CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 229

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B229D229DD3492DsyngaCgaT1226812268110739-10741
ORF1ab/nsp5A-B229D229ED3492EnonsyngaCgaA1461410.96575310739-10741
ORF1ab/nsp5A-B229D229ED3492EnonsyngaCgaG14650.034246610739-10741
ORF1ab/nsp5A-B229D229delD3492deldelGAC---4646110739-10741
ORF1ab/nsp5A-B229D229YD3492YnonsynGacTac37320.86486510739-10741
ORF1ab/nsp5A-B229D229YD3492YnonsynGaCTaT3750.13513510739-10741
ORF1ab/nsp5A-B229D229ND3492NnonsynGacAac28160.57142910739-10741
ORF1ab/nsp5A-B229D229ND3492NnonsynGaCAaT28120.42857110739-10741
ORF1ab/nsp5A-B229D229HD3492HnonsynGacCac1090.910739-10741
ORF1ab/nsp5A-B229D229HD3492HnonsynGaCCaT1010.110739-10741
ORF1ab/nsp5A-B229D229ID3492InonsynGAcATc940.44444410739-10741
ORF1ab/nsp5A-B229D229ID3492InonsynGACATA930.33333310739-10741
ORF1ab/nsp5A-B229D229ID3492InonsynGACATT920.22222210739-10741
ORF1ab/nsp5A-B229D229VD3492VnonsyngAcgTc850.62510739-10741
ORF1ab/nsp5A-B229D229VD3492VnonsyngACgTA820.2510739-10741
ORF1ab/nsp5A-B229D229VD3492VnonsyngACgTT810.12510739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGACTTA720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGACCTA720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGAcCTc720.28571410739-10741
ORF1ab/nsp5A-B229D229LD3492LnonsynGACCTT710.14285710739-10741
ORF1ab/nsp5A-B229D229FD3492FnonsynGAcTTc640.66666710739-10741
ORF1ab/nsp5A-B229D229TD3492TnonsynGACACT620.33333310739-10741
ORF1ab/nsp5A-B229D229FD3492FnonsynGACTTT620.33333310739-10741
ORF1ab/nsp5A-B229D229SD3492SnonsynGACTCT620.33333310739-10741
ORF1ab/nsp5A-B229D229SD3492SnonsynGAcTCc620.33333310739-10741
ORF1ab/nsp5A-B229D229SD3492SnonsynGACTCA620.33333310739-10741
ORF1ab/nsp5A-B229D229TD3492TnonsynGAcACc620.33333310739-10741
ORF1ab/nsp5A-B229D229TD3492TnonsynGACACA620.33333310739-10741
ORF1ab/nsp5A-B229D229KD3492KnonsynGaCAaA55110739-10741
ORF1ab/nsp5A-B229D229XD3492XnonsynGaCTaA44110739-10741
ORF1ab/nsp5A-B229D229PD3492PnonsynGACCCT310.33333310739-10741
ORF1ab/nsp5A-B229D229PD3492PnonsynGAcCCc310.33333310739-10741
ORF1ab/nsp5A-B229D229PD3492PnonsynGACCCA310.33333310739-10741
ORF1ab/nsp5A-B229D229AD3492AnonsyngACgCT310.33333310739-10741
ORF1ab/nsp5A-B229D229AD3492AnonsyngAcgCc310.33333310739-10741
ORF1ab/nsp5A-B229D229AD3492AnonsyngACgCA310.33333310739-10741
ORF1ab/nsp5A-B229D229QD3492QnonsynGaCCaA22110739-10741
ORF1ab/nsp5A-B229D229GD3492GnonsyngAcgGc22110739-10741

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B229D229DgaCgaT1226812268All0.002346
ORF1ab/nsp5A-B229D229DgaCgaT75397539B.1.2430.524598
ORF1ab/nsp5A-B229D229DgaCgaT984984B.1.1.70.000881
ORF1ab/nsp5A-B229D229DgaCgaT568568AY.40.000884
ORF1ab/nsp5A-B229D229DgaCgaT321321AY.1030.001993
ORF1ab/nsp5A-B229D229DgaCgaT319319B.10.002922
ORF1ab/nsp5A-B229D229DgaCgaT316316AY.900.21629
ORF1ab/nsp5A-B229D229DgaCgaT223223B.1.20.001964
ORF1ab/nsp5A-B229D229DgaCgaT189189B.1.617.20.000712
ORF1ab/nsp5A-B229D229EgaCgaA141146All0.000027
ORF1ab/nsp5A-B229D229EgaCgaG5146All0.000001
ORF1ab/nsp5A-B229D229DgaCgaT141141AY.430.000625
ORF1ab/nsp5A-B229D229DgaCgaT9696B.1.351.20.029047
ORF1ab/nsp5A-B229D229DgaCgaT7878AY.250.000469
ORF1ab/nsp5A-B229D229EgaCgaA7777B.1.3110.021142
ORF1ab/nsp5A-B229D229DgaCgaT6161B.1.1770.000803
ORF1ab/nsp5A-B229D229DgaCgaT6161P.10.000961
ORF1ab/nsp5A-B229D229DgaCgaT5858B.1.1.5190.002303
ORF1ab/nsp5A-B229D229DgaCgaT5656AY.30.000557
ORF1ab/nsp5A-B229D229DgaCgaT5555B.1.1.280.017118
