CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 234

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B234A234VA3497VnonsyngCtgTt382938270.99947810754-10756
ORF1ab/nsp5A-B234A234VA3497VnonsyngCTgTA382920.0005223310754-10756
ORF1ab/nsp5A-B234A234TA3497TnonsynGctAct475475110754-10756
ORF1ab/nsp5A-B234A234SA3497SnonsynGctTct223223110754-10756
ORF1ab/nsp5A-B234A234AA3497AsyngcTgcC99830.83838410754-10756
ORF1ab/nsp5A-B234A234AA3497AsyngcTgcG9990.090909110754-10756
ORF1ab/nsp5A-B234A234AA3497AsyngcTgcA9970.070707110754-10756
ORF1ab/nsp5A-B234A234delA3497deldelGCT---4747110754-10756
ORF1ab/nsp5A-B234A234DA3497DnonsyngCtgAt88110754-10756
ORF1ab/nsp5A-B234A234del1A3497del1delgcTgc-540.810754-10756
ORF1ab/nsp5A-B234A234del1A3497del1delgCtg-t510.210754-10756
ORF1ab/nsp5A-B234A234FA3497FnonsynGCtTTt33110754-10756
ORF1ab/nsp5A-B234A234GA3497GnonsyngCtgGt320.66666710754-10756
ORF1ab/nsp5A-B234A234GA3497GnonsyngCTgGC310.33333310754-10756
ORF1ab/nsp5A-B234A234NA3497NnonsynGCtAAt22110754-10756
ORF1ab/nsp5A-B234A234LA3497LnonsynGCTTTA22110754-10756
ORF1ab/nsp5A-B234A234PA3497PnonsynGctCct22110754-10756
ORF1ab/nsp5A-B234A234del2A3497del2delGCt--t210.510754-10756
ORF1ab/nsp5A-B234A234del2A3497del2delgCTg--210.510754-10756
ORF1ab/nsp5A-B234A234YA3497YnonsynGCtTAt11110754-10756

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B234A234VgCtgTt38273829All0.000732
ORF1ab/nsp5A-B234A234VgCTgTA23829All0
ORF1ab/nsp5A-B234A234VgCtgTt644644AY.40.001002
ORF1ab/nsp5A-B234A234TGctAct475475All0.000091
ORF1ab/nsp5A-B234A234VgCtgTt269269B.1.20.002369
ORF1ab/nsp5A-B234A234SGctTct223223All0.000043
ORF1ab/nsp5A-B234A234VgCtgTt218218AY.30.002168
ORF1ab/nsp5A-B234A234VgCtgTt212212B.1.10.003846
ORF1ab/nsp5A-B234A234TGctAct176176AY.9.20.006464
ORF1ab/nsp5A-B234A234VgCtgTt153153AY.420.006155
ORF1ab/nsp5A-B234A234VgCtgTt151151B.1.1770.001988
ORF1ab/nsp5A-B234A234VgCtgTt126126B.1.617.20.000474
ORF1ab/nsp5A-B234A234VgCtgTt113113AY.250.00068
ORF1ab/nsp5A-B234A234VgCtgTt100100AY.39.10.003961
ORF1ab/nsp5A-B234A234AgcTgcC8399All0.000016
ORF1ab/nsp5A-B234A234AgcTgcG999All0.000002
ORF1ab/nsp5A-B234A234AgcTgcA799All0.000001
ORF1ab/nsp5A-B234A234VgCtgTt9898B.10.000898
ORF1ab/nsp5A-B234A234VgCtgTt9696B.1.1.70.000086
ORF1ab/nsp5A-B234A234VgCtgTt8686AY.430.000381
ORF1ab/nsp5A-B234A234VgCtgTt8585B.1.4290.002
ORF1ab/nsp5A-B234A234SGctTct7979D.20.005928
ORF1ab/nsp5A-B234A234VgCtgTt7676AY.1030.000472
ORF1ab/nsp5A-B234A234VgCtgTt7575AY.440.000457
ORF1ab/nsp5A-B234A234VgCtgTt6565B.1.1.5190.002581
ORF1ab/nsp5A-B234A234VgCtgTt5555B.1.1.3490.56701
ORF1ab/nsp5A-B234A234VgCtgTt5454B.1.1.3470.981818
ORF1ab/nsp5A-B234A234VgCtgTt4848AY.1020.001273
ORF1ab/nsp5A-B234A234delGCT---4747All0.000009
ORF1ab/nsp5A-B234A234TGctAct4444B.1.1.70.000039
ORF1ab/nsp5A-B234A234TGctAct4444B.1.2210.003125
ORF1ab/nsp5A-B234A234AgcTgcC4143B.1.1.70.000037
ORF1ab/nsp5A-B234A234AgcTgcG143B.1.1.70.000001
ORF1ab/nsp5A-B234A234AgcTgcA143B.1.1.70.000001
ORF1ab/nsp5A-B234A234SGctTct4141B.1.5960.003573
ORF1ab/nsp5A-B234A234VgCtgTt4040AY.1190.001412
ORF1ab/nsp5A-B234A234VgCtgTt3939B.1.3400.167382
