CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp5A-B : CodonNum = 21 & Codon = Gct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp5A-B21T21AT3284AnonsynActGct7575110115-10117

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp5A-B21T21AActGct7575All0.000014
ORF1ab/nsp5A-B21T21AActGct3131B.1.1.70.000028
ORF1ab/nsp5A-B21T21AActGct1010AY.50.000206
ORF1ab/nsp5A-B21T21AActGct88AY.470.000249
ORF1ab/nsp5A-B21T21AActGct55B.1.1.2940.006329
ORF1ab/nsp5A-B21T21AActGct44AY.9.10.000335
ORF1ab/nsp5A-B21T21AActGct22AY.250.000012
ORF1ab/nsp5A-B21T21AActGct22AY.40.000003
ORF1ab/nsp5A-B21T21AActGct22B.1.10.000036
ORF1ab/nsp5A-B21T21AActGct22B.1.1.3260.003521
ORF1ab/nsp5A-B21T21AActGct22B.1.617.20.000008
ORF1ab/nsp5A-B21T21AActGct11A.2.50.000499
ORF1ab/nsp5A-B21T21AActGct11AY.1020.000027
ORF1ab/nsp5A-B21T21AActGct11AY.4.20.000022
ORF1ab/nsp5A-B21T21AActGct11AY.430.000004
ORF1ab/nsp5A-B21T21AActGct11B0.000128
ORF1ab/nsp5A-B21T21AActGct11B.1.177.410.0025
ORF1ab/nsp5A-B21T21AActGct11B.60.00091