CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 241

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B241P241SP3504SnonsynCctTct435043480.9995410775-10777
ORF1ab/nsp5A-B241P241SP3504SnonsynCcTTcA435010.00022988510775-10777
ORF1ab/nsp5A-B241P241SP3504SnonsynCcTTcC435010.00022988510775-10777
ORF1ab/nsp5A-B241P241LP3504LnonsyncCtcTt357535730.99944110775-10777
ORF1ab/nsp5A-B241P241LP3504LnonsyncCTcTC357520.00055944110775-10777
ORF1ab/nsp5A-B241P241HP3504HnonsyncCtcAt585585110775-10777
ORF1ab/nsp5A-B241P241PP3504PsynccTccC2821780.63120610775-10777
ORF1ab/nsp5A-B241P241PP3504PsynccTccA282720.25531910775-10777
ORF1ab/nsp5A-B241P241PP3504PsynccTccG282320.11347510775-10777
ORF1ab/nsp5A-B241P241TP3504TnonsynCctAct61590.96721310775-10777
ORF1ab/nsp5A-B241P241TP3504TnonsynCcTAcC6120.032786910775-10777
ORF1ab/nsp5A-B241P241delP3504deldelCCT---4949110775-10777
ORF1ab/nsp5A-B241P241del2P3504del2delcCTc--44110775-10777
ORF1ab/nsp5A-B241P241RP3504RnonsyncCtcGt33110775-10777
ORF1ab/nsp5A-B241P241del1P3504del1delccTcc-22110775-10777
ORF1ab/nsp5A-B241P241VP3504VnonsynCCTGTG22110775-10777
ORF1ab/nsp5A-B241P241CP3504CnonsynCCtTGt11110775-10777
ORF1ab/nsp5A-B241P241WP3504WnonsynCCTTGG11110775-10777

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B241P241SCctTct43484350All0.000832
ORF1ab/nsp5A-B241P241SCcTTcA14350All0
ORF1ab/nsp5A-B241P241SCcTTcC14350All0
ORF1ab/nsp5A-B241P241LcCtcTt35733575All0.000683
ORF1ab/nsp5A-B241P241LcCTcTC23575All0
ORF1ab/nsp5A-B241P241SCctTct32673267B.1.5260.076789
ORF1ab/nsp5A-B241P241LcCtcTt17491749B.1.1.70.001566
ORF1ab/nsp5A-B241P241HcCtcAt585585All0.000112
ORF1ab/nsp5A-B241P241SCctTct424424B.1.6250.997647
ORF1ab/nsp5A-B241P241LcCtcTt333333P.1.70.106322
ORF1ab/nsp5A-B241P241HcCtcAt315315B.1.1.3510.879888
ORF1ab/nsp5A-B241P241LcCtcTt298298P.10.004695
ORF1ab/nsp5A-B241P241PccTccC178282All0.000034
ORF1ab/nsp5A-B241P241PccTccA72282All0.000014
ORF1ab/nsp5A-B241P241PccTccG32282All0.000006
ORF1ab/nsp5A-B241P241SCctTct225225B.1.1.70.000201
ORF1ab/nsp5A-B241P241LcCtcTt121121AY.590.064089
ORF1ab/nsp5A-B241P241LcCtcTt115115B.1.3510.003419
ORF1ab/nsp5A-B241P241HcCtcAt9898B.1.1.70.000088
ORF1ab/nsp5A-B241P241LcCtcTt6666AY.1030.00041
ORF1ab/nsp5A-B241P241TCctAct5961All0.000011
ORF1ab/nsp5A-B241P241TCcTAcC261All0
ORF1ab/nsp5A-B241P241SCctTct5555AY.40.000086
ORF1ab/nsp5A-B241P241PccTccA4154AY.430.000182
ORF1ab/nsp5A-B241P241PccTccC954AY.430.00004
ORF1ab/nsp5A-B241P241PccTccG454AY.430.000018
ORF1ab/nsp5A-B241P241LcCtcTt5353B.1.20.000467
ORF1ab/nsp5A-B241P241LcCtcTt5252B.1.258.170.005407
ORF1ab/nsp5A-B241P241delCCT---4949All0.000009
ORF1ab/nsp5A-B241P241LcCtcTt4848B.10.00044