ORF1ab/nsp5A-B229D229delGAC---4646All0.000009
ORF1ab/nsp5A-B229D229DgaCgaT4646B.1.1.4660.4
ORF1ab/nsp5A-B229D229DgaCgaT4444AY.440.000268
ORF1ab/nsp5A-B229D229DgaCgaT3838AY.1000.001748
ORF1ab/nsp5A-B229D229YGacTac3237All0.000006
ORF1ab/nsp5A-B229D229YGaCTaT537All0.000001
ORF1ab/nsp5A-B229D229DgaCgaT3737AY.9.10.003098
ORF1ab/nsp5A-B229D229DgaCgaT3636AY.46.60.002599
ORF1ab/nsp5A-B229D229DgaCgaT3535B.1.3990.067698
ORF1ab/nsp5A-B229D229DgaCgaT3434B.1.10.000617
ORF1ab/nsp5A-B229D229DgaCgaT3434B.1.1600.00106
ORF1ab/nsp5A-B229D229DgaCgaT3131AY.39.10.001228
ORF1ab/nsp5A-B229D229NGacAac1628All0.000003
ORF1ab/nsp5A-B229D229NGaCAaT1228All0.000002
ORF1ab/nsp5A-B229D229DgaCgaT2727B.1.177.320.036437
ORF1ab/nsp5A-B229D229DgaCgaT2626B.1.3510.000773
ORF1ab/nsp5A-B229D229DgaCgaT2121AY.1020.000557
ORF1ab/nsp5A-B229D229DgaCgaT2020B.1.5260.00047
ORF1ab/nsp5A-B229D229DgaCgaT2020B.1.5960.001743
ORF1ab/nsp5A-B229D229DgaCgaT1919AY.390.00047
ORF1ab/nsp5A-B229D229DgaCgaT1818C.370.002089
ORF1ab/nsp5A-B229D229delGAC---1717B.1.1.70.000015
ORF1ab/nsp5A-B229D229DgaCgaT1616B.1.177.600.003495
ORF1ab/nsp5A-B229D229DgaCgaT1616B.1.4290.000376
ORF1ab/nsp5A-B229D229DgaCgaT1515A.2.50.007485
ORF1ab/nsp5A-B229D229DgaCgaT1515AY.260.000425
ORF1ab/nsp5A-B229D229DgaCgaT1515AY.4.20.000325
ORF1ab/nsp5A-B229D229YGacTac1314B.10.000119
ORF1ab/nsp5A-B229D229YGaCTaT114B.10.000009
ORF1ab/nsp5A-B229D229DgaCgaT1313B.1.5950.003392
ORF1ab/nsp5A-B229D229DgaCgaT1212AY.1130.001709
ORF1ab/nsp5A-B229D229DgaCgaT1212AY.290.000189
ORF1ab/nsp5A-B229D229NGacAac1112B.10.000101
ORF1ab/nsp5A-B229D229NGaCAaT112B.10.000009
ORF1ab/nsp5A-B229D229DgaCgaT1111AY.200.000428
ORF1ab/nsp5A-B229D229DgaCgaT1111B.1.1.2220.002244
ORF1ab/nsp5A-B229D229EgaCgaA1111B.1.1.70.00001
ORF1ab/nsp5A-B229D229HGacCac910All0.000002
ORF1ab/nsp5A-B229D229HGaCCaT110All0
ORF1ab/nsp5A-B229D229DgaCgaT1010AY.420.000402
ORF1ab/nsp5A-B229D229DgaCgaT1010AY.50.000206
ORF1ab/nsp5A-B229D229EgaCgaA1010AY.98.10.000484
ORF1ab/nsp5A-B229D229DgaCgaT1010B.1.4700.014045
ORF1ab/nsp5A-B229D229IGAcATc49All0.000001
ORF1ab/nsp5A-B229D229IGACATA39All0.000001
ORF1ab/nsp5A-B229D229IGACATT29All0
ORF1ab/nsp5A-B229D229DgaCgaT99AY.330.000601
ORF1ab/nsp5A-B229D229DgaCgaT99AY.750.000504
ORF1ab/nsp5A-B229D229DgaCgaT99AY.90.000608
ORF1ab/nsp5A-B229D229DgaCgaT99AY.940.003984
ORF1ab/nsp5A-B229D229DgaCgaT99B.1.1.2140.000499
ORF1ab/nsp5A-B229D229DgaCgaT99B.1.2340.001187
ORF1ab/nsp5A-B229D229VgAcgTc58All0.000001
ORF1ab/nsp5A-B229D229VgACgTA28All0
ORF1ab/nsp5A-B229D229VgACgTT18All0
ORF1ab/nsp5A-B229D229DgaCgaT88B0.001022
ORF1ab/nsp5A-B229D229DgaCgaT88B.1.3850.085106
ORF1ab/nsp5A-B229D229DgaCgaT88B.1.5770.005498
ORF1ab/nsp5A-B229D229DgaCgaT88P.1.150.001859
ORF1ab/nsp5A-B229D229DgaCgaT88Q.80.001319
ORF1ab/nsp5A-B229D229LGAcCTc27All0
ORF1ab/nsp5A-B229D229LGACCTA27All0
ORF1ab/nsp5A-B229D229LGACTTA27All0
ORF1ab/nsp5A-B229D229LGACCTT17All0
ORF1ab/nsp5A-B229D229DgaCgaT77AY.1180.000439
ORF1ab/nsp5A-B229D229EgaCgaA77AY.330.000467
ORF1ab/nsp5A-B229D229YGacTac57B.1.10.000091
ORF1ab/nsp5A-B229D229YGaCTaT27B.1.10.000036
ORF1ab/nsp5A-B229D229DgaCgaT77B.1.177.730.003964
ORF1ab/nsp5A-B229D229EgaCgaA77B.1.20.000062
ORF1ab/nsp5A-B229D229DgaCgaT77B.1.466.20.002739
ORF1ab/nsp5A-B229D229DgaCgaT77B.1.5510.009032
ORF1ab/nsp5A-B229D229FGAcTTc46All0.000001
ORF1ab/nsp5A-B229D229SGAcTCc26All0
ORF1ab/nsp5A-B229D229TGACACA26All0
ORF1ab/nsp5A-B229D229TGACACT26All0
ORF1ab/nsp5A-B229D229TGAcACc26All0
ORF1ab/nsp5A-B229D229SGACTCT26All0