ORF1ab/nsp5A-B234A234TGctAct3232AY.3.10.002728
ORF1ab/nsp5A-B234A234VgCtgTt3030AY.120.009482
ORF1ab/nsp5A-B234A234VgCtgTt3030AY.50.000619
ORF1ab/nsp5A-B234A234VgCtgTt2929AY.390.000717
ORF1ab/nsp5A-B234A234VgCtgTt2828AY.98.10.001356
ORF1ab/nsp5A-B234A234VgCtgTt2626B.1.2430.001809
ORF1ab/nsp5A-B234A234VgCtgTt2626B.1.2580.00173
ORF1ab/nsp5A-B234A234VgCtgTt2525AY.1200.000929
ORF1ab/nsp5A-B234A234TGctAct2525AY.40.000039
ORF1ab/nsp5A-B234A234VgCtgTt2525B.1.1.10.008167
ORF1ab/nsp5A-B234A234VgCtgTt2424B.1.1.2310.074303
ORF1ab/nsp5A-B234A234VgCtgTt2323AY.4.20.000499
ORF1ab/nsp5A-B234A234VgCtgTt2222AY.1000.001012
ORF1ab/nsp5A-B234A234VgCtgTt2222AY.290.000347
ORF1ab/nsp5A-B234A234TGctAct2222AY.30.000219
ORF1ab/nsp5A-B234A234VgCtgTt2121B.1.177.870.015284
ORF1ab/nsp5A-B234A234VgCtgTt2020B.1.6210.00177
ORF1ab/nsp5A-B234A234VgCtgTt1818B.1.4950.163636
ORF1ab/nsp5A-B234A234TGctAct1616AY.1130.002278
ORF1ab/nsp5A-B234A234delGCT---1616B.1.1.70.000014
ORF1ab/nsp5A-B234A234VgCtgTt1414B.1.1600.000437
ORF1ab/nsp5A-B234A234VgCtgTt1313AY.330.000868
ORF1ab/nsp5A-B234A234VgCtgTt1313B.1.1.3560.111111
ORF1ab/nsp5A-B234A234VgCtgTt1212AY.46.60.000866
ORF1ab/nsp5A-B234A234VgCtgTt1212B.1.1.2100.068571
ORF1ab/nsp5A-B234A234VgCtgTt1212B.1.4270.000606
ORF1ab/nsp5A-B234A234VgCtgTt1212B.1.5960.001046
ORF1ab/nsp5A-B234A234VgCtgTt1111B.1.1.3060.004822
ORF1ab/nsp5A-B234A234SGctTct1111B.1.1.70.00001
ORF1ab/nsp5A-B234A234VgCtgTt1111B.1.2210.000781
ORF1ab/nsp5A-B234A234VgCtgTt1010B.1.1.280.003112
ORF1ab/nsp5A-B234A234TGctAct1010B.1.36.170.004941
ORF1ab/nsp5A-B234A234VgCtgTt1010B.1.5170.00427
ORF1ab/nsp5A-B234A234VgCtgTt99AY.200.00035
ORF1ab/nsp5A-B234A234VgCtgTt99B.1.1.2140.000499
ORF1ab/nsp5A-B234A234VgCtgTt99B.1.177.40.0019
ORF1ab/nsp5A-B234A234VgCtgTt99C.370.001045
ORF1ab/nsp5A-B234A234VgCtgTt99R.10.00081
ORF1ab/nsp5A-B234A234VgCtgTt88AD.20.001752
ORF1ab/nsp5A-B234A234DgCtgAt88All0.000002
ORF1ab/nsp5A-B234A234SGctTct88AY.40.000012
ORF1ab/nsp5A-B234A234VgCtgTt88AY.770.009019
ORF1ab/nsp5A-B234A234TGctAct88AY.90.000541
ORF1ab/nsp5A-B234A234VgCtgTt88B0.001022
ORF1ab/nsp5A-B234A234VgCtgTt88B.1.1.4320.010127
ORF1ab/nsp5A-B234A234TGctAct88B.1.20.00007
ORF1ab/nsp5A-B234A234AgcTgcG68B.1.20.000053
ORF1ab/nsp5A-B234A234AgcTgcC28B.1.20.000018
ORF1ab/nsp5A-B234A234VgCtgTt88B.1.258.170.000832
ORF1ab/nsp5A-B234A234TGctAct88B.370.228571
ORF1ab/nsp5A-B234A234VgCtgTt77AY.3.10.000597
ORF1ab/nsp5A-B234A234TGctAct77AY.440.000043
ORF1ab/nsp5A-B234A234VgCtgTt77B.1.1.1590.03271
ORF1ab/nsp5A-B234A234VgCtgTt77B.1.3110.001922
ORF1ab/nsp5A-B234A234VgCtgTt77B.1.360.001021
ORF1ab/nsp5A-B234A234VgCtgTt77B.1.466.20.002739
ORF1ab/nsp5A-B234A234VgCtgTt66AY.230.000418
ORF1ab/nsp5A-B234A234SGctTct66AY.30.00006
ORF1ab/nsp5A-B234A234VgCtgTt66AY.360.000889
ORF1ab/nsp5A-B234A234VgCtgTt66AY.60.000247
ORF1ab/nsp5A-B234A234VgCtgTt66B.1.1.3170.00247
ORF1ab/nsp5A-B234A234VgCtgTt66B.1.1.3810.24
ORF1ab/nsp5A-B234A234VgCtgTt66B.1.1.4160.00543
ORF1ab/nsp5A-B234A234TGctAct66B.1.1.630.002315
ORF1ab/nsp5A-B234A234VgCtgTt66B.1.5950.001566
ORF1ab/nsp5A-B234A234VgCtgTt66B.1.617.10.000774
ORF1ab/nsp5A-B234A234VgCtgTt66P.1.170.000971