ORF1ab/nsp5A-B241P241LcCtcTt4040AY.200.001555
ORF1ab/nsp5A-B241P241SCctTct3838B.1.10.000689
ORF1ab/nsp5A-B241P241LcCtcTt3737B.1.617.20.000139
ORF1ab/nsp5A-B241P241LcCtcTt3636AY.99.20.003318
ORF1ab/nsp5A-B241P241LcCtcTt3535AY.40.000054
ORF1ab/nsp5A-B241P241SCctTct3535B.1.617.20.000132
ORF1ab/nsp5A-B241P241PccTccC3434B.1.4290.0008
ORF1ab/nsp5A-B241P241PccTccC3232B.1.20.000282
ORF1ab/nsp5A-B241P241LcCtcTt3031AY.440.000183
ORF1ab/nsp5A-B241P241LcCTcTC131AY.440.000006
ORF1ab/nsp5A-B241P241LcCtcTt2828B.1.4270.001414
ORF1ab/nsp5A-B241P241LcCtcTt2828B.1.5260.000658
ORF1ab/nsp5A-B241P241SCctTct2627B.10.000238
ORF1ab/nsp5A-B241P241SCcTTcC127B.10.000009
ORF1ab/nsp5A-B241P241LcCtcTt2727C.370.003134
ORF1ab/nsp5A-B241P241HcCtcAt2525B.1.10.000454
ORF1ab/nsp5A-B241P241SCctTct2525B.1.4970.007869
ORF1ab/nsp5A-B241P241LcCtcTt2323B.1.596.10.214953
ORF1ab/nsp5A-B241P241SCctTct2122AY.430.000093
ORF1ab/nsp5A-B241P241SCcTTcA122AY.430.000004
ORF1ab/nsp5A-B241P241LcCtcTt2222B.1.10.000399
ORF1ab/nsp5A-B241P241LcCtcTt2121B.1.5250.002376
ORF1ab/nsp5A-B241P241HcCtcAt1919AY.9.20.000698
ORF1ab/nsp5A-B241P241PccTccC1818AY.260.00051
ORF1ab/nsp5A-B241P241SCctTct1717AY.1030.000106
ORF1ab/nsp5A-B241P241HcCtcAt1717AY.40.000026
ORF1ab/nsp5A-B241P241PccTccA917AY.40.000014
ORF1ab/nsp5A-B241P241PccTccG617AY.40.000009
ORF1ab/nsp5A-B241P241PccTccC217AY.40.000003
ORF1ab/nsp5A-B241P241delCCT---1616B.1.1.70.000014
ORF1ab/nsp5A-B241P241LcCtcTt1616P.1.140.000765
ORF1ab/nsp5A-B241P241LcCtcTt1515AY.420.000603
ORF1ab/nsp5A-B241P241PccTccC1015B.1.1.70.000009
ORF1ab/nsp5A-B241P241PccTccA415B.1.1.70.000004
ORF1ab/nsp5A-B241P241PccTccG115B.1.1.70.000001
ORF1ab/nsp5A-B241P241LcCtcTt1414AY.430.000062
ORF1ab/nsp5A-B241P241HcCtcAt1414AY.440.000085
ORF1ab/nsp5A-B241P241HcCtcAt1313B.10.000119
ORF1ab/nsp5A-B241P241SCctTct1313B.1.20.000114
ORF1ab/nsp5A-B241P241LcCtcTt1212AY.130.001932
ORF1ab/nsp5A-B241P241SCctTct1212AY.250.000072
ORF1ab/nsp5A-B241P241LcCtcTt1212AY.260.00034
ORF1ab/nsp5A-B241P241HcCtcAt1212AY.5.40.00332
ORF1ab/nsp5A-B241P241SCctTct1212P.10.000189
ORF1ab/nsp5A-B241P241PccTccC1011AY.1030.000062
ORF1ab/nsp5A-B241P241PccTccG111AY.1030.000006
ORF1ab/nsp5A-B241P241PccTccG1111AY.370.003477
ORF1ab/nsp5A-B241P241SCctTct1111AY.440.000067
ORF1ab/nsp5A-B241P241LcCtcTt1111B.1.5510.014194
ORF1ab/nsp5A-B241P241PccTccC1111P.10.000173
ORF1ab/nsp5A-B241P241LcCtcTt1111P.1.150.002556
ORF1ab/nsp5A-B241P241LcCtcTt1010AY.250.00006
ORF1ab/nsp5A-B241P241TCctAct1010AY.40.000016
ORF1ab/nsp5A-B241P241PccTccA1010AY.540.000953
ORF1ab/nsp5A-B241P241LcCtcTt1010B.1.2580.000665
ORF1ab/nsp5A-B241P241LcCtcTt99AY.240.003879
ORF1ab/nsp5A-B241P241LcCtcTt99AY.450.001095
ORF1ab/nsp5A-B241P241SCctTct99B.1.2580.000599