ORF1ab/nsp5A-B229D229FGACTTT26All0
ORF1ab/nsp5A-B229D229SGACTCA26All0
ORF1ab/nsp5A-B229D229DgaCgaT66AY.1190.000212
ORF1ab/nsp5A-B229D229DgaCgaT66AY.3.10.000512
ORF1ab/nsp5A-B229D229NGaCAaT66AY.750.000336
ORF1ab/nsp5A-B229D229TGACACT26B.1.10.000036
ORF1ab/nsp5A-B229D229TGAcACc26B.1.10.000036
ORF1ab/nsp5A-B229D229TGACACA26B.1.10.000036
ORF1ab/nsp5A-B229D229IGAcATc26B.1.10.000036
ORF1ab/nsp5A-B229D229SGACTCA26B.1.10.000036
ORF1ab/nsp5A-B229D229SGAcTCc26B.1.10.000036
ORF1ab/nsp5A-B229D229SGACTCT26B.1.10.000036
ORF1ab/nsp5A-B229D229IGACATA26B.1.10.000036
ORF1ab/nsp5A-B229D229IGACATT26B.1.10.000036
ORF1ab/nsp5A-B229D229DgaCgaT66B.1.2410.00487
ORF1ab/nsp5A-B229D229DgaCgaT66B.1.2580.000399
ORF1ab/nsp5A-B229D229DgaCgaT66B.1.4270.000303
ORF1ab/nsp5A-B229D229DgaCgaT66B.1.6370.000438
ORF1ab/nsp5A-B229D229KGaCAaA55All0.000001
ORF1ab/nsp5A-B229D229DgaCgaT55AY.1090.003698
ORF1ab/nsp5A-B229D229DgaCgaT55AY.1200.000186
ORF1ab/nsp5A-B229D229DgaCgaT55AY.230.000349
ORF1ab/nsp5A-B229D229delGAC---55AY.40.000008
ORF1ab/nsp5A-B229D229EgaCgaG35AY.40.000005
ORF1ab/nsp5A-B229D229EgaCgaA25AY.40.000003
ORF1ab/nsp5A-B229D229DgaCgaT55AY.450.000608
ORF1ab/nsp5A-B229D229DgaCgaT55AY.5.30.001687
ORF1ab/nsp5A-B229D229DgaCgaT55AY.540.000477
ORF1ab/nsp5A-B229D229DgaCgaT55AY.700.001043
ORF1ab/nsp5A-B229D229DgaCgaT55AY.9.20.000184
ORF1ab/nsp5A-B229D229LGACTTA25B.1.10.000036
ORF1ab/nsp5A-B229D229LGAcCTc15B.1.10.000018
ORF1ab/nsp5A-B229D229LGACCTA15B.1.10.000018
ORF1ab/nsp5A-B229D229LGACCTT15B.1.10.000018
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.1.2390.16129
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.1.4340.001743
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.1390.003666
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.3960.003529
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.6020.03268
ORF1ab/nsp5A-B229D229DgaCgaT55B.1.6210.000443
ORF1ab/nsp5A-B229D229DgaCgaT55P.20.000933
ORF1ab/nsp5A-B229D229XGaCTaA44All0.000001
ORF1ab/nsp5A-B229D229DgaCgaT44AY.10.001583
ORF1ab/nsp5A-B229D229EgaCgaA44AY.1020.000106
ORF1ab/nsp5A-B229D229DgaCgaT44AY.34.10.00204
ORF1ab/nsp5A-B229D229DgaCgaT44AY.4.50.00043
ORF1ab/nsp5A-B229D229DgaCgaT44AY.610.000419
ORF1ab/nsp5A-B229D229DgaCgaT44AY.720.005442
ORF1ab/nsp5A-B229D229DgaCgaT44AY.740.000463
ORF1ab/nsp5A-B229D229DgaCgaT44AY.810.007968
ORF1ab/nsp5A-B229D229FGACTTT24B.1.10.000036
ORF1ab/nsp5A-B229D229VgAcgTc24B.1.10.000036
ORF1ab/nsp5A-B229D229FGAcTTc24B.1.10.000036
ORF1ab/nsp5A-B229D229NGacAac24B.1.10.000036
ORF1ab/nsp5A-B229D229NGaCAaT24B.1.10.000036
ORF1ab/nsp5A-B229D229VgACgTA14B.1.10.000018
ORF1ab/nsp5A-B229D229VgACgTT14B.1.10.000018
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.1.1530.004381
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.1.3170.001647
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.1.3230.056338
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.1.3520.125
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.1.390.002039
ORF1ab/nsp5A-B229D229YGacTac44B.1.1.70.000004
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.2400.000862
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.360.000584
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.5170.001708
ORF1ab/nsp5A-B229D229DgaCgaT44B.1.6230.002146
ORF1ab/nsp5A-B229D229DgaCgaT44B.230.011696
ORF1ab/nsp5A-B229D229DgaCgaT44C.40.04
ORF1ab/nsp5A-B229D229DgaCgaT44P.1.20.004624
ORF1ab/nsp5A-B229D229AgAcgCc13All0
