1ab/nsp5A-B251G251GggAggT12AY.430.000004
ORF1ab/nsp5A-B251G251GggAggG22AY.5.30.000675
ORF1ab/nsp5A-B251G251delGGA---22AY.90.000135
ORF1ab/nsp5A-B251G251VgGagTa22B.10.000018
ORF1ab/nsp5A-B251G251EgGagAa22B.10.000018
ORF1ab/nsp5A-B251G251EgGagAa22B.1.10.000036
ORF1ab/nsp5A-B251G251VgGagTa22B.1.10.000036
ORF1ab/nsp5A-B251G251GggAggC22B.1.1.3160.00185
ORF1ab/nsp5A-B251G251RGgaAga22B.1.1600.000062
ORF1ab/nsp5A-B251G251EgGagAa22B.1.3510.000059
ORF1ab/nsp5A-B251G251GggAggG22B.1.4270.000101
ORF1ab/nsp5A-B251G251RGgaAga22B.1.5960.000174
ORF1ab/nsp5A-B251G251del1gGAgA-12B.1.617.20.000004
ORF1ab/nsp5A-B251G251del1Gga-ga12B.1.617.20.000004
ORF1ab/nsp5A-B251G251EgGagAa11A.20.000662
ORF1ab/nsp5A-B251G251GggAggG11AE.50.018519
ORF1ab/nsp5A-B251G251MGGAATG11All0
ORF1ab/nsp5A-B251G251RGgaAga11AY.1000.000046
ORF1ab/nsp5A-B251G251EgGagAa11AY.1030.000006
ORF1ab/nsp5A-B251G251DgGAgAC11AY.1030.000006
ORF1ab/nsp5A-B251G251VgGagTa11AY.1060.000335
ORF1ab/nsp5A-B251G251GggAggG11AY.1080.001103
ORF1ab/nsp5A-B251G251RGgaAga11AY.1130.000142
ORF1ab/nsp5A-B251G251AgGagCa11AY.1170.000085
ORF1ab/nsp5A-B251G251AgGagCa11AY.1190.000035
ORF1ab/nsp5A-B251G251GggAggG11AY.1200.000037
ORF1ab/nsp5A-B251G251GggAggG11AY.160.00038
ORF1ab/nsp5A-B251G251XGgaTga11AY.250.000006
ORF1ab/nsp5A-B251G251delGGA---11AY.250.000006
ORF1ab/nsp5A-B251G251RGgaCga11AY.260.000028
ORF1ab/nsp5A-B251G251AgGagCa11AY.30.00001
ORF1ab/nsp5A-B251G251RGgaAga11AY.30.00001
ORF1ab/nsp5A-B251G251delGGA---11AY.360.000148
ORF1ab/nsp5A-B251G251VgGagTa11AY.390.000025
ORF1ab/nsp5A-B251G251MGGAATG11AY.440.000006
ORF1ab/nsp5A-B251G251del1Gga-ga11AY.440.000006
ORF1ab/nsp5A-B251G251delGGA---11AY.440.000006
ORF1ab/nsp5A-B251G251VgGagTa11AY.470.000031
ORF1ab/nsp5A-B251G251GggAggG11AY.530.000288
ORF1ab/nsp5A-B251G251delGGA---11AY.540.000095
ORF1ab/nsp5A-B251G251delGGA---11AY.60.000041
ORF1ab/nsp5A-B251G251EgGagAa11AY.750.000056
ORF1ab/nsp5A-B251G251del1Gga-ga11AY.810.001992
ORF1ab/nsp5A-B251G251RGgaAga11AY.980.000079
ORF1ab/nsp5A-B251G251GggAggG11AY.980.000079
ORF1ab/nsp5A-B251G251delGGA---11B0.000128
ORF1ab/nsp5A-B251G251delGGA---11B.10.000009
ORF1ab/nsp5A-B251G251del1Gga-ga11B.10.000009
ORF1ab/nsp5A-B251G251GggAggT11B.10.000009