ORF1ab/nsp5A-B234A234del1gcTgc-45All0.000001
ORF1ab/nsp5A-B234A234del1gCtg-t15All0
ORF1ab/nsp5A-B234A234SGctTct55AY.1030.000031
ORF1ab/nsp5A-B234A234VgCtgTt55AY.1170.000423
ORF1ab/nsp5A-B234A234SGctTct55AY.120.2.10.002491
ORF1ab/nsp5A-B234A234delGCT---55AY.40.000008
ORF1ab/nsp5A-B234A234VgCtgTt55AY.790.006053
ORF1ab/nsp5A-B234A234SGctTct55AY.820.006784
ORF1ab/nsp5A-B234A234AgcTgcC35B.10.000027
ORF1ab/nsp5A-B234A234AgcTgcA25B.10.000018
ORF1ab/nsp5A-B234A234VgCtgTt55B.1.1.2160.004452
ORF1ab/nsp5A-B234A234TGctAct55B.1.1.3770.006906
ORF1ab/nsp5A-B234A234VgCtgTt55B.1.177.70.000824
ORF1ab/nsp5A-B234A234VgCtgTt55P.10.000079
ORF1ab/nsp5A-B234A234VgCtgTt55P.1.70.001596
ORF1ab/nsp5A-B234A234SGctTct55R.10.00045
ORF1ab/nsp5A-B234A234VgCtgTt240.111111
ORF1ab/nsp5A-B234A234VgCTgTA240.111111
ORF1ab/nsp5A-B234A234VgCtgTt44A.2.50.001996
ORF1ab/nsp5A-B234A234TGctAct44AY.1020.000106
ORF1ab/nsp5A-B234A234VgCtgTt44AY.1180.000251
ORF1ab/nsp5A-B234A234SGctTct44AY.250.000024
ORF1ab/nsp5A-B234A234VgCtgTt44AY.260.000113
ORF1ab/nsp5A-B234A234VgCtgTt44AY.39.20.006163
ORF1ab/nsp5A-B234A234VgCtgTt44AY.570.002625
ORF1ab/nsp5A-B234A234VgCtgTt44AY.740.000463
ORF1ab/nsp5A-B234A234VgCtgTt44AY.750.000224
ORF1ab/nsp5A-B234A234VgCtgTt44AY.950.003044
ORF1ab/nsp5A-B234A234DgCtgAt44B.10.000037
ORF1ab/nsp5A-B234A234SGctTct44B.1.10.000073
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.1.2220.000816
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.177.860.000734
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.2360.008214
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.36.80.004
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.4000.001716
ORF1ab/nsp5A-B234A234VgCtgTt44B.1.5820.001963
ORF1ab/nsp5A-B234A234SGctTct44B.1.617.20.000015
ORF1ab/nsp5A-B234A234SGctTct44B.1.910.008299
ORF1ab/nsp5A-B234A234FGCtTTt33All0.000001
ORF1ab/nsp5A-B234A234GgCtgGt23All0
ORF1ab/nsp5A-B234A234GgCTgGC13All0
ORF1ab/nsp5A-B234A234SGctTct33AY.1000.000138
ORF1ab/nsp5A-B234A234TGctAct33AY.1030.000019
ORF1ab/nsp5A-B234A234TGctAct33AY.1190.000106
ORF1ab/nsp5A-B234A234VgCtgTt33AY.120.10.000963
ORF1ab/nsp5A-B234A234TGctAct33AY.250.000018
ORF1ab/nsp5A-B234A234VgCtgTt33AY.270.000194
ORF1ab/nsp5A-B234A234SGctTct33AY.290.000047
ORF1ab/nsp5A-B234A234AgcTgcC33AY.40.000005
ORF1ab/nsp5A-B234A234delGCT---33AY.4.50.000322
ORF1ab/nsp5A-B234A234SGctTct33AY.430.000013
ORF1ab/nsp5A-B234A234AgcTgcC33AY.440.000018
ORF1ab/nsp5A-B234A234VgCtgTt33AY.610.000314
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.1.1920.006928
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.1.2080.036585
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.1.330.001263
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.1.3720.002066
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.1.4480.006098
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.160.70.006237
ORF1ab/nsp5A-B234A234delGCT---33B.1.1770.00004
ORF1ab/nsp5A-B234A234TGctAct33B.1.1770.00004
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.177.160.001993
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.177.730.001699
ORF1ab/nsp5A-B234A234SGctTct33B.1.20.000026