ORF1ab/nsp5A-B229D229AgACgCT13All0
ORF1ab/nsp5A-B229D229PGACCCT13All0
ORF1ab/nsp5A-B229D229AgACgCA13All0
ORF1ab/nsp5A-B229D229PGACCCA13All0
ORF1ab/nsp5A-B229D229PGAcCCc13All0
ORF1ab/nsp5A-B229D229DgaCgaT33AY.1010.001471
ORF1ab/nsp5A-B229D229delGAC---33AY.4.50.000322
ORF1ab/nsp5A-B229D229DgaCgaT33AY.460.000312
ORF1ab/nsp5A-B229D229DgaCgaT33AY.530.000863
ORF1ab/nsp5A-B229D229DgaCgaT33AY.930.000819
ORF1ab/nsp5A-B229D229VgAcgTc23B.10.000018
ORF1ab/nsp5A-B229D229IGAcATc23B.10.000018
ORF1ab/nsp5A-B229D229VgACgTA13B.10.000009
ORF1ab/nsp5A-B229D229IGACATA13B.10.000009
ORF1ab/nsp5A-B229D229HGacCac23B.1.10.000036
ORF1ab/nsp5A-B229D229AgAcgCc13B.1.10.000018
ORF1ab/nsp5A-B229D229AgACgCT13B.1.10.000018
ORF1ab/nsp5A-B229D229PGACCCT13B.1.10.000018
ORF1ab/nsp5A-B229D229HGaCCaT13B.1.10.000018
ORF1ab/nsp5A-B229D229PGACCCA13B.1.10.000018
ORF1ab/nsp5A-B229D229PGAcCCc13B.1.10.000018
ORF1ab/nsp5A-B229D229AgACgCA13B.1.10.000018
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.1.1590.014019
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.1.1760.001318
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.1.4640.004418
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.1.5230.004687
ORF1ab/nsp5A-B229D229HGacCac33B.1.1.70.000003
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.1100.013575
ORF1ab/nsp5A-B229D229delGAC---33B.1.1770.00004
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.177.860.00055
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.258.170.000312
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.2980.006342
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.3060.017143
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.3290.001823
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.4800.007463
ORF1ab/nsp5A-B229D229DgaCgaT33B.1.4990.003151
ORF1ab/nsp5A-B229D229EgaCgaA33B.1.617.20.000011
ORF1ab/nsp5A-B229D229DgaCgaT33B.350.023438
ORF1ab/nsp5A-B229D229DgaCgaT33C.160.003181
ORF1ab/nsp5A-B229D229DgaCgaT33N.50.0053
ORF1ab/nsp5A-B229D229DgaCgaT33P.1.140.000143
ORF1ab/nsp5A-B229D229delGAC---220.111111
ORF1ab/nsp5A-B229D229QGaCCaA22All0
ORF1ab/nsp5A-B229D229GgAcgGc22All0
ORF1ab/nsp5A-B229D229DgaCgaT22AY.1050.001286
ORF1ab/nsp5A-B229D229DgaCgaT22AY.1170.000169
ORF1ab/nsp5A-B229D229DgaCgaT22AY.1210.000271
ORF1ab/nsp5A-B229D229DgaCgaT22AY.160.000759
ORF1ab/nsp5A-B229D229DgaCgaT22AY.16.10.00094
ORF1ab/nsp5A-B229D229EgaCgaA22AY.250.000012
ORF1ab/nsp5A-B229D229DgaCgaT22AY.29.10.000441
ORF1ab/nsp5A-B229D229DgaCgaT22AY.320.001065
ORF1ab/nsp5A-B229D229DgaCgaT22AY.360.000296
ORF1ab/nsp5A-B229D229EgaCgaA22AY.390.000049
ORF1ab/nsp5A-B229D229YGacTac22AY.40.000003
ORF1ab/nsp5A-B229D229EgaCgaA22AY.440.000012
ORF1ab/nsp5A-B229D229DgaCgaT22AY.470.000062
ORF1ab/nsp5A-B229D229DgaCgaT22AY.600.001876
ORF1ab/nsp5A-B229D229DgaCgaT22AY.980.000158
ORF1ab/nsp5A-B229D229HGacCac22B.10.000018
ORF1ab/nsp5A-B229D229KGaCAaA22B.10.000018
ORF1ab/nsp5A-B229D229EgaCgaA22B.10.000018
ORF1ab/nsp5A-B229D229LGACCTA12B.10.000009
ORF1ab/nsp5A-B229D229LGAcCTc12B.10.000009
ORF1ab/nsp5A-B229D229EgaCgaA22B.1.10.000036
ORF1ab/nsp5A-B229D229KGaCAaA22B.1.10.000036
ORF1ab/nsp5A-B229D229XGaCTaA22B.1.10.000036
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.1980.002937
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.2000.014925
ORF1ab/nsp5A-B229D229EgaCgaA22B.1.1.2140.000111
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.2160.001781
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.250.001137