ORF1ab/nsp5A-B251G251KGGAAAG11B.1.10.000018
ORF1ab/nsp5A-B251G251delGGA---11B.1.10.000018
ORF1ab/nsp5A-B251G251RGgaAga11B.1.1.2140.000055
ORF1ab/nsp5A-B251G251GggAggG11B.1.1.250.000569
ORF1ab/nsp5A-B251G251RGgaAga11B.1.1.2840.000107
ORF1ab/nsp5A-B251G251delGGA---11B.1.1.3110.000358
ORF1ab/nsp5A-B251G251GggAggG11B.1.1.4320.001266
ORF1ab/nsp5A-B251G251DgGAgAC11B.1.1.70.000001
ORF1ab/nsp5A-B251G251XGgaTga11B.1.1050.009615
ORF1ab/nsp5A-B251G251EgGagAa11B.1.1280.000635
ORF1ab/nsp5A-B251G251VgGagTa11B.1.1770.000013
ORF1ab/nsp5A-B251G251delGGA---11B.1.1770.000013
ORF1ab/nsp5A-B251G251delGGA---11B.1.177.160.000664
ORF1ab/nsp5A-B251G251delGGA---11B.1.177.40.000211
ORF1ab/nsp5A-B251G251EgGagAa11B.1.177.860.000183
ORF1ab/nsp5A-B251G251delGGA---11B.1.177.870.000728
ORF1ab/nsp5A-B251G251RGgaCga11B.1.2210.000071
ORF1ab/nsp5A-B251G251RGgaAga11B.1.2340.000132
ORF1ab/nsp5A-B251G251RGgaAga11B.1.2430.00007
ORF1ab/nsp5A-B251G251delGGA---11B.1.2580.000067
ORF1ab/nsp5A-B251G251GggAggG11B.1.258.140.00098
ORF1ab/nsp5A-B251G251EgGagAa11B.1.3240.001605
ORF1ab/nsp5A-B251G251LGGaTTa11B.1.351.30.000876
ORF1ab/nsp5A-B251G251RGgaAga11B.1.360.000146
ORF1ab/nsp5A-B251G251GggAggG11B.1.36.290.000517
ORF1ab/nsp5A-B251G251XGgaTga11B.1.438.10.000107
ORF1ab/nsp5A-B251G251RGgaAga11B.1.5250.000113
ORF1ab/nsp5A-B251G251EgGagAa11B.1.5260.000024
ORF1ab/nsp5A-B251G251RGgaAga11B.1.5800.004065
ORF1ab/nsp5A-B251G251RGgaCga11B.1.5900.004545
ORF1ab/nsp5A-B251G251XGgaTga11B.1.617.20.000004
ORF1ab/nsp5A-B251G251VgGagTa11B.1.617.20.000004
ORF1ab/nsp5A-B251G251delGGA---11B.1.617.20.000004
ORF1ab/nsp5A-B251G251KGGAAAG11B.1.617.20.000004
ORF1ab/nsp5A-B251G251DgGAgAC11B.1.617.20.000004
ORF1ab/nsp5A-B251G251RGgaAga11B.1.6210.000089
ORF1ab/nsp5A-B251G251RGgaAga11B.1.6370.000073
ORF1ab/nsp5A-B251G251XGgaTga11B.280.003279
ORF1ab/nsp5A-B251G251delGGA---11B.550.00295
ORF1ab/nsp5A-B251G251XGgaTga11D.20.000075
ORF1ab/nsp5A-B251G251RGgaAga11D.20.000075
ORF1ab/nsp5A-B251G251GggAggC11D.20.000075
ORF1ab/nsp5A-B251G251VgGagTa11D.20.000075
ORF1ab/nsp5A-B251G251delGGA---11N.40.004255
ORF1ab/nsp5A-B251G251RGgaAga11P.1.140.000048
ORF1ab/nsp5A-B251G251RGgaAga11P.1.170.000162
ORF1ab/nsp5A-B251G251LGGaTTa11P.1.70.000319