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.2180.015464
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.2400.000647
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.3460.003932
ORF1ab/nsp5A-B234A234TGctAct33B.1.3750.002459
ORF1ab/nsp5A-B234A234VgCtgTt33B.1.5490.021583
ORF1ab/nsp5A-B234A234TGctAct33B.1.617.20.000011
ORF1ab/nsp5A-B234A234AgcTgcC33B.1.617.20.000011
ORF1ab/nsp5A-B234A234AgcTgcA33B.1.6210.000266
ORF1ab/nsp5A-B234A234AgcTgcC33B.1.6280.001057
ORF1ab/nsp5A-B234A234TGctAct33P.10.000047
ORF1ab/nsp5A-B234A234VgCtgTt33P.20.00056
ORF1ab/nsp5A-B234A234FGCtTTt220.111111
ORF1ab/nsp5A-B234A234LGCTTTA220.111111
ORF1ab/nsp5A-B234A234VgCtgTt22A.20.001324
ORF1ab/nsp5A-B234A234NGCtAAt22All0
ORF1ab/nsp5A-B234A234LGCTTTA22All0
ORF1ab/nsp5A-B234A234PGctCct22All0
ORF1ab/nsp5A-B234A234del2GCt--t12All0
ORF1ab/nsp5A-B234A234del2gCTg--12All0
ORF1ab/nsp5A-B234A234VgCtgTt22AY.1010.000981
ORF1ab/nsp5A-B234A234AgcTgcC22AY.1030.000012
ORF1ab/nsp5A-B234A234VgCtgTt22AY.1060.00067
ORF1ab/nsp5A-B234A234VgCtgTt22AY.1130.000285
ORF1ab/nsp5A-B234A234VgCtgTt22AY.1160.000574
ORF1ab/nsp5A-B234A234SGctTct22AY.1190.000071
ORF1ab/nsp5A-B234A234VgCtgTt22AY.140.000176
ORF1ab/nsp5A-B234A234VgCtgTt22AY.20.000712
ORF1ab/nsp5A-B234A234TGctAct22AY.290.000032
ORF1ab/nsp5A-B234A234VgCtgTt22AY.29.10.000441
ORF1ab/nsp5A-B234A234AgcTgcC22AY.30.00002
ORF1ab/nsp5A-B234A234AgcTgcC22AY.39.10.000079
ORF1ab/nsp5A-B234A234VgCtgTt22AY.4.2.10.000298
ORF1ab/nsp5A-B234A234VgCtgTt22AY.4.50.000215
ORF1ab/nsp5A-B234A234AgcTgcC22AY.430.000009
ORF1ab/nsp5A-B234A234VgCtgTt22AY.450.000243
ORF1ab/nsp5A-B234A234VgCtgTt22AY.460.000208
ORF1ab/nsp5A-B234A234VgCtgTt22AY.46.40.000329
ORF1ab/nsp5A-B234A234VgCtgTt22AY.470.000062
ORF1ab/nsp5A-B234A234VgCtgTt22AY.520.001629
ORF1ab/nsp5A-B234A234VgCtgTt22AY.530.000575
ORF1ab/nsp5A-B234A234VgCtgTt22AY.540.000191
ORF1ab/nsp5A-B234A234VgCtgTt22AY.600.001876
ORF1ab/nsp5A-B234A234VgCtgTt22AY.680.000547
ORF1ab/nsp5A-B234A234VgCtgTt22AY.7.20.001119
ORF1ab/nsp5A-B234A234VgCtgTt22AY.710.00095
ORF1ab/nsp5A-B234A234delGCT---22AY.90.000135
ORF1ab/nsp5A-B234A234VgCtgTt22AY.90.000135
ORF1ab/nsp5A-B234A234VgCtgTt22AY.9.20.000073
ORF1ab/nsp5A-B234A234VgCtgTt22AY.980.000158
ORF1ab/nsp5A-B234A234AgcTgcC22AY.980.000158
ORF1ab/nsp5A-B234A234TGctAct22AY.98.10.000097
ORF1ab/nsp5A-B234A234TGctAct22B.10.000018
ORF1ab/nsp5A-B234A234SGctTct22B.10.000018
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.1530.002191
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.1680.052632
ORF1ab/nsp5A-B234A234SGctTct22B.1.1.250.001137
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.250.001137
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.3260.003521
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.3330.002153
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.3550.030769
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.3690.000892
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.4090.005666
ORF1ab/nsp5A-B234A234SGctTct22B.1.1.4090.005666
ORF1ab/nsp5A-B234A234SGctTct22B.1.1.4320.002532
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1.4620.017241