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.3060.000877
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.3120.003824
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.3180.000604
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.370.000386
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1.4200.002012
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.177.500.00939
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.1990.008264
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.2190.018868
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.2210.000142
ORF1ab/nsp5A-B229D229EgaCgaA22B.1.2790.001027
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.3110.000549
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.3360.004878
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.3690.00057
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.438.10.000215
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.4970.00063
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.5250.000226
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.5440.012048
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.5610.000794
ORF1ab/nsp5A-B229D229DgaCgaT22B.1.5750.000607
ORF1ab/nsp5A-B229D229NGaCAaT12B.1.6270.00202
ORF1ab/nsp5A-B229D229YGacTac12B.1.6270.00202
ORF1ab/nsp5A-B229D229YGaCTaT12B.1.6270.00202
ORF1ab/nsp5A-B229D229NGacAac12B.1.6270.00202
ORF1ab/nsp5A-B229D229DgaCgaT22D.20.00015
ORF1ab/nsp5A-B229D229DgaCgaT22P.1.170.000324
ORF1ab/nsp5A-B229D229DgaCgaT11A0.000387
ORF1ab/nsp5A-B229D229DgaCgaT11AL.10.012987
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1060.000335
ORF1ab/nsp5A-B229D229EgaCgaG11AY.1060.000335
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1070.000466
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1080.001103
ORF1ab/nsp5A-B229D229EgaCgaA11AY.1100.000113
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1100.000113
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1110.000183
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1140.000231
ORF1ab/nsp5A-B229D229DgaCgaT11AY.1160.000287
ORF1ab/nsp5A-B229D229EgaCgaA11AY.1190.000035
ORF1ab/nsp5A-B229D229DgaCgaT11AY.120.000316
ORF1ab/nsp5A-B229D229delGAC---11AY.1200.000037
ORF1ab/nsp5A-B229D229DgaCgaT11AY.120.10.000321
ORF1ab/nsp5A-B229D229DgaCgaT11AY.240.000431
ORF1ab/nsp5A-B229D229delGAC---11AY.250.000006
ORF1ab/nsp5A-B229D229DgaCgaT11AY.280.00189
ORF1ab/nsp5A-B229D229EgaCgaG11AY.30.00001
ORF1ab/nsp5A-B229D229HGacCac11AY.30.00001
ORF1ab/nsp5A-B229D229DgaCgaT11AY.300.000396
ORF1ab/nsp5A-B229D229DgaCgaT11AY.380.000499
ORF1ab/nsp5A-B229D229DgaCgaT11AY.4.40.000409
ORF1ab/nsp5A-B229D229delGAC---11AY.430.000004
ORF1ab/nsp5A-B229D229YGaCTaT11AY.46.20.000635
ORF1ab/nsp5A-B229D229DgaCgaT11AY.46.40.000165
ORF1ab/nsp5A-B229D229DgaCgaT11AY.46.50.000198
ORF1ab/nsp5A-B229D229YGacTac11AY.50.000021
ORF1ab/nsp5A-B229D229DgaCgaT11AY.580.000907
ORF1ab/nsp5A-B229D229DgaCgaT11AY.60.000041
ORF1ab/nsp5A-B229D229DgaCgaT11AY.650.000533
ORF1ab/nsp5A-B229D229DgaCgaT11AY.660.00107
ORF1ab/nsp5A-B229D229DgaCgaT11AY.710.000475
ORF1ab/nsp5A-B229D229DgaCgaT11AY.75.10.00018
ORF1ab/nsp5A-B229D229delGAC---11AY.810.001992
ORF1ab/nsp5A-B229D229DgaCgaT11AY.840.000437
ORF1ab/nsp5A-B229D229HGacCac11AY.860.00083
ORF1ab/nsp5A-B229D229DgaCgaT11AY.880.000884
ORF1ab/nsp5A-B229D229delGAC---11AY.90.000068
ORF1ab/nsp5A-B229D229DgaCgaT11AY.920.000287
ORF1ab/nsp5A-B229D229DgaCgaT11AY.960.002075