ORF1ab/nsp5A-B241P241LcCtcTt99B.1.258.240.096774
ORF1ab/nsp5A-B241P241LcCtcTt99B.1.4290.000212
ORF1ab/nsp5A-B241P241HcCtcAt99P.10.000142
ORF1ab/nsp5A-B241P241LcCtcTt99P.1.120.004356
ORF1ab/nsp5A-B241P241LcCtcTt88AY.470.000249
ORF1ab/nsp5A-B241P241HcCtcAt88B.1.1420.023188
ORF1ab/nsp5A-B241P241LcCtcTt88B.1.1770.000105
ORF1ab/nsp5A-B241P241LcCtcTt88B.1.6370.000585
ORF1ab/nsp5A-B241P241TCctAct77AY.46.40.001152
ORF1ab/nsp5A-B241P241LcCtcTt77B.1.3690.001997
ORF1ab/nsp5A-B241P241LcCtcTt77P.1.170.001132
ORF1ab/nsp5A-B241P241LcCtcTt77Q.30.001015
ORF1ab/nsp5A-B241P241LcCtcTt77Q.80.001154
ORF1ab/nsp5A-B241P241LcCtcTt66AY.1020.000159
ORF1ab/nsp5A-B241P241SCctTct66AY.30.00006
ORF1ab/nsp5A-B241P241SCctTct66B.1.1280.003812
ORF1ab/nsp5A-B241P241SCctTct66B.1.2140.021978
ORF1ab/nsp5A-B241P241SCctTct66B.1.3510.000178
ORF1ab/nsp5A-B241P241SCctTct66B.1.360.000875
ORF1ab/nsp5A-B241P241SCctTct66B.1.4270.000303
ORF1ab/nsp5A-B241P241HcCtcAt66B.1.617.20.000023
ORF1ab/nsp5A-B241P241PccTccC56B.1.617.20.000019
ORF1ab/nsp5A-B241P241PccTccG16B.1.617.20.000004
ORF1ab/nsp5A-B241P241LcCtcTt66P.1.160.002245
ORF1ab/nsp5A-B241P241LcCtcTt66Q.40.002729
ORF1ab/nsp5A-B241P241LcCtcTt55A.10.001409
ORF1ab/nsp5A-B241P241LcCtcTt55AY.1110.000916
ORF1ab/nsp5A-B241P241SCctTct55AY.230.000349
ORF1ab/nsp5A-B241P241LcCtcTt55AY.30.00005
ORF1ab/nsp5A-B241P241LcCtcTt55AY.390.000124
ORF1ab/nsp5A-B241P241SCctTct55AY.4.20.000108
ORF1ab/nsp5A-B241P241LcCtcTt55AY.9.20.000184
ORF1ab/nsp5A-B241P241PccTccC55B.10.000046
ORF1ab/nsp5A-B241P241LcCtcTt55B.1.177.70.000824
ORF1ab/nsp5A-B241P241SCctTct55B.1.4290.000118
ORF1ab/nsp5A-B241P241LcCtcTt55B.1.5960.000436
ORF1ab/nsp5A-B241P241SCctTct55D.20.000375
ORF1ab/nsp5A-B241P241del2cCTc--44All0.000001
ORF1ab/nsp5A-B241P241LcCtcTt44AY.1000.000184
ORF1ab/nsp5A-B241P241HcCtcAt44AY.1020.000106
ORF1ab/nsp5A-B241P241SCctTct44AY.390.000099
ORF1ab/nsp5A-B241P241HcCtcAt44AY.430.000018
ORF1ab/nsp5A-B241P241TCctAct34AY.440.000018
ORF1ab/nsp5A-B241P241TCcTAcC14AY.440.000006
ORF1ab/nsp5A-B241P241LcCtcTt44AY.50.000083
ORF1ab/nsp5A-B241P241SCctTct44AY.7.10.000451
ORF1ab/nsp5A-B241P241PccTccC44AY.99.20.000369
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.1.5190.000159
ORF1ab/nsp5A-B241P241TCctAct44B.1.1.70.000004
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.243.10.088889
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.36.380.006568
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.619.10.002566
ORF1ab/nsp5A-B241P241HcCtcAt44B.1.6210.000354
ORF1ab/nsp5A-B241P241LcCtcTt44B.1.6270.008081
ORF1ab/nsp5A-B241P241TCctAct44B.390.009324
ORF1ab/nsp5A-B241P241TCctAct44P.10.000063
ORF1ab/nsp5A-B241P241SCctTct44P.1.140.000191