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.1570.00597
ORF1ab/nsp5A-B234A234SGctTct22B.1.1600.000062
ORF1ab/nsp5A-B234A234SGctTct22B.1.1770.000026
ORF1ab/nsp5A-B234A234delGCT---22B.1.177.870.001456
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.177.90.002663
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.2230.005556
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.2340.000264
ORF1ab/nsp5A-B234A234TGctAct22B.1.3510.000059
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.36.290.001035
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.4090.001563
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.4160.002538
ORF1ab/nsp5A-B234A234AgcTgcC22B.1.4270.000101
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.438.10.000215
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.5610.000794
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.5710.019417
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.5760.001813
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.5980.033898
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.617.30.00597
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.621.10.001012
ORF1ab/nsp5A-B234A234VgCtgTt22B.1.6230.001073
ORF1ab/nsp5A-B234A234TGctAct22C.160.002121
ORF1ab/nsp5A-B234A234SGctTct22C.36.30.001134
ORF1ab/nsp5A-B234A234VgCtgTt22C.380.016129
ORF1ab/nsp5A-B234A234VgCtgTt22Y.10.025641
ORF1ab/nsp5A-B234A234TGctAct11A0.000387
ORF1ab/nsp5A-B234A234VgCtgTt11A0.000387
ORF1ab/nsp5A-B234A234VgCtgTt11A.10.000282
ORF1ab/nsp5A-B234A234VgCtgTt11A.23.10.000704
ORF1ab/nsp5A-B234A234VgCtgTt11AH.30.003802
ORF1ab/nsp5A-B234A234VgCtgTt11AL.10.012987
ORF1ab/nsp5A-B234A234YGCtTAt11All0
ORF1ab/nsp5A-B234A234VgCtgTt11AU.20.002421
ORF1ab/nsp5A-B234A234AgcTgcC11AY.1020.000027
ORF1ab/nsp5A-B234A234SGctTct11AY.1020.000027
ORF1ab/nsp5A-B234A234VgCtgTt11AY.1050.000643
ORF1ab/nsp5A-B234A234AgcTgcC11AY.1070.000466
ORF1ab/nsp5A-B234A234VgCtgTt11AY.1080.001103
ORF1ab/nsp5A-B234A234VgCtgTt11AY.1100.000113
ORF1ab/nsp5A-B234A234SGctTct11AY.1130.000142
ORF1ab/nsp5A-B234A234delGCT---11AY.1200.000037
ORF1ab/nsp5A-B234A234TGctAct11AY.1200.000037
ORF1ab/nsp5A-B234A234VgCtgTt11AY.120.2.10.000498
ORF1ab/nsp5A-B234A234TGctAct11AY.130.000161
ORF1ab/nsp5A-B234A234VgCtgTt11AY.190.00114
ORF1ab/nsp5A-B234A234AgcTgcC11AY.230.00007
ORF1ab/nsp5A-B234A234AgcTgcA11AY.240.000431
ORF1ab/nsp5A-B234A234delGCT---11AY.250.000006
ORF1ab/nsp5A-B234A234AgcTgcC11AY.250.000006
ORF1ab/nsp5A-B234A234AgcTgcC11AY.290.000016
ORF1ab/nsp5A-B234A234SGctTct11AY.330.000067
ORF1ab/nsp5A-B234A234TGctAct11AY.330.000067
ORF1ab/nsp5A-B234A234VgCtgTt11AY.340.000097
ORF1ab/nsp5A-B234A234VgCtgTt11AY.350.000233
ORF1ab/nsp5A-B234A234TGctAct11AY.370.000316
ORF1ab/nsp5A-B234A234VgCtgTt11AY.370.000316
ORF1ab/nsp5A-B234A234AgcTgcC11AY.390.000025
ORF1ab/nsp5A-B234A234VgCtgTt11AY.400.000964
ORF1ab/nsp5A-B234A234VgCtgTt11AY.410.000294
ORF1ab/nsp5A-B234A234TGctAct11AY.420.00004
ORF1ab/nsp5A-B234A234DgCtgAt11AY.430.000004
ORF1ab/nsp5A-B234A234TGctAct11AY.430.000004
ORF1ab/nsp5A-B234A234del1gcTgc-11AY.430.000004
