CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp5A-B | 228 | N228N | N3491N | syn | aaT | aaC | 950 | 950 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228S | N3491S | nonsyn | aAt | aGt | 321 | 321 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228K | N3491K | nonsyn | aaT | aaA | 142 | 112 | 0.788732 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228K | N3491K | nonsyn | aaT | aaG | 142 | 30 | 0.211268 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228del | N3491del | del | AAT | --- | 45 | 45 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228T | N3491T | nonsyn | aAt | aCt | 24 | 24 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228Y | N3491Y | nonsyn | Aat | Tat | 23 | 23 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228D | N3491D | nonsyn | Aat | Gat | 4 | 4 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228I | N3491I | nonsyn | aAt | aTt | 4 | 4 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228del1 | N3491del1 | del | Aat | -at | 4 | 3 | 0.75 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228del1 | N3491del1 | del | AAt | -Gt | 4 | 1 | 0.25 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228H | N3491H | nonsyn | Aat | Cat | 2 | 2 | 1 | 10736-10738 |
ORF1ab/nsp5A-B | 228 | N228del2 | N3491del2 | del | aAT | a-- | 1 | 1 | 1 | 10736-10738 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 950 | 950 | All | 0.000182 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 424 | 424 | AY.4 | 0.00066 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 342 | 342 | B.1.1.7 | 0.000306 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 321 | 321 | All | 0.000061 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 112 | 142 | All | 0.000021 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 30 | 142 | All | 0.000006 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 140 | 140 | B.1.544 | 0.843373 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 66 | 66 | AY.33 | 0.004407 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 45 | 45 | All | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 38 | 42 | B.1.177 | 0.0005 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 4 | 42 | B.1.177 | 0.000053 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 32 | 32 | B.1 | 0.000293 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 31 | 31 | B.1.2 | 0.000273 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 22 | 29 | B.1.1.7 | 0.00002 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 7 | 29 | B.1.1.7 | 0.000006 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 24 | 24 | All | 0.000005 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 23 | 23 | All | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 20 | 20 | AY.44 | 0.000122 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 19 | 19 | AY.61 | 0.001991 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 17 | 17 | AY.39.1 | 0.000673 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 16 | 16 | B.1.1.7 | 0.000014 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 16 | 16 | B.1.429 | 0.000376 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 11 | 11 | AY.118 | 0.000689 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 11 | 11 | B.1.177.81 | 0.002083 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 10 | 10 | B.1.617.2 | 0.000038 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 9 | 9 | AY.25 | 0.000054 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 6 | 6 | AY.103 | 0.000037 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 6 | 6 | AY.44 | 0.000037 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 6 | 6 | AY.5.4 | 0.00166 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 5 | 5 | AY.4 | 0.000008 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 5 | 5 | B.1.1 | 0.000091 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 5 | 5 | B.1.1 | 0.000091 |
ORF1ab/nsp5A-B | 228 | N228I | aAt | aTt | 4 | 4 | All | 0.000001 |
ORF1ab/nsp5A-B | 228 | N228D | Aat | Gat | 4 | 4 | All | 0.000001 |
ORF1ab/nsp5A-B | 228 | N228del1 | Aat | -at | 3 | 4 | All | 0.000001 |
ORF1ab/nsp5A-B | 228 | N228del1 | AAt | -Gt | 1 | 4 | All | 0 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 4 | 4 | B.1.1.7 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 4 | 4 | B.1.596 | 0.000349 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 3 | 3 | AY.4.5 | 0.000322 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 3 | 3 | B | 0.000383 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp5A-B | 228 | N228I | aAt | aTt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 2 | 2 | 0.111111 | |
ORF1ab/nsp5A-B | 228 | N228H | Aat | Cat | 2 | 2 | All | 0 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | AY.10 | 0.00106 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | AY.29 | 0.000032 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | AY.48 | 0.00093 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | B.1.1.351 | 0.005587 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp5A-B | 228 | N228H | Aat | Cat | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 1 | 2 | B.1.139 | 0.000733 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 2 | B.1.139 | 0.000733 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 2 | 2 | B.1.237 | 0.00995 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp5A-B | 228 | N228del2 | aAT | a-- | 1 | 1 | All | 0 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp5A-B | 228 | N228D | Aat | Gat | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp5A-B | 228 | N228D | Aat | Gat | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp5A-B | 228 | N228del1 | Aat | -at | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaG | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | AY.94 | 0.000443 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B | 0.000128 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228D | Aat | Gat | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp5A-B | 228 | N228del1 | Aat | -at | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp5A-B | 228 | N228del2 | aAT | a-- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp5A-B | 228 | N228D | Aat | Gat | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.131 | 0.008772 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp5A-B | 228 | N228del1 | AAt | -Gt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228Y | Aat | Tat | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.350 | 0.002933 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.416 | 0.001269 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | B.1.590 | 0.004545 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228I | aAt | aTt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp5A-B | 228 | N228N | aaT | aaC | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp5A-B | 228 | N228del1 | Aat | -at | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp5A-B | 228 | N228T | aAt | aCt | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp5A-B | 228 | N228S | aAt | aGt | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | K.1 | 0.02381 |
ORF1ab/nsp5A-B | 228 | N228del | AAT | --- | 1 | 1 | N.4 | 0.004255 |
ORF1ab/nsp5A-B | 228 | N228K | aaT | aaA | 1 | 1 | Q.1 | 0.000126 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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