ORF1ab/nsp5A-B241P241LcCtcTt33A.270.004967
ORF1ab/nsp5A-B241P241RcCtcGt33All0.000001
ORF1ab/nsp5A-B241P241PccTccG33AY.1130.000427
ORF1ab/nsp5A-B241P241LcCtcTt33AY.1190.000106
ORF1ab/nsp5A-B241P241LcCtcTt33AY.1200.000112
ORF1ab/nsp5A-B241P241TCctAct33AY.200.000117
ORF1ab/nsp5A-B241P241LcCtcTt33AY.290.000047
ORF1ab/nsp5A-B241P241LcCtcTt33AY.330.0002
ORF1ab/nsp5A-B241P241delCCT---33AY.40.000005
ORF1ab/nsp5A-B241P241PccTccC23AY.440.000012
ORF1ab/nsp5A-B241P241PccTccA13AY.440.000006
ORF1ab/nsp5A-B241P241LcCtcTt33AY.610.000314
ORF1ab/nsp5A-B241P241LcCtcTt33AY.740.000347
ORF1ab/nsp5A-B241P241LcCtcTt33AY.950.002283
ORF1ab/nsp5A-B241P241delCCT---33B.1.10.000054
ORF1ab/nsp5A-B241P241PccTccC23B.1.10.000036
ORF1ab/nsp5A-B241P241PccTccA13B.1.10.000018
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.1.280.000934
ORF1ab/nsp5A-B241P241SCctTct33B.1.351.20.000908
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.36.290.001552
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.36.310.005254
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.5250.000339
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.617.10.000387
ORF1ab/nsp5A-B241P241LcCtcTt33B.1.6210.000266
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.6270.006061
ORF1ab/nsp5A-B241P241HcCtcAt33B.1.910.006224
ORF1ab/nsp5A-B241P241TCctAct33C.370.000348
ORF1ab/nsp5A-B241P241SCctTct33N.40.012766
ORF1ab/nsp5A-B241P241SCctTct33P.1.130.002695
ORF1ab/nsp5A-B241P241TCctAct33P.1.40.00293
ORF1ab/nsp5A-B241P241LcCtcTt33Q.70.003333
ORF1ab/nsp5A-B241P241SCctTct33Q.80.000495
ORF1ab/nsp5A-B241P241VCCTGTG220.111111
ORF1ab/nsp5A-B241P241delCCT---220.111111
ORF1ab/nsp5A-B241P241HcCtcAt220.111111
ORF1ab/nsp5A-B241P241LcCtcTt22A.2.50.000998
ORF1ab/nsp5A-B241P241del1ccTcc-22All0
ORF1ab/nsp5A-B241P241VCCTGTG22All0
ORF1ab/nsp5A-B241P241SCctTct22AY.1000.000092
ORF1ab/nsp5A-B241P241LcCtcTt22AY.1010.000981
ORF1ab/nsp5A-B241P241HcCtcAt22AY.1170.000169
ORF1ab/nsp5A-B241P241SCctTct22AY.1190.000071
ORF1ab/nsp5A-B241P241TCctAct22AY.1190.000071
ORF1ab/nsp5A-B241P241PccTccC22AY.1200.000074
ORF1ab/nsp5A-B241P241SCctTct22AY.140.000176
ORF1ab/nsp5A-B241P241SCctTct22AY.200.000078
ORF1ab/nsp5A-B241P241LcCtcTt22AY.230.000139
ORF1ab/nsp5A-B241P241TCctAct22AY.250.000012
ORF1ab/nsp5A-B241P241SCctTct22AY.260.000057
ORF1ab/nsp5A-B241P241SCctTct22AY.270.000129
ORF1ab/nsp5A-B241P241HcCtcAt22AY.30.00002
ORF1ab/nsp5A-B241P241PccTccA12AY.30.00001
ORF1ab/nsp5A-B241P241PccTccC12AY.30.00001
ORF1ab/nsp5A-B241P241delCCT---22AY.360.000296
ORF1ab/nsp5A-B241P241HcCtcAt22AY.380.000999
ORF1ab/nsp5A-B241P241delCCT---22AY.4.50.000215
ORF1ab/nsp5A-B241P241SCctTct22AY.450.000243