ORF1ab/nsp5A-B234A234delGCT---11AY.440.000006
ORF1ab/nsp5A-B234A234del1gcTgc-11AY.440.000006
ORF1ab/nsp5A-B234A234TGctAct11AY.460.000104
ORF1ab/nsp5A-B234A234VgCtgTt11AY.46.20.000635
ORF1ab/nsp5A-B234A234TGctAct11AY.46.60.000072
ORF1ab/nsp5A-B234A234DgCtgAt11AY.470.000031
ORF1ab/nsp5A-B234A234TGctAct11AY.50.000021
ORF1ab/nsp5A-B234A234AgcTgcC11AY.50.000021
ORF1ab/nsp5A-B234A234AgcTgcC11AY.5.40.000277
ORF1ab/nsp5A-B234A234VgCtgTt11AY.5.40.000277
ORF1ab/nsp5A-B234A234VgCtgTt11AY.510.000909
ORF1ab/nsp5A-B234A234delGCT---11AY.540.000095
ORF1ab/nsp5A-B234A234TGctAct11AY.540.000095
ORF1ab/nsp5A-B234A234TGctAct11AY.60.000041
ORF1ab/nsp5A-B234A234delGCT---11AY.600.000938
ORF1ab/nsp5A-B234A234SGctTct11AY.610.000105
ORF1ab/nsp5A-B234A234VgCtgTt11AY.620.000436
ORF1ab/nsp5A-B234A234VgCtgTt11AY.670.000464
ORF1ab/nsp5A-B234A234VgCtgTt11AY.7.10.000113
ORF1ab/nsp5A-B234A234VgCtgTt11AY.700.000209
ORF1ab/nsp5A-B234A234VgCtgTt11AY.800.001129
ORF1ab/nsp5A-B234A234delGCT---11AY.810.001992
ORF1ab/nsp5A-B234A234VgCtgTt11AY.850.000427
ORF1ab/nsp5A-B234A234VgCtgTt11AY.880.000884
ORF1ab/nsp5A-B234A234VgCtgTt11AY.910.00073
ORF1ab/nsp5A-B234A234VgCtgTt11AY.930.000273
ORF1ab/nsp5A-B234A234TGctAct11AY.99.20.000092
ORF1ab/nsp5A-B234A234VgCtgTt11AZ.20.000821
ORF1ab/nsp5A-B234A234TGctAct11B0.000128
ORF1ab/nsp5A-B234A234delGCT---11B.10.000009
ORF1ab/nsp5A-B234A234GgCtgGt11B.10.000009
ORF1ab/nsp5A-B234A234NGCtAAt11B.10.000009
ORF1ab/nsp5A-B234A234del1gCtg-t11B.1.10.000018
ORF1ab/nsp5A-B234A234TGctAct11B.1.10.000018
ORF1ab/nsp5A-B234A234AgcTgcC11B.1.10.000018
ORF1ab/nsp5A-B234A234delGCT---11B.1.10.000018
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.100.001115
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.1410.002012
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.160.055556
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.1610.003534
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.1740.003378
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.1870.00885
ORF1ab/nsp5A-B234A234TGctAct11B.1.1.2140.000055
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2200.001859
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2290.005747
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2370.005405
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2430.004082
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2440.015385
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2550.00303
ORF1ab/nsp5A-B234A234SGctTct11B.1.1.2630.001558
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2720.005208
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2800.003086
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.2970.002237
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.3010.001179
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.3540.004386
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.3770.001381
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.3830.0625
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.4130.006897
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.440.00241