ORF1ab/nsp5A-B229D229DgaCgaT11AY.99.10.001553
ORF1ab/nsp5A-B229D229EgaCgaA11B0.000128
ORF1ab/nsp5A-B229D229XGaCTaA11B.10.000009
ORF1ab/nsp5A-B229D229delGAC---11B.10.000009
ORF1ab/nsp5A-B229D229GgAcgGc11B.10.000009
ORF1ab/nsp5A-B229D229QGaCCaA11B.10.000009
ORF1ab/nsp5A-B229D229QGaCCaA11B.1.10.000018
ORF1ab/nsp5A-B229D229delGAC---11B.1.10.000018
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.10.000327
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.1140.066667
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.1610.003534
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2030.016949
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2090.008929
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2100.005714
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2940.001266
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.2980.000862
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.3350.012987
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.3690.000446
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.3740.002375
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.3970.002252
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.40.002976
ORF1ab/nsp5A-B229D229EgaCgaA11B.1.1.5190.00004
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.5260.003546
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.630.000386
ORF1ab/nsp5A-B229D229NGaCAaT11B.1.1.70.000001
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1.980.018519
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1110.001175
ORF1ab/nsp5A-B229D229YGacTac11B.1.1600.000031
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1670.007812
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1690.014925
ORF1ab/nsp5A-B229D229NGacAac11B.1.1770.000013
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.100.000878
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.150.000631
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.160.000664
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.210.000076
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.40.000211
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.420.000894
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.430.001477
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.440.000519
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.460.000918
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.570.000281
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.60.000977
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.620.001192
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.680.015152
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.70.000165
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.750.001041
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.760.002494
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.177.770.000726
ORF1ab/nsp5A-B229D229GgAcgGc11B.1.177.810.000189
ORF1ab/nsp5A-B229D229delGAC---11B.1.177.870.000728
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1890.004292
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.1920.009259
ORF1ab/nsp5A-B229D229YGacTac11B.1.20.000009
ORF1ab/nsp5A-B229D229YGacTac11B.1.2060.000816
ORF1ab/nsp5A-B229D229FGAcTTc11B.1.2210.000071
ORF1ab/nsp5A-B229D229YGacTac11B.1.2210.000071
ORF1ab/nsp5A-B229D229VgAcgTc11B.1.2210.000071
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.2290.009709