ORF1ab/nsp5A-B241P241PccTccC22AY.470.000062
ORF1ab/nsp5A-B241P241SCctTct22AY.470.000062
ORF1ab/nsp5A-B241P241PccTccA12AY.50.000021
ORF1ab/nsp5A-B241P241PccTccC12AY.50.000021
ORF1ab/nsp5A-B241P241LcCtcTt22AY.5.40.000553
ORF1ab/nsp5A-B241P241SCctTct22AY.510.001818
ORF1ab/nsp5A-B241P241delCCT---22AY.90.000135
ORF1ab/nsp5A-B241P241SCctTct22AY.9.20.000073
ORF1ab/nsp5A-B241P241LcCtcTt22AY.980.000158
ORF1ab/nsp5A-B241P241TCcTAcC12B.10.000009
ORF1ab/nsp5A-B241P241TCctAct12B.10.000009
ORF1ab/nsp5A-B241P241TCctAct22B.1.10.000036
ORF1ab/nsp5A-B241P241SCctTct22B.1.1.2140.000111
ORF1ab/nsp5A-B241P241HcCtcAt22B.1.1.2370.010811
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.1.2650.006309
ORF1ab/nsp5A-B241P241PccTccC22B.1.1.3010.002358
ORF1ab/nsp5A-B241P241SCctTct22B.1.1.3490.020619
ORF1ab/nsp5A-B241P241SCctTct22B.1.110.30.001437
ORF1ab/nsp5A-B241P241delCCT---22B.1.1770.000026
ORF1ab/nsp5A-B241P241PccTccC22B.1.1770.000026
ORF1ab/nsp5A-B241P241SCctTct22B.1.1770.000026
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.177.210.000153
ORF1ab/nsp5A-B241P241SCctTct22B.1.177.730.001133
ORF1ab/nsp5A-B241P241SCctTct22B.1.214.20.001199
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.2210.000142
ORF1ab/nsp5A-B241P241PccTccC22B.1.2430.000139
ORF1ab/nsp5A-B241P241PccTccG22B.1.3790.034483
ORF1ab/nsp5A-B241P241LcCtcTt22B.1.4990.002101
ORF1ab/nsp5A-B241P241SCctTct22B.1.5600.009259
ORF1ab/nsp5A-B241P241SCctTct22B.1.5960.000174
ORF1ab/nsp5A-B241P241PccTccC22B.1.6200.001892
ORF1ab/nsp5A-B241P241SCctTct22B.1.6210.000177
ORF1ab/nsp5A-B241P241LcCtcTt22C.350.001548
ORF1ab/nsp5A-B241P241LcCTcTC12D.20.000075
ORF1ab/nsp5A-B241P241LcCtcTt12D.20.000075
ORF1ab/nsp5A-B241P241LcCtcTt22P.1.20.002312
ORF1ab/nsp5A-B241P241LcCtcTt22P.1.60.003891
ORF1ab/nsp5A-B241P241TCctAct22P.1.70.000639
ORF1ab/nsp5A-B241P241LcCtcTt22R.10.00018
ORF1ab/nsp5A-B241P241SCctTct11A0.000387
ORF1ab/nsp5A-B241P241LcCtcTt11A0.000387
ORF1ab/nsp5A-B241P241SCctTct11A.230.010526
ORF1ab/nsp5A-B241P241SCctTct11A.23.10.000704
ORF1ab/nsp5A-B241P241CCCtTGt11All0
ORF1ab/nsp5A-B241P241WCCTTGG11All0
ORF1ab/nsp5A-B241P241LcCtcTt11AV.10.005051
ORF1ab/nsp5A-B241P241SCctTct11AY.1020.000027
ORF1ab/nsp5A-B241P241PccTccG11AY.1020.000027
ORF1ab/nsp5A-B241P241HcCtcAt11AY.1030.000006
ORF1ab/nsp5A-B241P241del1ccTcc-11AY.1030.000006
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1050.000643
ORF1ab/nsp5A-B241P241PccTccA11AY.1110.000183
ORF1ab/nsp5A-B241P241HcCtcAt11AY.1130.000142
ORF1ab/nsp5A-B241P241SCctTct11AY.1140.000231
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1170.000085
ORF1ab/nsp5A-B241P241TCctAct11AY.1180.000063
ORF1ab/nsp5A-B241P241LcCtcTt11AY.1180.000063