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.460.004367
ORF1ab/nsp5A-B234A234SGctTct11B.1.1.460.004367
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.4650.015625
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.4860.001577
ORF1ab/nsp5A-B234A234TGctAct11B.1.1.5260.003546
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.540.003021
ORF1ab/nsp5A-B234A234NGCtAAt11B.1.1.70.000001
ORF1ab/nsp5A-B234A234PGctCct11B.1.1.70.000001
ORF1ab/nsp5A-B234A234del2GCt--t11B.1.1.70.000001
ORF1ab/nsp5A-B234A234del1gcTgc-11B.1.1.70.000001
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.700.000341
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1.720.030303
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1260.001276
ORF1ab/nsp5A-B234A234SGctTct11B.1.1570.002985
ORF1ab/nsp5A-B234A234delGCT---11B.1.177.160.000664
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.200.001517
ORF1ab/nsp5A-B234A234SGctTct11B.1.177.210.000076
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.330.001645
ORF1ab/nsp5A-B234A234delGCT---11B.1.177.40.000211
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.420.000894
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.430.001477
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.520.001757
ORF1ab/nsp5A-B234A234TGctAct11B.1.177.550.002331
ORF1ab/nsp5A-B234A234delGCT---11B.1.177.60.000977
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.177.600.000218
ORF1ab/nsp5A-B234A234SGctTct11B.1.177.70.000165
ORF1ab/nsp5A-B234A234delGCT---11B.1.177.760.002494
ORF1ab/nsp5A-B234A234TGctAct11B.1.177.810.000189
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1890.004292
ORF1ab/nsp5A-B234A234DgCtgAt11B.1.1940.04
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.1950.005025
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.2060.000816
ORF1ab/nsp5A-B234A234del2gCTg--11B.1.2180.005155
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.2290.009709
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.2390.001221
ORF1ab/nsp5A-B234A234TGctAct11B.1.2400.000216
ORF1ab/nsp5A-B234A234AgcTgcG11B.1.2430.00007
ORF1ab/nsp5A-B234A234delGCT---11B.1.2580.000067
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.258.110.000396
ORF1ab/nsp5A-B234A234delGCT---11B.1.258.170.000104
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.258.30.001675
ORF1ab/nsp5A-B234A234TGctAct11B.1.258.70.001912
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3060.005714
ORF1ab/nsp5A-B234A234TGctAct11B.1.3110.000275
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3320.003497
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3490.000715
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3510.00003
ORF1ab/nsp5A-B234A234DgCtgAt11B.1.351.30.000876
ORF1ab/nsp5A-B234A234TGctAct11B.1.360.000146
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.36.100.004785
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.36.160.001425
ORF1ab/nsp5A-B234A234TGctAct11B.1.36.190.009259
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.36.220.001208
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.36.240.006173