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.243.10.022222
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.2470.014925
ORF1ab/nsp5A-B229D229delGAC---11B.1.2580.000067
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.258.140.00098
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.258.30.001675
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.3240.001605
ORF1ab/nsp5A-B229D229YGacTac11B.1.3500.002933
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.351.10.038462
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.351.30.000876
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.3560.001727
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.36.240.006173
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.36.290.000517
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.36.380.001642
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.36.70.004
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.36.80.001
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.3890.001002
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.390.003906
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.3950.007042
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4000.000429
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4080.00369
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4090.000781
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4160.001269
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4260.001009
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4360.001029
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.4620.007246
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5450.014493
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5600.00463
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5640.000426
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5670.003333
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5680.001111
ORF1ab/nsp5A-B229D229FGAcTTc11B.1.5770.000687
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.5880.00091
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6050.005952
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6100.003546
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.617.10.000129
ORF1ab/nsp5A-B229D229delGAC---11B.1.617.20.000004
ORF1ab/nsp5A-B229D229NGaCAaT11B.1.617.20.000004
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.619.10.000641
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6200.000946
ORF1ab/nsp5A-B229D229EgaCgaA11B.1.6210.000089
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6270.00202
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6280.000352
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6310.003367
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.6320.006711
ORF1ab/nsp5A-B229D229DgaCgaT11B.1.90.006173
ORF1ab/nsp5A-B229D229DgaCgaT11B.550.00295
ORF1ab/nsp5A-B229D229DgaCgaT11C.10.002392
ORF1ab/nsp5A-B229D229DgaCgaT11C.230.005814
ORF1ab/nsp5A-B229D229DgaCgaT11C.360.000911
ORF1ab/nsp5A-B229D229YGacTac11K.10.02381
ORF1ab/nsp5A-B229D229XGaCTaA11K.10.02381
ORF1ab/nsp5A-B229D229EgaCgaA11K.10.02381
ORF1ab/nsp5A-B229D229KGaCAaA11K.10.02381
ORF1ab/nsp5A-B229D229NGacAac11K.10.02381
ORF1ab/nsp5A-B229D229delGAC---11N.40.004255
ORF1ab/nsp5A-B229D229DgaCgaT11P.1.160.000374
ORF1ab/nsp5A-B229D229DgaCgaT11Q.20.000613
ORF1ab/nsp5A-B229D229DgaCgaT11Q.70.001111
ORF1ab/nsp5A-B229D229DgaCgaT11R.10.00009