ORF1ab/nsp5A-B241P241PccTccG11AY.1190.000035
ORF1ab/nsp5A-B241P241del2cCTc--11AY.120.000316
ORF1ab/nsp5A-B241P241delCCT---11AY.1200.000037
ORF1ab/nsp5A-B241P241SCctTct11AY.1200.000037
ORF1ab/nsp5A-B241P241SCctTct11AY.130.000161
ORF1ab/nsp5A-B241P241PccTccC11AY.140.000088
ORF1ab/nsp5A-B241P241LcCtcTt11AY.160.00038
ORF1ab/nsp5A-B241P241PccTccC11AY.200.000039
ORF1ab/nsp5A-B241P241HcCtcAt11AY.230.00007
ORF1ab/nsp5A-B241P241delCCT---11AY.250.000006
ORF1ab/nsp5A-B241P241HcCtcAt11AY.250.000006
ORF1ab/nsp5A-B241P241SCctTct11AY.290.000016
ORF1ab/nsp5A-B241P241LcCtcTt11AY.340.000097
ORF1ab/nsp5A-B241P241PccTccC11AY.340.000097
ORF1ab/nsp5A-B241P241LcCtcTt11AY.380.000499
ORF1ab/nsp5A-B241P241PccTccC11AY.380.000499
ORF1ab/nsp5A-B241P241HcCtcAt11AY.390.000025
ORF1ab/nsp5A-B241P241SCctTct11AY.39.10.00004
ORF1ab/nsp5A-B241P241RcCtcGt11AY.40.000002
ORF1ab/nsp5A-B241P241LcCtcTt11AY.4.2.10.000149
ORF1ab/nsp5A-B241P241SCctTct11AY.4.2.10.000149
ORF1ab/nsp5A-B241P241PccTccA11AY.4.2.10.000149
ORF1ab/nsp5A-B241P241LcCtcTt11AY.4.50.000107
ORF1ab/nsp5A-B241P241SCctTct11AY.420.00004
ORF1ab/nsp5A-B241P241HcCtcAt11AY.420.00004
ORF1ab/nsp5A-B241P241delCCT---11AY.440.000006
ORF1ab/nsp5A-B241P241del1ccTcc-11AY.440.000006
ORF1ab/nsp5A-B241P241PccTccC11AY.460.000104
ORF1ab/nsp5A-B241P241SCctTct11AY.46.20.000635
ORF1ab/nsp5A-B241P241LcCtcTt11AY.46.40.000165
ORF1ab/nsp5A-B241P241SCctTct11AY.46.60.000072
ORF1ab/nsp5A-B241P241TCctAct11AY.470.000031
ORF1ab/nsp5A-B241P241RcCtcGt11AY.50.000021
ORF1ab/nsp5A-B241P241HcCtcAt11AY.5.10.003759
ORF1ab/nsp5A-B241P241SCctTct11AY.5.40.000277
ORF1ab/nsp5A-B241P241LcCtcTt11AY.530.000288
ORF1ab/nsp5A-B241P241delCCT---11AY.540.000095
ORF1ab/nsp5A-B241P241LcCtcTt11AY.540.000095
ORF1ab/nsp5A-B241P241SCctTct11AY.540.000095
ORF1ab/nsp5A-B241P241LcCtcTt11AY.550.000917
ORF1ab/nsp5A-B241P241SCctTct11AY.590.00053
ORF1ab/nsp5A-B241P241LcCtcTt11AY.60.000041
ORF1ab/nsp5A-B241P241delCCT---11AY.600.000938
ORF1ab/nsp5A-B241P241SCctTct11AY.610.000105
ORF1ab/nsp5A-B241P241PccTccA11AY.610.000105
ORF1ab/nsp5A-B241P241SCctTct11AY.680.000274
ORF1ab/nsp5A-B241P241SCctTct11AY.700.000209
ORF1ab/nsp5A-B241P241SCctTct11AY.750.000056
ORF1ab/nsp5A-B241P241HcCtcAt11AY.75.10.00018
ORF1ab/nsp5A-B241P241delCCT---11AY.810.001992
ORF1ab/nsp5A-B241P241CCCtTGt11AY.830.001724
ORF1ab/nsp5A-B241P241SCctTct11AY.850.000427
ORF1ab/nsp5A-B241P241TCctAct11AY.90.000068
ORF1ab/nsp5A-B241P241PccTccC11AY.9.10.000084
ORF1ab/nsp5A-B241P241LcCtcTt11AY.960.002075
ORF1ab/nsp5A-B241P241LcCtcTt11AY.98.10.000048
ORF1ab/nsp5A-B241P241LcCtcTt11B0.000128
ORF1ab/nsp5A-B241P241delCCT---11B.10.000009
ORF1ab/nsp5A-B241P241PccTccC11B.1.1.1010.01
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.1480.008772