ORF1ab/nsp5A-B234A234TGctAct11B.1.36.290.000517
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.36.360.000602
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3670.000792
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3690.000285
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3750.00082
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3900.010638
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.3970.004854
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4280.00102
ORF1ab/nsp5A-B234A234TGctAct11B.1.4290.000024
ORF1ab/nsp5A-B234A234SGctTct11B.1.4290.000024
ORF1ab/nsp5A-B234A234PGctCct11B.1.4290.000024
ORF1ab/nsp5A-B234A234AgcTgcC11B.1.4290.000024
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4330.003195
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4360.001029
ORF1ab/nsp5A-B234A234AgcTgcC11B.1.4410.009615
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4560.003268
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4660.023256
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4690.00361
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4800.002488
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.4990.00105
ORF1ab/nsp5A-B234A234AgcTgcG11B.1.5030.002488
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.5090.000866
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.5250.000113
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.5260.000024
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.5380.008065
ORF1ab/nsp5A-B234A234AgcTgcC11B.1.5580.004566
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.5740.002151
ORF1ab/nsp5A-B234A234YGCtTAt11B.1.5770.000687
ORF1ab/nsp5A-B234A234FGCtTTt11B.1.5770.000687
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.6000.005848
ORF1ab/nsp5A-B234A234AgcTgcC11B.1.6090.000479
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.6090.000479
ORF1ab/nsp5A-B234A234SGctTct11B.1.617.10.000129
ORF1ab/nsp5A-B234A234del1gcTgc-11B.1.617.20.000004
ORF1ab/nsp5A-B234A234delGCT---11B.1.617.20.000004
ORF1ab/nsp5A-B234A234GgCTgGC11B.1.617.20.000004
ORF1ab/nsp5A-B234A234SGctTct11B.1.6210.000089
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.6280.000352
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.6370.000073
ORF1ab/nsp5A-B234A234VgCtgTt11B.1.910.002075
ORF1ab/nsp5A-B234A234SGctTct11B.350.007812
ORF1ab/nsp5A-B234A234VgCtgTt11B.390.002331
ORF1ab/nsp5A-B234A234VgCtgTt11B.40.002208
ORF1ab/nsp5A-B234A234VgCtgTt11B.400.000364
ORF1ab/nsp5A-B234A234VgCtgTt11B.60.00091
ORF1ab/nsp5A-B234A234TGctAct11B.610.005747
ORF1ab/nsp5A-B234A234VgCtgTt11C.160.00106
ORF1ab/nsp5A-B234A234VgCtgTt11C.2.10.006667
ORF1ab/nsp5A-B234A234VgCtgTt11C.360.000911
ORF1ab/nsp5A-B234A234VgCtgTt11D.20.000075
ORF1ab/nsp5A-B234A234GgCtgGt11D.20.000075
ORF1ab/nsp5A-B234A234SGctTct11D.30.005917
ORF1ab/nsp5A-B234A234VgCtgTt11N.20.038462
ORF1ab/nsp5A-B234A234delGCT---11N.40.004255
ORF1ab/nsp5A-B234A234VgCtgTt11P.1.130.000898
ORF1ab/nsp5A-B234A234TGctAct11P.1.150.000232
ORF1ab/nsp5A-B234A234TGctAct11Q.10.000126
ORF1ab/nsp5A-B234A234VgCtgTt11Q.30.000145
ORF1ab/nsp5A-B234A234VgCtgTt11Q.80.000165