CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 241 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B241P241HP3504HnonsyncCtcAt585585110775-10777

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B241P241HcCtcAt585585All0.000112
ORF1ab/nsp5A-B241P241HcCtcAt315315B.1.1.3510.879888
ORF1ab/nsp5A-B241P241HcCtcAt9898B.1.1.70.000088
ORF1ab/nsp5A-B241P241HcCtcAt2525B.1.10.000454
ORF1ab/nsp5A-B241P241HcCtcAt1919AY.9.20.000698
ORF1ab/nsp5A-B241P241HcCtcAt1717AY.40.000026
ORF1ab/nsp5A-B241P241HcCtcAt1414AY.440.000085
ORF1ab/nsp5A-B241P241HcCtcAt1313B.10.000119
ORF1ab/nsp5A-B241P241HcCtcAt1212AY.5.40.00332
ORF1ab/nsp5A-B241P241HcCtcAt99P.10.000142
ORF1ab/nsp5A-B241P241HcCtcAt88B.1.1420.023188
ORF1ab/nsp5A-B241P241HcCtcAt66B.1.617.20.000023
ORF1ab/nsp5A-B241P241HcCtcAt44AY.1020.000106
ORF1ab/nsp5A-B241P241HcCtcAt44AY.430.000018
ORF1ab/nsp5A-B241P241HcCtcAt44B.1.6210.000354
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.5250.000339
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.6270.006061
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.910.006224
ORF1ab/nsp5A-B241P241HcCtcAt220.111111
ORF1ab/nsp5A-B241P241HcCtcAt22AY.1170.000169
ORF1ab/nsp5A-B241P241HcCtcAt22AY.30.00002
ORF1ab/nsp5A-B241P241HcCtcAt22AY.380.000999
ORF1ab/nsp5A-B241P241HcCtcAt22B.1.1.2370.010811
ORF1ab/nsp5A-B241P241HcCtcAt11AY.1030.000006
ORF1ab/nsp5A-B241P241HcCtcAt11AY.1130.000142
ORF1ab/nsp5A-B241P241HcCtcAt11AY.230.00007
ORF1ab/nsp5A-B241P241HcCtcAt11AY.250.000006
ORF1ab/nsp5A-B241P241HcCtcAt11AY.390.000025
ORF1ab/nsp5A-B241P241HcCtcAt11AY.420.00004
ORF1ab/nsp5A-B241P241HcCtcAt11AY.5.10.003759
ORF1ab/nsp5A-B241P241HcCtcAt11AY.75.10.00018
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.1480.008772
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.3980.003226
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.5190.00004
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1390.000733
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.20.000009
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.2320.000537
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.258.120.007874
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.3510.00003
ORF1ab/nsp5A-B241P241HcCtcAt11C.370.000116
ORF1ab/nsp5A-B241P241HcCtcAt11Q.80.000165