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.1910.004762
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2140.000055
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2670.010101
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.270.00565
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.2800.003086
ORF1ab/nsp5A-B241P241SCctTct11B.1.1.3720.000689
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.3740.002375
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.3980.003226
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.3980.003226
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.4090.002833
ORF1ab/nsp5A-B241P241del2cCTc--11B.1.1.4160.000905
ORF1ab/nsp5A-B241P241SCctTct11B.1.1.4320.001266
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1.5190.00004
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.520.012195
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.5250.005464
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.5280.004808
ORF1ab/nsp5A-B241P241WCCTTGG11B.1.1.70.000001
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1.80.003584
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.1390.000733
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1570.002985
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.1600.000031
ORF1ab/nsp5A-B241P241SCctTct11B.1.1600.000031
ORF1ab/nsp5A-B241P241SCctTct11B.1.160.140.002119
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.100.000878
ORF1ab/nsp5A-B241P241delCCT---11B.1.177.160.000664
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.170.000821
ORF1ab/nsp5A-B241P241delCCT---11B.1.177.40.000211
ORF1ab/nsp5A-B241P241PccTccC11B.1.177.440.000519
ORF1ab/nsp5A-B241P241SCctTct11B.1.177.570.000281
ORF1ab/nsp5A-B241P241TCctAct11B.1.177.570.000281
ORF1ab/nsp5A-B241P241SCctTct11B.1.177.650.000665
ORF1ab/nsp5A-B241P241PccTccC11B.1.177.70.000165
ORF1ab/nsp5A-B241P241PccTccC11B.1.177.720.00339
ORF1ab/nsp5A-B241P241delCCT---11B.1.177.760.002494
ORF1ab/nsp5A-B241P241PccTccC11B.1.177.790.002342
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.810.000189
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.177.870.000728
ORF1ab/nsp5A-B241P241delCCT---11B.1.177.870.000728
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.20.000009
ORF1ab/nsp5A-B241P241RcCtcGt11B.1.20.000009
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.214.20.0006
ORF1ab/nsp5A-B241P241delCCT---11B.1.2180.005155
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.2320.000537
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.2400.000216
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.2430.00007
ORF1ab/nsp5A-B241P241PccTccC11B.1.2580.000067
ORF1ab/nsp5A-B241P241delCCT---11B.1.2580.000067
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.258.120.007874
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.258.140.00098
ORF1ab/nsp5A-B241P241delCCT---11B.1.258.170.000104
ORF1ab/nsp5A-B241P241delCCT---11B.1.3110.000275
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.3110.000275
ORF1ab/nsp5A-B241P241SCctTct11B.1.3360.002439
ORF1ab/nsp5A-B241P241TCctAct11B.1.3380.008621
ORF1ab/nsp5A-B241P241PccTccC11B.1.3490.000715
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.3490.000715
ORF1ab/nsp5A-B241P241PccTccC11B.1.3510.00003
ORF1ab/nsp5A-B241P241HcCtcAt11B.1.3510.00003
ORF1ab/nsp5A-B241P241SCctTct11B.1.36.160.001425
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.36.70.004
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.36.90.003215
ORF1ab/nsp5A-B241P241SCctTct11B.1.3960.000706
ORF1ab/nsp5A-B241P241TCctAct11B.1.4270.00005
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.4670.04
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.4700.001404
ORF1ab/nsp5A-B241P241TCctAct11B.1.4740.001901
ORF1ab/nsp5A-B241P241PccTccC11B.1.5610.000397
ORF1ab/nsp5A-B241P241del2cCTc--11B.1.5670.003333
ORF1ab/nsp5A-B241P241SCctTct11B.1.5770.000687
ORF1ab/nsp5A-B241P241PccTccG11B.1.5770.000687
ORF1ab/nsp5A-B241P241SCctTct11B.1.5800.004065
ORF1ab/nsp5A-B241P241SCctTct11B.1.5900.004545
ORF1ab/nsp5A-B241P241del2cCTc--11B.1.5960.000087
ORF1ab/nsp5A-B241P241PccTccC11B.1.5960.000087
ORF1ab/nsp5A-B241P241SCctTct11B.1.6090.000479
ORF1ab/nsp5A-B241P241delCCT---11B.1.617.20.000004
ORF1ab/nsp5A-B241P241TCctAct11B.1.617.20.000004
ORF1ab/nsp5A-B241P241SCctTct11B.1.6190.000871
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.6230.000536
ORF1ab/nsp5A-B241P241LcCtcTt11B.1.6280.000352
ORF1ab/nsp5A-B241P241PccTccC11B.1.6280.000352
ORF1ab/nsp5A-B241P241PccTccC11B.1.6370.000073
ORF1ab/nsp5A-B241P241SCctTct11B.40.002208
ORF1ab/nsp5A-B241P241LcCtcTt11B.6.10.026316
ORF1ab/nsp5A-B241P241SCctTct11C.180.002591
ORF1ab/nsp5A-B241P241LcCtcTt11C.36.30.000567
ORF1ab/nsp5A-B241P241LcCtcTt11C.36.3.10.002717
ORF1ab/nsp5A-B241P241HcCtcAt11C.370.000116
ORF1ab/nsp5A-B241P241PccTccC11D.20.000075
ORF1ab/nsp5A-B241P241TCctAct11L.10.001905
ORF1ab/nsp5A-B241P241delCCT---11N.40.004255
ORF1ab/nsp5A-B241P241LcCtcTt11P.1.10.000318
ORF1ab/nsp5A-B241P241PccTccA11P.1.140.000048
ORF1ab/nsp5A-B241P241SCctTct11P.1.150.000232
ORF1ab/nsp5A-B241P241SCctTct11P.1.70.000319
ORF1ab/nsp5A-B241P241SCctTct11P.60.003145
ORF1ab/nsp5A-B241P241PccTccC11Q.10.000126
ORF1ab/nsp5A-B241P241LcCtcTt11Q.20.000613
ORF1ab/nsp5A-B241P241HcCtcAt11Q.80.000165